FFCP PHASE1:Mm9::chr13:21826924..21826939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | |EntrezGene=100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=649 | |||
|TSSclassifier=NA | |||
|UniProt=P62806 | |UniProt=P62806 | ||
|association_with_transcript=21bp_to_ENSMUST00000087714_5end | |association_with_transcript=21bp_to_ENSMUST00000087714_5end | ||
|cluster_id=chr13:21826924..21826939,+ | |||
|description=CAGE_peak_8_at_Hist1h4c_5end,CAGE_peak_8_at_Hist1h4d_5end,CAGE_peak_8_at_Hist1h4f_5end,CAGE_peak_8_at_Hist1h4h_5end,CAGE_peak_8_at_Hist1h4i_5end,CAGE_peak_8_at_Hist1h4j_5end,CAGE_peak_8_at_Hist1h4k_5end,CAGE_peak_8_at_Hist1h4m_5end,CAGE_peak_8_at_Hist1h4n_5end,CAGE_peak_9_at_Hist1h4a_5end,CAGE_peak_9_at_Hist1h4b_5end,CAGE_peak_9_at_Hist2h4_5end,CAGE_peak_9_at_Hist4h4_5end | |description=CAGE_peak_8_at_Hist1h4c_5end,CAGE_peak_8_at_Hist1h4d_5end,CAGE_peak_8_at_Hist1h4f_5end,CAGE_peak_8_at_Hist1h4h_5end,CAGE_peak_8_at_Hist1h4i_5end,CAGE_peak_8_at_Hist1h4j_5end,CAGE_peak_8_at_Hist1h4k_5end,CAGE_peak_8_at_Hist1h4m_5end,CAGE_peak_8_at_Hist1h4n_5end,CAGE_peak_9_at_Hist1h4a_5end,CAGE_peak_9_at_Hist1h4b_5end,CAGE_peak_9_at_Hist2h4_5end,CAGE_peak_9_at_Hist4h4_5end | ||
|id=chr13:21826924..21826939,+ | |id=chr13:21826924..21826939,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.79e-16!66;CL:0000144!1.54e-12!121;CL:0000012!1.54e-12!121;CL:0000988!1.55e-11!32;CL:0002032!1.55e-11!32;CL:0000037!1.55e-11!32;CL:0000566!1.55e-11!32;CL:0000837!1.55e-11!32;CL:0002371!3.67e-11!118;CL:0002031!3.25e-10!25;CL:0000548!1.01e-09!115;CL:0000004!1.01e-09!115;CL:0000255!1.01e-09!115;CL:0000049!2.87e-08!19;CL:0002320!5.39e-08!46;CL:0000134!5.39e-08!46;CL:0000034!8.65e-08!97;CL:0002076!2.20e-07!15;CL:0000219!6.86e-07!54;CL:0000066!9.62e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.54e-19,32;CL:0002032,1.54e-19,32;CL:0000037,1.54e-19,32;CL:0000837,1.54e-19,32;CL:0002320,8.24e-17,46;CL:0000134,8.24e-17,46;CL:0002031,5.06e-16,25;CL:0000219,5.24e-16,54;CL:0000034,1.92e-13,97;CL:0000049,1.96e-13,19;CL:0000066,4.40e-13,25;CL:0002076,3.86e-12,15;CL:0000763,2.65e-10,16;CL:0000050,2.98e-10,9;CL:0000723,7.33e-10,91;CL:0000048,7.33e-10,91;CL:0000223,2.36e-09,20;CL:0000839,3.42e-09,13;CL:0002563,9.24e-09,9;CL:0002251,9.24e-09,9;CL:0000838,4.23e-08,12;CL:0000084,2.54e-07,11;CL:0000827,2.54e-07,11;CL:0000542,2.87e-07,13;CL:0000051,2.87e-07,13;CL:0000553,2.96e-07,6;CL:0000556,2.96e-07,6;CL:0000791,3.48e-07,9;CL:0000789,3.48e-07,9;CL:0002420,3.48e-07,9;CL:0002419,3.48e-07,9;CL:0000790,3.48e-07,9;CL:0000738,3.97e-07,17;CL:0002087,3.97e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.96e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.92e-09!48;UBERON:0002390!2.20e-08!45;UBERON:0003061!2.20e-08!45;UBERON:0002384!5.39e-08!46;UBERON:0000344!2.25e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.24e-17,46;UBERON:0000344,4.04e-12,15;UBERON:0000485,2.85e-10,11;UBERON:0001242,3.17e-10,13;UBERON:0001262,3.17e-10,13;UBERON:0004786,3.17e-10,13;UBERON:0004923,7.30e-09,24;UBERON:0002193,7.50e-09,48;UBERON:0002405,7.50e-09,48;UBERON:0003350,9.24e-09,9;UBERON:0004808,9.24e-09,9;UBERON:0001277,9.24e-09,9;UBERON:0002390,6.98e-08,45;UBERON:0003061,6.98e-08,45;UBERON:0000490,2.42e-07,66 | |||
|phase1_expression=23.5418805244047,10.8182376368202,3.18499467572675,14.5182821427278,21.0376206577466,45.1595241442984,135.495331545405,13.8161956082487,4.646027831005,8.42632294759177,9.58820622062828,3.90883579077148,24.1393029203,12.6759583507546,1.99865857089398,1307.99022733828,2380.60907127008,75.710919685977,56.7653755127759,290.706911481651,0.0850432901510698,0.0992909512008853,381.612891931985,87.6758476907869,108.969408506906,30.4342940980961,37.9070556619986,28.0112602491656,79.809836171677,50.1539958222262,58.5368548130004,1096.06294239132,11.0711661765223,776.56023697565,91.8548150809053,206.795898825964,105.555557187645,189.594828723819,396.918355018091,314.114246384279,156.46957581625,243.164192645207,237.900072985265,0,0,0,0,0,0,0,0.139986421625363,5.75010257459886,34.0598690297205,23.211588544363,15.1242209614109,0,0,0,0.809265843438391,0,2.53532561402472,0