FFCP PHASE1:Mm9::chr18:38369330..38369382,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:38369330..38369382,- to FFCP PHASE1:Mm9::chr18:38369330..38369382,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75599 | |EntrezGene=75599 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFX3 | |UniProt=Q8CFX3 | ||
|association_with_transcript=33bp_to_ENSMUST00000057185,NM_029357,uc008eru.1_5end | |||
|cluster_id=chr18:38369330..38369382,- | |||
|description=CAGE_peak_2_at_Pcdh1_5end | |||
|id=chr18:38369330..38369382,- | |||
|ontology_enrichment_celltype=CL:0000066!9.68e-08!25;CL:0002563!4.47e-07!9;CL:0002251!4.47e-07!9;CL:0000223!6.73e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.14e-11,25;CL:0000223,3.50e-10,20;CL:0002563,6.53e-10,9;CL:0002251,6.53e-10,9;CL:0002076,1.35e-08,15;CL:0000239,1.39e-07,6;CL:0000677,1.39e-07,6;CL:0000584,1.39e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.84e-18!43;UBERON:0005409!1.27e-17!59;UBERON:0004119!1.09e-15!130;UBERON:0000925!1.09e-15!130;UBERON:0006595!1.09e-15!130;UBERON:0001007!6.14e-15!128;UBERON:0001555!6.14e-15!128;UBERON:0007026!6.14e-15!128;UBERON:0004921!6.71e-14!126;UBERON:0004185!6.71e-14!126;UBERON:0000344!4.25e-11!15;UBERON:0001242!6.69e-10!13;UBERON:0000060!6.69e-10!13;UBERON:0001262!6.69e-10!13;UBERON:0004786!6.69e-10!13;UBERON:0004923!2.71e-07!24;UBERON:0003350!4.47e-07!9;UBERON:0004808!4.47e-07!9;UBERON:0001277!4.47e-07!9;UBERON:0009854!6.84e-07!23;UBERON:0009856!6.84e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.50e-28,47;UBERON:0000160,5.97e-28,31;UBERON:0004119,2.39e-20,118;UBERON:0000925,2.39e-20,118;UBERON:0006595,2.39e-20,118;UBERON:0001007,2.84e-19,116;UBERON:0001555,2.84e-19,116;UBERON:0007026,2.84e-19,116;UBERON:0004921,8.82e-18,114;UBERON:0000344,5.53e-16,15;UBERON:0001242,3.57e-14,13;UBERON:0001262,3.57e-14,13;UBERON:0004786,3.57e-14,13;UBERON:0004923,1.12e-11,24;UBERON:0003350,6.53e-10,9;UBERON:0004808,6.53e-10,9;UBERON:0001277,6.53e-10,9;UBERON:0000485,1.32e-07,11 | |||
|phase1_expression=0,25.4752047576734,17.7449703361919,42.3449895829562,28.0501608769954,9.06548068324205,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,12.7993938234725,9.1763712426868,14.3557991028755,11.1998119001359,11.2045040996662,25.4631382071541,22.6827116783938,14.1907526819395,0,0,0,7.51014211353314,5.15327400611326,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0.791317726381163,0,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0.289864488701678,0,1.3599426674155,4.31762553310254,4.54843492213368,2.68816132258401,1.12355536105401,0,0,0,0.281686839553361,0,0,0,3.89683873820185,4.05375784760158,2.52762222507392,2.8545969929765,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,9.39340877390621,0,0,0,0,0,27.9587641827183,0,0,17.8819938646014,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,1.02286182932132,0.20778804455956,0.811206315338788,0,0.373220911830279,0,0.631325567659422,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,1.26173969138476,0,41.3023478729747,19.8337924997658,0.853153002140936,0.928946687441754,4.76809606891745,7.05892336181699,8.2279876222602,12.1744400712038,21.353807769503,22.7284557519135,22.1174983744237,26.8591237255554,21.6410136702223,16.178749355776,21.3976669375947,20.1132685986911,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0.889357881261447,0.333690211432188,0.196558995113203,0.449724224769707,1.21716072833102,1.20588579876208,0.763877555344259,1.43848068725405,2.43202840162553,2.19649130550465,5.75072826109418,2.97712758134803,1.24815069245824,7.32478746046624,4.12614051100398,5.30687873499704,0.184753190166605,0,0.162964976442026,0,0,0,0,0.390267295715598,0.472905432318573,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0.989820737835213,0,0.971122544619926,1.209294227859,0.377210159511796,0.885905678642318,0.307435147943927,4.39328098385976,1.09060118843252,1.78248689192361,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,1.87737366450968,1.48282449604674,0.220528398054962,2.80306630000516,3.55221738730992,1.86970067277283,2.74556391207214,2.46211349617592,27.6906794798358,0,0,0,0.185194527369712,0,0,0,0,0,0,13.3653886522116,0,1.21991680276109,4.10420295122845,3.55450103224597,6.33251434863915,7.01294601201068,7.10819719237889,8.11443420150492,19.9607058869361,3.10669656543463,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0,0,2.49403421976732,1.10992976687032,0.62799699626633,2.18250001273302,0.19318959403219,0.375364950902364,1.46521299413812,5.14484109789758,1.00314420807073,0,0,0,0,0,0,0,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,1.26358031702349,1.90517476513229,0.463537303779422,1.35036454324594,2.06042950401653,0.883193520806384,0.342869252385415,1.4198064492747,0.238436189947321,1.0174249164263,1.12931256498397,0.930760686808441,0.914639864363863,1.05227884575137,0.679020569229309,0,0.830445126869219,1.18205378850676,1.22769312950907,1.23949472948773,1.15743966588685,0.999242311751784,0.935726433781634,3.00819475667618,0.956441660344217,0.882365676478062,0.231867835620421 | |phase1_expression=0,25.4752047576734,17.7449703361919,42.3449895829562,28.0501608769954,9.06548068324205,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,12.7993938234725,9.1763712426868,14.3557991028755,11.1998119001359,11.2045040996662,25.4631382071541,22.6827116783938,14.1907526819395,0,0,0,7.51014211353314,5.15327400611326,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0.791317726381163,0,0.52091337055676,0,0,0,0.294628585473668,0.284743361598206,0.372798891650601,0.302904773332736,0.151143120213571,0.289864488701678,0,1.3599426674155,4.31762553310254,4.54843492213368,2.68816132258401,1.12355536105401,0,0,0,0.281686839553361,0,0,0,3.89683873820185,4.05375784760158,2.52762222507392,2.8545969929765,0,0,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,9.39340877390621,0,0,0,0,0,27.9587641827183,0,0,17.8819938646014,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.347648640384553,1.02286182932132,0.20778804455956,0.811206315338788,0,0.373220911830279,0,0.631325567659422,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0,0,1.26173969138476,0,41.3023478729747,19.8337924997658,0.853153002140936,0.928946687441754,4.76809606891745,7.05892336181699,8.2279876222602,12.1744400712038,21.353807769503,22.7284557519135,22.1174983744237,26.8591237255554,21.6410136702223,16.178749355776,21.3976669375947,20.1132685986911,0,0.228497025219458,0,0,0,0,0,0.147610147979602,0.156998727841375,0.370191491765402,0.889357881261447,0.333690211432188,0.196558995113203,0.449724224769707,1.21716072833102,1.20588579876208,0.763877555344259,1.43848068725405,2.43202840162553,2.19649130550465,5.75072826109418,2.97712758134803,1.24815069245824,7.32478746046624,4.12614051100398,5.30687873499704,0.184753190166605,0,0.162964976442026,0,0,0,0,0.390267295715598,0.472905432318573,0.8858587585951,0.159454768657487,0.655453258862952,0.518054945597687,0.578596234326046,0,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0.395287777946524,0.642642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0.989820737835213,0,0.971122544619926,1.209294227859,0.377210159511796,0.885905678642318,0.307435147943927,4.39328098385976,1.09060118843252,1.78248689192361,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,1.87737366450968,1.48282449604674,0.220528398054962,2.80306630000516,3.55221738730992,1.86970067277283,2.74556391207214,2.46211349617592,27.6906794798358,0,0,0,0.185194527369712,0,0,0,0,0,0,13.3653886522116,0,1.21991680276109,4.10420295122845,3.55450103224597,6.33251434863915,7.01294601201068,7.10819719237889,8.11443420150492,19.9607058869361,3.10669656543463,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.194915761479505,0,0,2.49403421976732,1.10992976687032,0.62799699626633,2.18250001273302,0.19318959403219,0.375364950902364,1.46521299413812,5.14484109789758,1.00314420807073,0,0,0,0,0,0,0,0.900642406448441,0.906284817968409,0,0,0,0,0,0,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,1.40462261204824,0.832326981263301,1.26358031702349,1.90517476513229,0.463537303779422,1.35036454324594,2.06042950401653,0.883193520806384,0.342869252385415,1.4198064492747,0.238436189947321,1.0174249164263,1.12931256498397,0.930760686808441,0.914639864363863,1.05227884575137,0.679020569229309,0,0.830445126869219,1.18205378850676,1.22769312950907,1.23949472948773,1.15743966588685,0.999242311751784,0.935726433781634,3.00819475667618,0.956441660344217,0.882365676478062,0.231867835620421 | ||
|short_description=p2@Pcdh1 | |||
}} | }} |
Latest revision as of 06:13, 27 September 2015
Short description: | p2@Pcdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 33bp_to_ENSMUST00000057185, NM_029357, uc008eru.1_5end |
EntrezGene: | Pcdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.14e-11 | 25 |
endodermal cell | 3.50e-10 | 20 |
intestinal epithelial cell | 6.53e-10 | 9 |
epithelial cell of alimentary canal | 6.53e-10 | 9 |
endo-epithelial cell | 1.35e-08 | 15 |
brush border epithelial cell | 1.39e-07 | 6 |
gut absorptive cell | 1.39e-07 | 6 |
enterocyte | 1.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.50e-28 | 47 |
intestine | 5.97e-28 | 31 |
endoderm-derived structure | 2.39e-20 | 118 |
endoderm | 2.39e-20 | 118 |
presumptive endoderm | 2.39e-20 | 118 |
digestive system | 2.84e-19 | 116 |
digestive tract | 2.84e-19 | 116 |
primitive gut | 2.84e-19 | 116 |
subdivision of digestive tract | 8.82e-18 | 114 |
mucosa | 5.53e-16 | 15 |
intestinal mucosa | 3.57e-14 | 13 |
wall of intestine | 3.57e-14 | 13 |
gastrointestinal system mucosa | 3.57e-14 | 13 |
organ component layer | 1.12e-11 | 24 |
epithelium of mucosa | 6.53e-10 | 9 |
gastrointestinal system epithelium | 6.53e-10 | 9 |
intestinal epithelium | 6.53e-10 | 9 |
simple columnar epithelium | 1.32e-07 | 11 |