FFCP PHASE1:Mm9::chr8:107694628..107694659,+: Difference between revisions
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{{FFCP|EntrezGene=12400|HGNC=|MCL_coexpression_id=806|UniProt=Q08024|association_with_transcript=54bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end|description=CAGE_peak_1_at_Cbfb_5end|id=chr8:107694628..107694659,+|ontology_enrichment_celltype=CL:0000838!1.83e-08!12;CL:0000542!1.92e-08!13;CL:0000051!1.92e-08!13;CL:0000084!7.65e-08!11;CL:0000827!7.65e-08!11;CL:0000988!2.08e-07!32;CL:0002032!2.08e-07!32;CL:0000037!2.08e-07!32;CL:0000566!2.08e-07!32;CL:0000837!2.08e-07!32|ontology_enrichment_celltype_v019_2=CL:0000838,1.83e-08,12;CL:0000542,1.92e-08,13;CL:0000051,1.92e-08,13;CL:0000084,7.65e-08,11;CL:0000827,7.65e-08,11;CL:0000988,2.06e-07,32;CL:0002032,2.06e-07,32;CL:0000037,2.06e-07,32;CL:0000837,2.06e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.50e-10!41;UBERON:0002370!1.52e-10!23;UBERON:0000974!1.52e-10!23;UBERON:0004807!1.52e-10!23;UBERON:0005058!1.52e-10!23;UBERON:0003351!1.52e-10!23;UBERON:0009113!1.52e-10!23;UBERON:0003295!1.52e-10!23;UBERON:0009722!1.52e-10!23;UBERON:0005562!1.52e-10!23;UBERON:0007690!1.52e-10!23;UBERON:0006562!2.30e-10!24;UBERON:0001557!2.30e-10!24;UBERON:0001042!2.30e-10!24;UBERON:0008814!2.30e-10!24;UBERON:0009145!2.30e-10!24;UBERON:0001004!3.38e-10!42;UBERON:0002390!4.53e-10!45;UBERON:0003061!4.53e-10!45;UBERON:0003408!5.51e-10!24;UBERON:0002193!7.83e-10!48;UBERON:0004177!9.50e-10!29;UBERON:0000072!2.78e-09!27;UBERON:0003081!7.43e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.87e-11,120;UBERON:0004120,1.87e-11,120;UBERON:0006603,1.87e-11,120;UBERON:0000065,1.50e-10,41;UBERON:0002370,1.52e-10,23;UBERON:0000974,1.52e-10,23;UBERON:0004807,1.52e-10,23;UBERON:0005058,1.52e-10,23;UBERON:0003351,1.52e-10,23;UBERON:0009113,1.52e-10,23;UBERON:0003295,1.52e-10,23;UBERON:0009722,1.52e-10,23;UBERON:0005562,1.52e-10,23;UBERON:0007690,1.52e-10,23;UBERON:0006562,2.29e-10,24;UBERON:0001557,2.29e-10,24;UBERON:0001042,2.29e-10,24;UBERON:0008814,2.29e-10,24;UBERON:0009145,2.29e-10,24;UBERON:0001004,3.38e-10,42;UBERON:0002390,4.53e-10,45;UBERON:0003061,4.53e-10,45;UBERON:0003408,5.51e-10,24;UBERON:0002193,7.82e-10,48;UBERON:0002405,7.82e-10,48;UBERON:0004177,9.50e-10,29;UBERON:0005057,9.50e-10,29;UBERON:0000153,1.29e-09,43;UBERON:0000072,2.78e-09,27;UBERON:0003081,1.69e-08,87;UBERON:0000077,8.57e-08,35;UBERON:0007811,1.11e-07,36|phase1_expression=13.6126520039075,5.23463111459042,2.27499619694768,4.23449895829562,3.00537437967808,10.9121526742728,7.94282978024787,17.5607719880544,30.6919414290633,32.5349691587571,23.2856436786687,20.4216727028061,20.0304854019511,16.9595580692855,4.66353666541928,6.07425802169478,4.89693314689703,19.874116417569,19.4702495720149,16.5511964201232,4.33720779770456,21.2482635569895,25.0751797573378,7.1996590257033,4.81759490241057,7.46501553349526,7.32295393470427,6.03319451520489,3.04037471130198,5.79669298447841,4.8780712344167,3.17515336729816,6.76571266343027,0,10.6875099307972,7.97926297720763,9.59595974433135,25.1118978442145,30.4720784364282,29.3173296625327,24.7057224973026,23.2235464885872,24.2755176515577,4.40638862914521,4.35920804243913,5.13930906052708,3.9119567217402,5.45062890951116,2.85592037554813,5.05517737593137,5.73944328663986,4.31257693094915,25.6707387268337,34.8173828165445,28.231879127967,9.00408026125814,7.16333599846892,5.15672092277442,3.64169629547276,4.23192783417626,2.53532561402472,3.72728985276045,2.66788438833342,10.3488467487361,4.94433181283487,14.209602298922,6.5912024314049,5.76327457982332,7.77672092313582,4.99521971827255,5.67877395648731,3.42781181284564,3.09215957332259,3.1847607795888,3.64212