FFCP PHASE1:Mm9::chr18:38369296..38369324,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:38369296..38369324,-
|short_description=p5@Pcdh1
|description=CAGE_peak_5_at_Pcdh1_5end
|association_with_transcript=91bp_to_ENSMUST00000057185,NM_029357,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75599 | |EntrezGene=75599 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFX3 | |UniProt=Q8CFX3 | ||
|association_with_transcript=91bp_to_ENSMUST00000057185,NM_029357,uc008eru.1_5end | |||
|cluster_id=chr18:38369296..38369324,- | |||
|description=CAGE_peak_5_at_Pcdh1_5end | |||
|id=chr18:38369296..38369324,- | |||
|ontology_enrichment_celltype=CL:0002563!1.20e-08!9;CL:0002251!1.20e-08!9;CL:0000066!1.74e-08!25;CL:0002076!2.18e-07!15;CL:0000075!4.85e-07!7;CL:0000239!5.57e-07!6;CL:0000677!5.57e-07!6;CL:0000212!5.57e-07!6;CL:0000584!5.57e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.56e-13,6;CL:0000677,4.56e-13,6;CL:0000584,4.56e-13,6;CL:0000075,4.40e-11,7;CL:0002563,1.95e-08,9;CL:0002251,1.95e-08,9;CL:0000682,5.59e-07,3;CL:0000066,9.84e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.90e-21!59;UBERON:0000160!1.68e-18!43;UBERON:0000344!5.01e-14!15;UBERON:0001242!1.82e-12!13;UBERON:0000060!1.82e-12!13;UBERON:0001262!1.82e-12!13;UBERON:0004786!1.82e-12!13;UBERON:0001007!3.47e-12!128;UBERON:0001555!3.47e-12!128;UBERON:0007026!3.47e-12!128;UBERON:0004119!1.07e-11!130;UBERON:0000925!1.07e-11!130;UBERON:0006595!1.07e-11!130;UBERON:0004921!4.15e-11!126;UBERON:0004185!4.15e-11!126;UBERON:0004923!8.76e-09!24;UBERON:0003350!1.20e-08!9;UBERON:0004808!1.20e-08!9;UBERON:0001277!1.20e-08!9;UBERON:0000485!1.15e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.91e-36,31;UBERON:0005409,2.95e-35,47;UBERON:0000344,6.06e-19,15;UBERON:0001007,2.53e-16,116;UBERON:0001555,2.53e-16,116;UBERON:0007026,2.53e-16,116;UBERON:0004119,6.62e-16,118;UBERON:0000925,6.62e-16,118;UBERON:0006595,6.62e-16,118;UBERON:0001242,9.66e-16,13;UBERON:0001262,9.66e-16,13;UBERON:0004786,9.66e-16,13;UBERON:0004921,2.01e-14,114;UBERON:0004923,1.26e-12,24;UBERON:0002108,2.36e-09,4;UBERON:0003350,1.95e-08,9;UBERON:0004808,1.95e-08,9;UBERON:0001277,1.95e-08,9;UBERON:0000331,2.13e-07,3;UBERON:0002116,2.13e-07,3;UBERON:0001204,2.13e-07,3;UBERON:0001168,2.13e-07,3;UBERON:0000485,9.38e-07,11 | |||
|phase1_expression=0,11.8651638597383,6.82498859084304,11.4936400296595,10.5188103288733,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,7.46501553349526,3.87685796543167,1.29282739611533,6.65081968097309,7.81293402255785,3.10422714917427,0,0,0,0.577703239502549,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,1.3599426674155,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,1.25602267690966,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,7.45567044872489,0,0,5.8755122697976,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8601015832223,3.70230793328962,0.213288250535234,0.464473343720877,0.515469845288373,0.403367049246685,1.11189021922435,1.14135375667535,7.11793592316767,3.45867804920423,3.77002813200404,3.78017296878187,3.70431765526328,7.19055526923377,6.26800344636613,7.56736838366595,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.757736633841335,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.807322133479528,0.663442174209714,0.716234064018819,0.820704498725306,6.41257840585672,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0.648032044930808,0.627264888043406,2.40198820120795,2.15782954215713,2.64491058321075,4.18809507174447,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.964205318604,0,0,0.503653849092235,0,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.578719832943424,1.24905288968973,0.233931608445408,0.859484216193193,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,11.8651638597383,6.82498859084304,11.4936400296595,10.5188103288733,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.83527424853736,7.46501553349526,3.87685796543167,1.29282739611533,6.65081968097309,7.81293402255785,3.10422714917427,0,0,0,0.577703239502549,0.831173226792462,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0,1.3599426674155,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.760079596425296,0.505524445014783,1.25602267690966,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,7.45567044872489,0,0,5.8755122697976,0,0,0,0,0,0.125654352112864,0.347648640384553,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0.556094498451196,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8601015832223,3.70230793328962,0.213288250535234,0.464473343720877,0.515469845288373,0.403367049246685,1.11189021922435,1.14135375667535,7.11793592316767,3.45867804920423,3.77002813200404,3.78017296878187,3.70431765526328,7.19055526923377,6.26800344636613,7.56736838366595,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11642284300551,0.312037673114561,0.757736633841335,0.358794827043824,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.807322133479528,0.663442174209714,0.716234064018819,0.820704498725306,6.41257840585672,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0.406638934253697,0.648032044930808,0.627264888043406,2.40198820120795,2.15782954215713,2.64491058321075,4.18809507174447,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.964205318604,0,0,0.503653849092235,0,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.578719832943424,1.24905288968973,0.233931608445408,0.859484216193193,0,0.220591419119515,0.463735671240843 | ||
|short_description=p5@Pcdh1 | |||
}} | }} |
Latest revision as of 06:13, 27 September 2015
Short description: | p5@Pcdh1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pcdh1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 91bp_to_ENSMUST00000057185, NM_029357, uc008eru.1_5end |
EntrezGene: | Pcdh1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.56e-13 | 6 |
gut absorptive cell | 4.56e-13 | 6 |
enterocyte | 4.56e-13 | 6 |
columnar/cuboidal epithelial cell | 4.40e-11 | 7 |
intestinal epithelial cell | 1.95e-08 | 9 |
epithelial cell of alimentary canal | 1.95e-08 | 9 |
M cell of gut | 5.59e-07 | 3 |
epithelial cell | 9.84e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.91e-36 | 31 |
gastrointestinal system | 2.95e-35 | 47 |
mucosa | 6.06e-19 | 15 |
digestive system | 2.53e-16 | 116 |
digestive tract | 2.53e-16 | 116 |
primitive gut | 2.53e-16 | 116 |
endoderm-derived structure | 6.62e-16 | 118 |
endoderm | 6.62e-16 | 118 |
presumptive endoderm | 6.62e-16 | 118 |
intestinal mucosa | 9.66e-16 | 13 |
wall of intestine | 9.66e-16 | 13 |
gastrointestinal system mucosa | 9.66e-16 | 13 |
subdivision of digestive tract | 2.01e-14 | 114 |
organ component layer | 1.26e-12 | 24 |
small intestine | 2.36e-09 | 4 |
epithelium of mucosa | 1.95e-08 | 9 |
gastrointestinal system epithelium | 1.95e-08 | 9 |
intestinal epithelium | 1.95e-08 | 9 |
ileal mucosa | 2.13e-07 | 3 |
ileum | 2.13e-07 | 3 |
mucosa of small intestine | 2.13e-07 | 3 |
wall of small intestine | 2.13e-07 | 3 |
simple columnar epithelium | 9.38e-07 | 11 |