,2.66788438833342,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.841299845405528,0,0.662605622854841,0.857435594504678,0.479227355091182,3.67687514644008,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0,0,0,0,0.294628585473668,0.142371680799103,0,7.04253597998612,32.7980570863449,20.5803786978191,22.371020801516,0,0,0,0,0,0.170430322578058,61.5692830908799,87.9815540530747,28.3095273751128,42.3477375467249,7.64415719119937,0,188.99667880279,167.47087107904,195.637960220721,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0.376999773989026,0,0,0,0.485300549842228,0.441683036920787,2.90925151881133,0,0,0,0.510914110417183,182.118989248999,443.328118204128,174.213281317172,0,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0.497627882440372,0,0,0.260240885925407,1.83921683546778,1.44049703844279,0,0.476255494059295,0.2562274405697,0.655912071918102,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,136.931571526081,351.537241118701,0,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0.464473343720877,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.42002084971952,0.482354319504834,0.763877555344259,1.15078454980324,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0,1.51593129416388,0.325929952884052,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,9.04747703635634,16.3171705145613,0,0,0,0,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0,0,0,0,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.388076051348264,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.596861720015682,0,0,0,2.05045056957423,0.206386867963223,0.740778109478847,1.50694765603753,0.956859594047176,1.83022538565218,92.4682659166573,83.2711141325765,94.1141821608126,0,0.790839983952838,0.609958401380546,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.352071715937262,0.651021924219751,0.629156066554265,0,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.895133478337407,1.58945083825012,1.44234539423963,0.590758108698309,1.21159739937777,0.914481679859998,1.41156659191577,0.682205165178267,1.15454209968395,0.818138315270983,0,62.3780528981122,21.8901810127121,22.8323078255147,0,0,0,0.428736758158132,0.501572104035363,0,0,0,9.6237782112465,0,0,0,0,0,0,1.03787347584177,0,0.853668028770671,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0,0.655490552289177,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0,0,0,0,0.355905054372522,0.788035859004508,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=23.5418805244047,10.8182376368202,3.18499467572675,14.5182821427278,21.0376206577466,45.1595241442984,135.495331545405,13.8161956082487,4.646027831005,8.42632294759177,9.58820622062828,3.90883579077148,24.1393029203,12.6759583507546,1.99865857089398,1307.99022733828,2380.60907127008,75.710919685977,56.7653755127759,290.706911481651,0.0850432901510698,0.0992909512008853,381.612891931985,87.6758476907869,108.969408506906,30.4342940980961,37.9070556619986,28.0112602491656,79.809836171677,50.1539958222262,58.5368548130004,1096.06294239132,11.0711661765223,776.56023697565,91.8548150809053,206.795898825964,105.555557187645,189.594828723819,396.918355018091,314.114246384279,156.46957581625,243.164192645207,237.900072985265,0,0,0,0,0,0,0,0.139986421625363,5.75010257459886,34.0598690297205,23.211588544363,15.1242209614109,0,0,0,0.809265843438391,0,2.53532561402472,0,2.66788438833342,0,0,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.841299845405528,0,0.662605622854841,0.857435594504678,0.479227355091182,3.67687514644008,0,0.127687338085188,0.153606533256243,0.263772575460388,0,0,0,0,0,0.294628585473668,0.142371680799103,0,7.04253597998612,32.7980570863449,20.5803786978191,22.371020801516,0,0,0,0,0,0.170430322578058,61.5692830908799,87.9815540530747,28.3095273751128,42.3477375467249,7.64415719119937,0,188.99667880279,167.47087107904,195.637960220721,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0,0.376999773989026,0,0,0,0.485300549842228,0.441683036920787,2.90925151881133,0,0,0,0.510914110417183,182.118989248999,443.328118204128,174.213281317172,0,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0.497627882440