FFCP PHASE1:Mm9::chr13:20564559..20564605,+: Difference between revisions
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{{FFCP|EntrezGene=140580|HGNC=|MCL_coexpression_id=295|UniProt=|association_with_transcript=-253bp_to_NR_038122_5end|description=CAGE_peak_11_at_Elmo1_5end|id=chr13:20564559..20564605,+|ontology_enrichment_celltype=CL:0000117!1.16e-19!23;CL:0000337!1.16e-19!23;CL:0000540!1.34e-13!33;CL:0000047!1.34e-13!33;CL:0000031!1.34e-13!33;CL:0000404!1.34e-13!33;CL:0002319!6.31e-11!43;CL:0000221!1.94e-10!44;CL:0000133!1.94e-10!44;CL:0000393!5.48e-10!39;CL:0000211!5.48e-10!39;CL:0000055!5.57e-08!50;CL:0002609!4.73e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,6.50e-28,23;CL:0000337,6.50e-28,23;CL:0000540,3.84e-17,33;CL:0000047,3.84e-17,33;CL:0000031,3.84e-17,33;CL:0000404,3.84e-17,33;CL:0000393,2.20e-13,39;CL:0000211,2.20e-13,39;CL:0002319,1.75e-11,43;CL:0000221,4.57e-11,44;CL:0000133,4.57e-11,44;CL:0002609,1.48e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.51e-28!73;UBERON:0005743!5.51e-28!73;UBERON:0000073!1.76e-27!75;UBERON:0001016!1.76e-27!75;UBERON:0001049!2.30e-27!52;UBERON:0005068!2.30e-27!52;UBERON:0006241!2.30e-27!52;UBERON:0007135!2.30e-27!52;UBERON:0000033!4.35e-27!63;UBERON:0002346!3.23e-26!71;UBERON:0003075!3.23e-26!71;UBERON:0007284!3.23e-26!71;UBERON:0000955!5.12e-26!50;UBERON:0006238!5.12e-26!50;UBERON:0002616!5.43e-25!49;UBERON:0002020!1.51e-24!34;UBERON:0003056!4.97e-24!49;UBERON:0004121!1.03e-23!102;UBERON:0000924!1.03e-23!102;UBERON:0006601!1.03e-23!102;UBERON:0003080!5.58e-21!40;UBERON:0002791!1.84e-20!29;UBERON:0003528!1.84e-20!29;UBERON:0001893!1.84e-20!29;UBERON:0002780!3.64e-20!39;UBERON:0001890!3.64e-20!39;UBERON:0006240!3.64e-20!39;UBERON:0007811!3.57e-15!86;UBERON:0000956!3.82e-14!21;UBERON:0001869!3.82e-14!21;UBERON:0000203!3.82e-14!21;UBERON:0000153!6.44e-13!94;UBERON:0002619!9.97e-11!17;UBERON:0002021!1.60e-08!10;UBERON:0000411!1.60e-08!10;UBERON:0001950!1.60e-08!10;UBERON:0002420!1.57e-07!8;UBERON:0007245!1.57e-07!8;UBERON:0010009!1.57e-07!8;UBERON:0010011!1.57e-07!8;UBERON:0000454!1.57e-07!8;UBERON:0003076!7.09e-07!12;UBERON:0003057!7.09e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.06e-35,34;UBERON:0000073,4.00e-34,54;UBERON:0001049,2.73e-30,52;UBERON:0005068,2.73e-30,52;UBERON:0006241,2.73e-30,52;UBERON:0007135,2.73e-30,52;UBERON:0003528,1.02e-29,29;UBERON:0002791,1.02e-29,29;UBERON:0001893,1.02e-29,29;UBERON:0001017,1.45e-28,73;UBERON:0001016,1.99e-27,75;UBERON:0000955,7.81e-27,47;UBERON:0006238,7.81e-27,47;UBERON:0002616,1.77e-25,46;UBERON:0003080,7.92e-25,40;UBERON:0002780,1.07e-23,39;UBERON:0001890,1.07e-23,39;UBERON:0006240,1.07e-23,39;UBERON:0002346,1.55e-23,64;UBERON:0003075,1.55e-23,64;UBERON:0007284,1.55e-23,64;UBERON:0000956,1.79e-20,21;UBERON:0001869,1.79e-20,21;UBERON:0000203,1.79e-20,21;UBERON:0003056,1.07e-19,49;UBERON:0004121,1.08e-19,95;UBERON:0000924,1.08e-19,95;UBERON:0006601,1.08e-19,95;UBERON:0010371,3.91e-19,73;UBERON:0002619,1.82e-15,17;UBERON:0010314,9.27e-13,92;UBERON:0002021,1.09e-11,10;UBERON:0000411,1.09e-11,10;UBERON:0001950,1.09e-11,10;UBERON:0002420,3.00e-10,8;UBERON:0007245,3.00e-10,8;UBERON:0010009,3.00e-10,8;UBERON:0010011,3.00e-10,8;UBERON:0000454,3.00e-10,8;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0000025,1.23e-07,114;UBERON:0001948,5.60e-07,5;UBERON:0002315,5.60e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.65327859977075,7.93486468908049,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,5.70292867696627,4.99521971827255,5.67877395