789869298,5.51531271966013,2.20231761998777,1.78762273319263,1.53606533256243,1.97829431595291,2.47016637726506,4.16730696445408,3.90856198601933,1.68828783009504,1.83357897332172,4.71405736757868,4.6982654663704,4.47358669980721,17.265572079966,23.5027551932103,9.56552812715537,6.88339101585109,3.39985666853875,4.31762553310254,2.59910566979068,3.58421509677868,5.05599912474307,8.52151612890289,6.23486411046885,9.18682893726885,9.57735254481427,10.2661181931454,5.09610479413291,21.3320010945999,6.71122227134764,7.09407623330276,7.07734223020697,5.82337786567206,16.572024553419,14.1020032111584,10.0621489524359,8.22056791442781,9.68585088475446,9.04335843315735,6.70255630673517,8.92232798440696,10.3821886448437,3.90418263683761,22.9998743506967,11.9707468961083,11.9254419968613,9.69750506270444,5.59175283654366,1.46390398505774,1.46612694769419,4.85368404896324,31.7510079940689,28.1954283566902,31.0051354058278,1.64769703345305,1.83000241127451,2.63874139437015,1.73824320192276,1.53429274398198,3.32460871295296,1.46017136760982,8.7581852911272,8.08645308965605,4.0435641349388,6.94458124425364,8.32770834961304,9.19608417733892,7.92273371143537,5.87748789559289,5.8511389270142,6.91814089538189,5.71580519814346,4.13925393182425,15.30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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12400 | |||
|HGNC= | |||
|MCL_coexpression_id=806 | |||
|TSSclassifier=NA | |||
|UniProt=Q08024 | |||
|association_with_transcript=54bp_to_ENSMUST00000052209,ENSMUST00000109392,ENSMUST00000109394,ENSMUST00000109395,NM_001161456,NM_001161457,NM_001161458,NM_022309,uc009nbp.2,uc009nbq.2,uc009nbr.2,uc012gjd.1_5end | |||
|cluster_id=chr8:107694628..107694659,+ | |||
|description=CAGE_peak_1_at_Cbfb_5end | |||
|id=chr8:107694628..107694659,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.83e-08!12;CL:0000542!1.92e-08!13;CL:0000051!1.92e-08!13;CL:0000084!7.65e-08!11;CL:0000827!7.65e-08!11;CL:0000988!2.08e-07!32;CL:0002032!2.08e-07!32;CL:0000037!2.08e-07!32;CL:0000566!2.08e-07!32;CL:0000837!2.08e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.83e-08,12;CL:0000542,1.92e-08,13;CL:0000051,1.92e-08,13;CL:0000084,7.65e-08,11;CL:0000827,7.65e-08,11;CL:0000988,2.06e-07,32;CL:0002032,2.06e-07,32;CL:0000037,2.06e-07,32;CL:0000837,2.06e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.50e-10!41;UBERON:0002370!1.52e-10!23;UBERON:0000974!1.52e-10!23;UBERON:0004807!1.52e-10!23;UBERON:0005058!1.52e-10!23;UBERON:0003351!1.52e-10!23;UBERON:0009113!1.52e-10!23;UBERON:0003295!1.52e-10!23;UBERON:0009722!1.52e-10!23;UBERON:0005562!1.52e-10!23;UBERON:0007690!1.52e-10!23;UBERON:0006562!2.30e-10!24;UBERON:0001557!2.30e-10!24;UBERON:0001042!2.30e-10!24;UBERON:0008814!2.30e-10!24;UBERON:0009145!2.30e-10!24;UBERON:0001004!3.38e-10!42;UBERON:0002390!4.53e-10!45;UBERON:0003061!4.53e-10!45;UBERON:0003408!5.51e-10!24;UBERON:0002193!7.83e-10!48;UBERON:0004177!9.50e-10!29;UBERON:0000072!2.78e-09!27;UBERON:0003081!7.43e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.87e-11,120;UBERON:0004120,1.87e-11,120;UBERON:0006603,1.87e-11,120;UBERON:0000065,1.50e-10,41;UBERON:0002370,1.52e-10,23;UBERON:0000974,1.52e-10,23;UBERON:0004807,1.52e-10,23;UBERON:0005058,1.52e-10,23;UBERON:0003351,1.52e-10,23;UBERON:0009113,1.52e-10,23;UBERON:0003295,1.52e-10,23;UBERON:0009722,1.52e-10,23;UBERON:0005562,1.52e-10,23;UBERON:0007690,1.52e-10,23;UBERON:0006562,2.29e-10,24;UBERON:0001557,2.29e-10,24;UBERON:0001042,2.29e-10,24;UBERON:0008814,2.29e-10,24;UBERON:0009145,2.29e-10,24;UBERON:0001004,3.38e-10,42;UBERON:0002390,4.53e-10,45;UBERON:0003061,4.53e-10,45;UBERON:0003408,5.51e-10,24;UBERON:0002193,7.82e-10,48;UBERON:0002405,7.82e-10,48;UBERON:0004177,9.50e-10,29;UBERON:0005057,9.50e-10,29;UBERON:0000153,1.29e-09,43;UBERON:0000072,2.78e-09,27;UBERON:0003081,1.69e-08,87;UBERON:0000077,8.57e-08,35;UBERON:0007811,1.11e-07,36 | |||
