FFCP PHASE1:Mm9::chr13:21272048..21272114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19720 | |EntrezGene=19720 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q62158 | |UniProt=Q62158 | ||
|association_with_transcript=0bp_to_ENSMUST00000021761_5end | |association_with_transcript=0bp_to_ENSMUST00000021761_5end | ||
|cluster_id=chr13:21272048..21272114,+ | |||
|description=CAGE_peak_1_at_Trim27_5end | |description=CAGE_peak_1_at_Trim27_5end | ||
|id=chr13:21272048..21272114,+ | |id=chr13:21272048..21272114,+ | ||
|ontology_enrichment_celltype=CL:0000988!6.92e-11!32;CL:0002032!6.92e-11!32;CL:0000037!6.92e-11!32;CL:0000566!6.92e-11!32;CL:0000837!6.92e-11!32;CL:0000034!1.71e-10!97;CL:0002320!1.53e-08!46;CL:0000134!1.53e-08!46;CL:0002031!2.89e-08!25;CL:0000723!6.59e-08!91;CL:0000048!6.59e-08!91;CL:0000738!1.47e-07!17;CL:0002087!1.47e-07!17;CL:0000542!5.41e-07!13;CL:0000051!5.41e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.92e-11,32;CL:0002032,6.92e-11,32;CL:0000037,6.92e-11,32;CL:0000837,6.92e-11,32;CL:0000034,1.71e-10,97;CL:0002320,1.53e-08,46;CL:0000134,1.53e-08,46;CL:0002031,2.89e-08,25;CL:0000723,6.59e-08,91;CL:0000048,6.59e-08,91;CL:0000738,1.47e-07,17;CL:0002087,1.47e-07,17;CL:0000542,5.41e-07,13;CL:0000051,5.41e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.19e-10!45;UBERON:0003061!1.19e-10!45;UBERON:0002193!2.67e-09!48;UBERON:0002384!1.53e-08!46;UBERON:0002370!3.22e-07!23;UBERON:0000974!3.22e-07!23;UBERON:0004807!3.22e-07!23;UBERON:0005058!3.22e-07!23;UBERON:0003351!3.22e-07!23;UBERON:0009113!3.22e-07!23;UBERON:0003295!3.22e-07!23;UBERON:0009722!3.22e-07!23;UBERON:0005562!3.22e-07!23;UBERON:0007690!3.22e-07!23;UBERON:0004177!3.42e-07!29;UBERON:0002323!4.88e-07!37;UBERON:0004458!4.88e-07!37;UBERON:0003886!5.62e-07!38 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.19e-10,45;UBERON:0003061,1.19e-10,45;UBERON:0002193,2.67e-09,48;UBERON:0002405,2.67e-09,48;UBERON:0002384,1.53e-08,46;UBERON:0002370,3.22e-07,23;UBERON:0000974,3.22e-07,23;UBERON:0004807,3.22e-07,23;UBERON:0005058,3.22e-07,23;UBERON:0003351,3.22e-07,23;UBERON:0009113,3.22e-07,23;UBERON:0003295,3.22e-07,23;UBERON:0009722,3.22e-07,23;UBERON:0005562,3.22e-07,23;UBERON:0007690,3.22e-07,23;UBERON:0004177,3.42e-07,29;UBERON:0005057,3.42e-07,29;UBERON:0002323,4.88e-07,37;UBERON:0004458,4.88e-07,37;UBERON:0003886,5.62e-07,38;UBERON:0000926,8.70e-07,120;UBERON:0004120,8.70e-07,120;UBERON:0006603,8.70e-07,120 | |||
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| ||
|short_description=p1@Trim27 | |short_description=p1@Trim27 | ||
}} | }} |
Latest revision as of 06:24, 27 September 2015
Short description: | p1@Trim27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim27_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000021761_5end |
EntrezGene: | Trim27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.92e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.92e-11 | 32 |
hematopoietic stem cell | 6.92e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.92e-11 | 32 |
stem cell | 1.71e-10 | 97 |
connective tissue cell | 1.53e-08 | 46 |
mesenchymal cell | 1.53e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 2.89e-08 | 25 |
somatic stem cell | 6.59e-08 | 91 |
multi fate stem cell | 6.59e-08 | 91 |
leukocyte | 1.47e-07 | 17 |
nongranular leukocyte | 1.47e-07 | 17 |
lymphocyte | 5.41e-07 | 13 |
common lymphoid progenitor | 5.41e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.19e-10 | 45 |
blood island | 1.19e-10 | 45 |
hemolymphoid system | 2.67e-09 | 48 |
immune system | 2.67e-09 | 48 |
connective tissue | 1.53e-08 | 46 |
thymus | 3.22e-07 | 23 |
neck | 3.22e-07 | 23 |
respiratory system epithelium | 3.22e-07 | 23 |
hemolymphoid system gland | 3.22e-07 | 23 |
pharyngeal epithelium | 3.22e-07 | 23 |
thymic region | 3.22e-07 | 23 |
pharyngeal gland | 3.22e-07 | 23 |
entire pharyngeal arch endoderm | 3.22e-07 | 23 |
thymus primordium | 3.22e-07 | 23 |
early pharyngeal endoderm | 3.22e-07 | 23 |
hemopoietic organ | 3.42e-07 | 29 |
immune organ | 3.42e-07 | 29 |
body cavity | 4.88e-07 | 37 |
body cavity or lining | 4.88e-07 | 37 |
body cavity precursor | 5.62e-07 | 38 |
mesoderm | 8.70e-07 | 120 |
mesoderm-derived structure | 8.70e-07 | 120 |
presumptive mesoderm | 8.70e-07 | 120 |