FFCP PHASE1:Mm9::chr1:58852215..58852291,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:58852215..58852291,+ to FFCP PHASE1:Mm9::chr1:58852215..58852291,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12370 | |EntrezGene=12370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=165 | |||
|TSSclassifier=NA | |||
|UniProt=O89110,Q3U607 | |UniProt=O89110,Q3U607 | ||
|association_with_transcript=0bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end | |||
|cluster_id=chr1:58852215..58852291,+ | |||
|description=CAGE_peak_1_at_Casp8_5end | |||
|id=chr1:58852215..58852291,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.92e-07!32;CL:0002032!4.92e-07!32;CL:0000037!4.92e-07!32;CL:0000566!4.92e-07!32;CL:0000837!4.92e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.63e-07,32;CL:0002032,4.63e-07,32;CL:0000037,4.63e-07,32;CL:0000837,4.63e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.94e-20!193;UBERON:0004120!2.94e-20!193;UBERON:0006603!2.94e-20!193;UBERON:0003104!1.57e-14!131;UBERON:0009142!1.57e-14!131;UBERON:0001004!6.50e-13!42;UBERON:0000065!1.10e-12!41;UBERON:0003081!1.77e-12!88;UBERON:0000077!1.08e-10!97;UBERON:0001041!1.22e-10!92;UBERON:0002390!2.80e-10!45;UBERON:0003061!2.80e-10!45;UBERON:0002193!4.64e-10!48;UBERON:0001048!5.09e-09!147;UBERON:0004177!5.40e-09!29;UBERON:0002405!1.40e-08!70;UBERON:0000072!1.63e-07!27;UBERON:0005178!2.94e-07!17;UBERON:0005181!2.94e-07!17;UBERON:0002224!2.94e-07!17;UBERON:0000915!2.94e-07!17;UBERON:0008947!2.94e-07!17;UBERON:0003258!2.94e-07!17;UBERON:0005153!6.19e-07!17;UBERON:0005057!7.68e-07!51;UBERON:0003408!7.69e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.40e-14,120;UBERON:0004120,1.40e-14,120;UBERON:0006603,1.40e-14,120;UBERON:0001004,6.01e-13,42;UBERON:0001041,1.00e-12,80;UBERON:0000065,1.01e-12,41;UBERON:0003081,5.97e-12,87;UBERON:0002390,2.62e-10,45;UBERON:0003061,2.62e-10,45;UBERON:0002193,4.36e-10,48;UBERON:0002405,4.36e-10,48;UBERON:0001048,1.12e-09,134;UBERON:0000077,4.67e-09,35;UBERON:0004177,5.01e-09,29;UBERON:0005057,5.01e-09,29;UBERON:0000072,1.53e-07,27;UBERON:0005178,2.93e-07,17;UBERON:0005181,2.93e-07,17;UBERON:0002224,2.93e-07,17;UBERON:0000915,2.93e-07,17;UBERON:0008947,2.93e-07,17;UBERON:0003258,2.93e-07,17;UBERON:0002100,2.96e-07,90;UBERON:0005153,6.18e-07,17;UBERON:0003408,7.18e-07,24 | |||
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| ||
|short_description=p1@Casp8 | |||
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Latest revision as of 06:19, 27 September 2015
Short description: | p1@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Casp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:165 |
Association with transcript: | 0bp_to_ENSMUST00000027189, NM_009812, uc007bcs.1_5end |
EntrezGene: | Casp8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.63e-07 | 32 |
hematopoietic oligopotent progenitor cell | 4.63e-07 | 32 |
hematopoietic stem cell | 4.63e-07 | 32 |
hematopoietic multipotent progenitor cell | 4.63e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.40e-14 | 120 |
mesoderm-derived structure | 1.40e-14 | 120 |
presumptive mesoderm | 1.40e-14 | 120 |
respiratory system | 6.01e-13 | 42 |
foregut | 1.00e-12 | 80 |
respiratory tract | 1.01e-12 | 41 |
lateral plate mesoderm | 5.97e-12 | 87 |
hematopoietic system | 2.62e-10 | 45 |
blood island | 2.62e-10 | 45 |
hemolymphoid system | 4.36e-10 | 48 |
immune system | 4.36e-10 | 48 |
primordium | 1.12e-09 | 134 |
mixed endoderm/mesoderm-derived structure | 4.67e-09 | 35 |
hemopoietic organ | 5.01e-09 | 29 |
immune organ | 5.01e-09 | 29 |
segment of respiratory tract | 1.53e-07 | 27 |
thoracic cavity element | 2.93e-07 | 17 |
thoracic segment organ | 2.93e-07 | 17 |
thoracic cavity | 2.93e-07 | 17 |
thoracic segment of trunk | 2.93e-07 | 17 |
respiratory primordium | 2.93e-07 | 17 |
endoderm of foregut | 2.93e-07 | 17 |
trunk | 2.96e-07 | 90 |
epithelial bud | 6.18e-07 | 17 |
gland of gut | 7.18e-07 | 24 |