|phase1_expression=13.6126520039075,5.23463111459042,2.27499619694768,4.23449895829562,3.00537437967808,10.9121526742728,7.94282978024787,17.5607719880544,30.6919414290633,32.5349691587571,23.2856436786687,20.4216727028061,20.0304854019511,16.9595580692855,4.66353666541928,6.07425802169478,4.89693314689703,19.874116417569,19.4702495720149,16.5511964201232,4.33720779770456,21.2482635569895,25.0751797573378,7.1996590257033,4.81759490241057,7.46501553349526,7.32295393470427,6.03319451520489,3.04037471130198,5.79669298447841,4.8780712344167,3.17515336729816,6.76571266343027,0,10.6875099307972,7.97926297720763,9.59595974433135,25.1118978442145,30.4720784364282,29.3173296625327,24.7057224973026,23.2235464885872,24.2755176515577,4.40638862914521,4.35920804243913,5.13930906052708,3.9119567217402,5.45062890951116,2.85592037554813,5.05517737593137,5.73944328663986,4.31257693094915,25.6707387268337,34.8173828165445,28.231879127967,9.00408026125814,7.16333599846892,5.15672092277442,3.64169629547276,4.23192783417626,2.53532561402472,3.72728985276045,2.66788438833342,10.3488467487361,4.94433181283487,14.209602298922,6.5912024314049,5.76327457982332,7.77672092313582,4.99521971827255,5.67877395648731,3.42781181284564,3.09215957332259,3.1847607795888,3.64212789869298,5.51531271966013,2.20231761998777,1.78762273319263,1.53606533256243,1.97829431595291,2.47016637726506,4.16730696445408,3.90856198601933,1.68828783009504,1.83357897332172,4.71405736757868,4.6982654663704,4.47358669980721,17.265572079966,23.5027551932103,9.56552812715537,6.88339101585109,3.39985666853875,4.31762553310254,2.59910566979068,3.58421509677868,5.05599912474307,8.52151612890289,6.23486411046885,9.18682893726885,9.57735254481427,10.2661181931454,5.09610479413291,21.3320010945999,6.71122227134764,7.09407623330276,7.07734223020697,5.82337786567206,16.572024553419,14.1020032111584,10.0621489524359,8.22056791442781,9.68585088475446,9.04335843315735,6.70255630673517,8.92232798440696,10.3821886448437,3.90418263683761,22.9998743506967,11.9707468961083,11.9254419968613,9.69750506270444,5.59175283654366,1.46390398505774,1.46612694769419,4.85368404896324,31.7510079940689,28.1954283566902,31.0051354058278,1.64769703345305,1.83000241127451,2.63874139437015,1.73824320192276,1.53429274398198,3.32460871295296,1.46017136760982,8.7581852911272,8.08645308965605,4.0435641349388,6.94458124425364,8.32770834961304,9.19608417733892,7.92273371143537,5.87748789559289,5.8511389270142,6.91814089538189,5.71580519814346,4.13925393182425,15.3053274982318,16.2631228944325,14.0760899331159,15.7820927347854,10.5657954705727,9.05455632957633,8.84863186554157,11.5439874754726,24.5774615559632,22.3892679189802,25.5747149456033,12.6346721246656,9.85009451920604,9.36322719597277,8.04932100989715,8.46086196513836,7.25055430570678,6.0458825635106,6.17028823219124,6.30532848782715,8.55711219550098,7.05920095540109,5.59374785866405,4.67839959761063,6.14740322814942,4.42881181909227,1.89260953707715,5.14523061896422,5.61711931072457,3.70230793328962,9.38468302355029,9.0572302025571,8.11865006329188,7.26060688644033,5.11469500843202,4.37518940058886,5.69434873853414,3.62337700392824,4.27269854960458,5.57078121715222,4.28920991662064,5.39291645192533,3.24207074812041,3.98282546508734,14.9837641752935,9.82537208443668,9.01661885384643,8.34970444165788,6.98228953803453,8.20589092716727,6.13394410105296,2.21415221969403,3.1399745568275,1.97435462274881,3.85388415213294,5.5058884886311,6.2898878436225,3.59779379815766