648731,1.71390590642282,2.65042249141936,9.0643191419066,10.2554653989513,11.9498442259303,2.20231761998777,1.53224805702225,1.84327839907492,7.12185953743047,6.03818447775904,5.2091337055676,1.3959149950069,1.68828783009504,1.37518422999129,5.59794312399969,4.27115042397309,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,0.41889341362691,0,0,0,0,3.59497534571574,4.11750542536764,13.0680526197379,3.99795936442236,2.04572365864264,6.02585329222724,3.56930778749067,0,0,0,0.631325567659422,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.340182495756639,0.896796041993948,0.655912071918102,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,1.89260953707715,10.8049842998249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0,0,0,0,0,0,0.445597348164788,0.566153061577665,0,0,0,14.4594592389813,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.608929898229199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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140580 | |||
|HGNC= | |||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-253bp_to_NR_038122_5end | |||
|cluster_id=chr13:20564559..20564605,+ | |||
|description=CAGE_peak_11_at_Elmo1_5end | |||
|id=chr13:20564559..20564605,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.16e-19!23;CL:0000337!1.16e-19!23;CL:0000540!1.34e-13!33;CL:0000047!1.34e-13!33;CL:0000031!1.34e-13!33;CL:0000404!1.34e-13!33;CL:0002319!6.31e-11!43;CL:0000221!1.94e-10!44;CL:0000133!1.94e-10!44;CL:0000393!5.48e-10!39;CL:0000211!5.48e-10!39;CL:0000055!5.57e-08!50;CL:0002609!4.73e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.50e-28,23;CL:0000337,6.50e-28,23;CL:0000540,3.84e-17,33;CL:0000047,3.84e-17,33;CL:0000031,3.84e-17,33;CL:0000404,3.84e-17,33;CL:0000393,2.20e-13,39;CL:0000211,2.20e-13,39;CL:0002319,1.75e-11,43;CL:0000221,4.57e-11,44;CL:0000133,4.57e-11,44;CL:0002609,1.48e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.51e-28!73;UBERON:0005743!5.51e-28!73;UBERON:0000073!1.76e-27!75;UBERON:0001016!1.76e-27!75;UBERON:0001049!2.30e-27!52;UBERON:0005068!2.30e-27!52;UBERON:0006241!2.30e-27!52;UBERON:0007135!2.30e-27!52;UBERON:0000033!4.35e-27!63;UBERON:0002346!3.23e-26!71;UBERON:0003075!3.23e-26!71;UBERON:0007284!3.23e-26!71;UBERON:0000955!5.12e-26!50;UBERON:0006238!5.12e-26!50;UBERON:0002616!5.43e-25!49;UBERON:0002020!1.51e-24!34;UBERON:0003056!4.97e-24!49;UBERON:0004121!1.03e-23!102;UBERON:0000924!1.03e-23!102;UBERON:0006601!1.03e-23!102;UBERON:0003080!5.58e-21!40;UBERON:0002791!1.84e-20!29;UBERON:0003528!1.84e-20!29;UBERON:0001893!1.84e-20!29;UBERON:0002780!3.64e-20!39;UBERON:0001890!3.64e-20!39;UBERON:0006240!3.64e-20!39;UBERON:0007811!3.57e-15!86;UBERON:0000956!3.82e-14!21;UBERON:0001869!3.82e-14!21;UBERON:0000203!3.82e-14!21;UBERON:0000153!6.44e-13!94;UBERON:0002619!9.97e-11!17;UBERON:0002021!1.60e-08!10;UBERON:0000411!1.60e-08!10;UBERON:0001950!1.60e-08!10;UBERON:0002420!1.57e-07!8;UBERON:0007245!1.57e-07!8;UBERON:0010009!1.57e-07!8;UBERON:0010011!1.57e-07!8;UBERON:0000454!1.57e-07!8;UBERON:0003076!7.09e-07!12;UBERON:0003057!7.09e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.06e-35,34;UBERON:0000073,4.00e-34,54;UBERON:0001049,2.73e-30,52;UBERON:0005068,2.73e-30,52;UBERON:0006241,2.73e-30,52;UBERON:0007135,2.73e-30,52;UBERON:0003528,1.02e-29,29;UBERON:0002791,1.02e-29,29;UBERON:0001893,1.02e-29,29;UBERON:0001017,1.45e-28,73;UBERON:0001016,1.99e-27,75;UBERON:0000955,7.81e-27,47;UBERON:0006238,7.81e-27,47;UBERON:0002616,1.77e-25,46;UBERON:0003080,7.92e-25,40;UBERON:0002780,1.07e-23,39;UBERON