372,0,0,0.260240885925407,1.83921683546778,1.44049703844279,0,0.476255494059295,0.2562274405697,0.655912071918102,0.258703370739016,0.215567992932842,0.567318240503458,0.351902248327898,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,136.931571526081,351.537241118701,0,0.207125772535502,0.234526059981096,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0,0,0,0.264450566663544,0,0.464473343720877,0,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0,0.758671603812327,0.342745537829186,0,0.407302655690628,0,0.0701358198903186,0.126473074248515,0,0,0,0.296452627087149,0.500535317148282,1.57247196090562,1.34917267430912,1.42002084971952,0.482354319504834,0.763877555344259,1.15078454980324,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0,1.51593129416388,0.325929952884052,0.678980343100753,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0,0,0,9.04747703635634,16.3171705145613,0,0,0,0,0.163934945376675,0,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0,0,0,0,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.388076051348264,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.16488625294148,0,0.120625849856312,0.596861720015682,0,0,0,2.05045056957423,0.206386867963223,0.740778109478847,1.50694765603753,0.956859594047176,1.83022538565218,92.4682659166573,83.2711141325765,94.1141821608126,0,0.790839983952838,0.609958401380546,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.168956125490778,0.352071715937262,0.651021924219751,0.629156066554265,0,0.288030006257865,0.316011120628178,0.405450430580328,0.410843828659309,0.25984164595559,0.895133478337407,1.58945083825012,1.44234539423963,0.590758108698309,1.21159739937777,0.914481679859998,1.41156659191577,0.682205165178267,1.15454209968395,0.818138315270983,0,62.3780528981122,21.8901810127121,22.8323078255147,0,0,0,0.428736758158132,0.501572104035363,0,0,0,9.6237782112465,0,0,0,0,0,0,1.03787347584177,0,0.853668028770671,0.729320151204882,0.209613162627982,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0,0,0.655490552289177,0.0640251524048693,0.287177344778066,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0,0,0,0,0.355905054372522,0.788035859004508,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p8@Hist1h4c,p8@Hist1h4d,p8@Hist1h4f,p8@Hist1h4h,p8@Hist1h4i,p8@Hist1h4j,p8@Hist1h4k,p8@Hist1h4m,p8@Hist1h4n,p9@Hist1h4a,p9@Hist1h4b,p9@Hist2h4,p9@Hist4h4 | |short_description=p8@Hist1h4c,p8@Hist1h4d,p8@Hist1h4f,p8@Hist1h4h,p8@Hist1h4i,p8@Hist1h4j,p8@Hist1h4k,p8@Hist1h4m,p8@Hist1h4n,p9@Hist1h4a,p9@Hist1h4b,p9@Hist2h4,p9@Hist4h4 | ||
}} | }} |
Latest revision as of 06:41, 27 September 2015
Short description: | p8@Hist1h4c, p8@Hist1h4d, p8@Hist1h4f, p8@Hist1h4h, p8@Hist1h4i, p8@Hist1h4j, p8@Hist1h4k, p8@Hist1h4m, p8@Hist1h4n, p9@Hist1h4a, p9@Hist1h4b, p9@Hist2h4, p9@Hist4h4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Hist1h4c_5end, CAGE_peak_8_at_Hist1h4d_5end, CAGE_peak_8_at_Hist1h4f_5end, CAGE_peak_8_at_Hist1h4h_5end, CAGE_peak_8_at_Hist1h4i_5end, CAGE_peak_8_at_Hist1h4j_5end, CAGE_peak_8_at_Hist1h4k_5end, CAGE_peak_8_at_Hist1h4m_5end, CAGE_peak_8_at_Hist1h4n_5end, CAGE_peak_9_at_Hist1h4a_5end, CAGE_peak_9_at_Hist1h4b_5end, CAGE_peak_9_at_Hist2h4_5end, CAGE_peak_9_at_Hist4h4_5end |
Coexpression cluster: | MCL_coexpression_mm9:649 |
Association with transcript: | 21bp_to_ENSMUST00000087714_5end |
EntrezGene: | 100041230,319155,319156,319157,319158,319159,319160,319161,320332,326619,326620,69386,97122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.24e-17 | 46 |
mucosa | 4.04e-12 | 15 |
simple columnar epithelium | 2.85e-10 | 11 |
intestinal mucosa | 3.17e-10 | 13 |
wall of intestine | 3.17e-10 | 13 |
gastrointestinal system mucosa | 3.17e-10 | 13 |
organ component layer | 7.30e-09 | 24 |
hemolymphoid system | 7.50e-09 | 48 |
immune system | 7.50e-09 | 48 |
epithelium of mucosa | 9.24e-09 | 9 |
gastrointestinal system epithelium | 9.24e-09 | 9 |
intestinal epithelium | 9.24e-09 | 9 |
hematopoietic system | 6.98e-08 | 45 |
blood island | 6.98e-08 | 45 |
unilaminar epithelium | 2.42e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.96e-08 | 6 |