,3.24576194221605,3.61765739628625,4.58326533206556,5.4662266115654,5.5125977103512,4.3929826110093,14.3768206527355,6.69853705803306,3.43241440426017,5.55673531483646,3.40855085691633,1.4473305640901,9.42241269849684,12.885416000393,13.6890580211302,11.8821560042632,10.0916806764056,8.04030035720716,7.61739650835244,8.78101415360095,11.5073655197519,9.30151696524855,11.0023790373666,7.20998584749247,8.28887912956299,7.5217510462386,9.04747703635634,5.4390568381871,7.37646409528554,5.79467167239938,3.21101179975584,1.75817529888305,12.622990794004,4.79694761688309,12.6203287766503,8.98009111882268,10.7711698866399,12.4263774935327,16.0415045339324,14.7199796010193,10.1202675418724,9.05993159525067,8.30104333687699,2.57057053137446,10.5035663054119,8.72521457969551,8.79589580509311,5.44401405809367,7.96470830039777,9.46844481004428,6.65111825322452,4.90373207365335,4.13422650033082,3.68922177532713,6.71913562237375,7.27067458955011,8.55593708123331,6.95280867458795,3.16255825724996,2.06271086496374,2.04263763452273,7.38250485528372,6.72665155670323,8.57348140126369,7.09360934569094,8.56170324489939,6.91105886528908,2.74018454203139,7.27482294997502,3.60114520468494,7.05690873775878,8.57408515295696,8.88054346827481,11.2785169615651,9.19167048824151,9.02774948597837,4.08073171281791,4.45020724825223,8.88528580148834,11.3512777379772,11.1116716421827,4.70921142511728,6.97140561377228,8.00723606222829,27.7064840889984,33.0285427483833,31.2331940797998,6.68269432610579,13.2861117304077,10.57261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| |||
|short_description=p1@Cbfb | |||
}} |
Latest revision as of 07:00, 27 September 2015
Short description: | p1@Cbfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cbfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:806 |
Association with transcript: | 54bp_to_ENSMUST00000052209, ENSMUST00000109392, ENSMUST00000109394, ENSMUST00000109395, NM_001161456, NM_001161457, NM_001161458, NM_022309, uc009nbp.2, uc009nbq.2, uc009nbr.2, uc012gjd.1_5end |
EntrezGene: | Cbfb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.83e-08 | 12 |
lymphocyte | 1.92e-08 | 13 |
common lymphoid progenitor | 1.92e-08 | 13 |
T cell | 7.65e-08 | 11 |
pro-T cell | 7.65e-08 | 11 |
hematopoietic cell | 2.06e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.06e-07 | 32 |
hematopoietic stem cell | 2.06e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.06e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.87e-11 | 120 |
mesoderm-derived structure | 1.87e-11 | 120 |
presumptive mesoderm | 1.87e-11 | 120 |
respiratory tract | 1.50e-10 | 41 |
thymus | 1.52e-10 | 23 |
neck | 1.52e-10 | 23 |
respiratory system epithelium | 1.52e-10 | 23 |
hemolymphoid system gland | 1.52e-10 | 23 |
pharyngeal epithelium | 1.52e-10 | 23 |
thymic region | 1.52e-10 | 23 |
pharyngeal gland | 1.52e-10 | 23 |
entire pharyngeal arch endoderm | 1.52e-10 | 23 |
thymus primordium | 1.52e-10 | 23 |
early pharyngeal endoderm | 1.52e-10 | 23 |
pharynx | 2.29e-10 | 24 |
upper respiratory tract | 2.29e-10 | 24 |
chordate pharynx | 2.29e-10 | 24 |
pharyngeal arch system | 2.29e-10 | 24 |
pharyngeal region of foregut | 2.29e-10 | 24 |
respiratory system | 3.38e-10 | 42 |
hematopoietic system | 4.53e-10 | 45 |
blood island | 4.53e-10 | 45 |
gland of gut | 5.51e-10 | 24 |
hemolymphoid system | 7.82e-10 | 48 |
immune system | 7.82e-10 | 48 |
hemopoietic organ | 9.50e-10 | 29 |
immune organ | 9.50e-10 | 29 |
anterior region of body | 1.29e-09 | 43 |
segment of respiratory tract | 2.78e-09 | 27 |
lateral plate mesoderm | 1.69e-08 | 87 |
mixed endoderm/mesoderm-derived structure | 8.57e-08 | 35 |
craniocervical region | 1.11e-07 | 36 |