:0001890,1.07e-23,39;UBERON:0006240,1.07e-23,39;UBERON:0002346,1.55e-23,64;UBERON:0003075,1.55e-23,64;UBERON:0007284,1.55e-23,64;UBERON:0000956,1.79e-20,21;UBERON:0001869,1.79e-20,21;UBERON:0000203,1.79e-20,21;UBERON:0003056,1.07e-19,49;UBERON:0004121,1.08e-19,95;UBERON:0000924,1.08e-19,95;UBERON:0006601,1.08e-19,95;UBERON:0010371,3.91e-19,73;UBERON:0002619,1.82e-15,17;UBERON:0010314,9.27e-13,92;UBERON:0002021,1.09e-11,10;UBERON:0000411,1.09e-11,10;UBERON:0001950,1.09e-11,10;UBERON:0002420,3.00e-10,8;UBERON:0007245,3.00e-10,8;UBERON:0010009,3.00e-10,8;UBERON:0010011,3.00e-10,8;UBERON:0000454,3.00e-10,8;UBERON:0000369,4.35e-08,5;UBERON:0002435,4.35e-08,5;UBERON:0000204,4.35e-08,5;UBERON:0010082,4.35e-08,5;UBERON:0000025,1.23e-07,114;UBERON:0001948,5.60e-07,5;UBERON:0002315,5.60e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,4.65327859977075,7.93486468908049,4.43681982454325,0,0,0,0,0,0.299600110518405,0.384218305321555,5.70292867696627,4.99521971827255,5.67877395648731,1.71390590642282,2.65042249141936,9.0643191419066,10.2554653989513,11.9498442259303,2.20231761998777,1.53224805702225,1.84327839907492,7.12185953743047,6.03818447775904,5.2091337055676,1.3959149950069,1.68828783009504,1.37518422999129,5.59794312399969,4.27115042397309,3.35519002485541,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,4.68449275218475,0.41889341362691,0,0,0,0,3.59497534571574,4.11750542536764,13.0680526197379,3.99795936442236,2.04572365864264,6.02585329222724,3.56930778749067,0,0,0,0.631325567659422,0.390361328888111,0.229902104433473,0.540186389416048,0.150704817835715,0.340182495756639,0.896796041993948,0.655912071918102,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,1.89260953707715,10.8049842998249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,1.64096361229084,0,0,0,0,0,0,0.445597348164788,0.566153061577665,0,0,0,14.4594592389813,0,0,0,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,5.15605962095457,3.09335728218638,2.05524755931193,3.7769694869485,2.02506750069542,2.2516060161211,1.35942722695261,3.62432218226274,1.14166082342594,0.798049746802062,2.39027048055788,1.21553358534147,1.04806581313991,0.183843508450014,1.55572709461131,2.06035057238894,1.28367683836726,1.51618327058278,0.25347929989024,0.565879024158229,1.21733959710847,1.21647789569252,1.37845125493472,1.90517476513229,1.39061191133827,0.77163688185482,0.824171801606613,1.61918812147837,1.37147700954166,1.4198064492747,0.715308569841963,1.74415699958794,1.2234219453993,1.01537529470012,0.914639864363863,1.31534855718921,1.08643291076689,1.68342681497322,2.13543032623513,0.689531376628944,2.04615521584845,1.39443157067369,0.578719832943424,2.99772693525535,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0.463735671240843 | |||
|short_description=p11@Elmo1 | |||
}} |
Latest revision as of 05:57, 27 September 2015
Short description: | p11@Elmo1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Elmo1_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | -253bp_to_NR_038122_5end |
EntrezGene: | Elmo1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.50e-28 | 23 |
neuroblast (sensu Vertebrata) | 6.50e-28 | 23 |
neuron | 3.84e-17 | 33 |
neuronal stem cell | 3.84e-17 | 33 |
neuroblast | 3.84e-17 | 33 |
electrically signaling cell | 3.84e-17 | 33 |
electrically responsive cell | 2.20e-13 | 39 |
electrically active cell | 2.20e-13 | 39 |
neural cell | 1.75e-11 | 43 |
ectodermal cell | 4.57e-11 | 44 |
neurectodermal cell | 4.57e-11 | 44 |
neuron of cerebral cortex | 1.48e-09 | 6 |