FFCP PHASE1:Mm9::chr4:84851055..84851096,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20404 | |EntrezGene=20404 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2ALV3 | |UniProt=A2ALV3 | ||
|association_with_transcript=25bp_to_ENSMUST00000107188_5end | |association_with_transcript=25bp_to_ENSMUST00000107188_5end | ||
|cluster_id=chr4:84851055..84851096,+ | |||
|description=CAGE_peak_2_at_Sh3gl2_5end | |description=CAGE_peak_2_at_Sh3gl2_5end | ||
|id=chr4:84851055..84851096,+ | |id=chr4:84851055..84851096,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.20e-07!9;CL:0002251!2.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.29e-10,9;CL:0002251,2.29e-10,9;CL:0000239,3.99e-08,6;CL:0000677,3.99e-08,6;CL:0000584,3.99e-08,6;CL:0000075,9.77e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.16e-11!43;UBERON:0000344!2.88e-11!15;UBERON:0005409!5.70e-11!59;UBERON:0001242!4.28e-10!13;UBERON:0000060!4.28e-10!13;UBERON:0001262!4.28e-10!13;UBERON:0004786!4.28e-10!13;UBERON:0003350!2.20e-07!9;UBERON:0004808!2.20e-07!9;UBERON:0001277!2.20e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.39e-27,31;UBERON:0005409,6.66e-22,47;UBERON:0000344,3.17e-16,15;UBERON:0001242,1.87e-14,13;UBERON:0001262,1.87e-14,13;UBERON:0004786,1.87e-14,13;UBERON:0003350,2.29e-10,9;UBERON:0004808,2.29e-10,9;UBERON:0001277,2.29e-10,9;UBERON:0004923,3.64e-08,24;UBERON:0000485,5.68e-08,11 | |||
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| ||
|short_description=p2@Sh3gl2 | |short_description=p2@Sh3gl2 | ||
}} | }} |
Latest revision as of 06:13, 27 September 2015
Short description: | p2@Sh3gl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh3gl2_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000107188_5end |
EntrezGene: | Sh3gl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.29e-10 | 9 |
epithelial cell of alimentary canal | 2.29e-10 | 9 |
brush border epithelial cell | 3.99e-08 | 6 |
gut absorptive cell | 3.99e-08 | 6 |
enterocyte | 3.99e-08 | 6 |
columnar/cuboidal epithelial cell | 9.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.39e-27 | 31 |
gastrointestinal system | 6.66e-22 | 47 |
mucosa | 3.17e-16 | 15 |
intestinal mucosa | 1.87e-14 | 13 |
wall of intestine | 1.87e-14 | 13 |
gastrointestinal system mucosa | 1.87e-14 | 13 |
epithelium of mucosa | 2.29e-10 | 9 |
gastrointestinal system epithelium | 2.29e-10 | 9 |
intestinal epithelium | 2.29e-10 | 9 |
organ component layer | 3.64e-08 | 24 |
simple columnar epithelium | 5.68e-08 | 11 |