FFCP PHASE1:Mm9::chr11:121090540..121090606,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:121090540..121090606,- to FFCP PHASE1:Mm9::chr11:121090540..121090606,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217370 | |EntrezGene=217370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q3W5,Q3TYS2 | |UniProt=E9Q3W5,Q3TYS2 | ||
|association_with_transcript=0bp_to_ENSMUST00000169393,uc007mvn.1,uc007mvo.1_5end | |||
|cluster_id=chr11:121090540..121090606,- | |||
|description=CAGE_peak_1_at_BC017643_5end | |||
|id=chr11:121090540..121090606,- | |||
|ontology_enrichment_celltype=CL:0000034!1.43e-18!97;CL:0000723!5.72e-17!91;CL:0000048!5.72e-17!91;CL:0000144!7.48e-17!121;CL:0000012!7.48e-17!121;CL:0002371!6.18e-16!118;CL:0000988!3.63e-15!32;CL:0002032!3.63e-15!32;CL:0000037!3.63e-15!32;CL:0000566!3.63e-15!32;CL:0000837!3.63e-15!32;CL:0000548!3.20e-14!115;CL:0000004!3.20e-14!115;CL:0000255!3.20e-14!115;CL:0000219!5.15e-14!54;CL:0002320!6.04e-14!46;CL:0000134!6.04e-14!46;CL:0002031!2.03e-12!25;CL:0000063!1.53e-08!66;CL:0000049!2.20e-08!19;CL:0000838!3.29e-08!12;CL:0000738!4.84e-08!17;CL:0002087!4.84e-08!17;CL:0000542!4.97e-08!13;CL:0000051!4.97e-08!13;CL:0000084!1.39e-07!11;CL:0000827!1.39e-07!11;CL:0000763!5.29e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.43e-18,97;CL:0000723,5.72e-17,91;CL:0000048,5.72e-17,91;CL:0000988,3.63e-15,32;CL:0002032,3.63e-15,32;CL:0000037,3.63e-15,32;CL:0000837,3.63e-15,32;CL:0000219,5.15e-14,54;CL:0002320,6.04e-14,46;CL:0000134,6.04e-14,46;CL:0002031,2.03e-12,25;CL:0000049,2.20e-08,19;CL:0000838,3.29e-08,12;CL:0000738,4.84e-08,17;CL:0002087,4.84e-08,17;CL:0000542,4.97e-08,13;CL:0000051,4.97e-08,13;CL:0000084,1.39e-07,11;CL:0000827,1.39e-07,11;CL:0000763,5.29e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.33e-17!48;UBERON:0002390!1.33e-16!45;UBERON:0003061!1.33e-16!45;UBERON:0002384!6.04e-14!46;UBERON:0002405!5.91e-11!70;UBERON:0003081!2.09e-10!88;UBERON:0004177!3.59e-10!29;UBERON:0002204!1.06e-09!32;UBERON:0002370!2.15e-08!23;UBERON:0000974!2.15e-08!23;UBERON:0004807!2.15e-08!23;UBERON:0005058!2.15e-08!23;UBERON:0003351!2.15e-08!23;UBERON:0009113!2.15e-08!23;UBERON:0003295!2.15e-08!23;UBERON:0009722!2.15e-08!23;UBERON:0005562!2.15e-08!23;UBERON:0007690!2.15e-08!23;UBERON:0003408!1.06e-07!24;UBERON:0000072!2.10e-07!27;UBERON:0002371!2.39e-07!16;UBERON:0001474!2.51e-07!22;UBERON:0004765!2.51e-07!22;UBERON:0001434!2.51e-07!22;UBERON:0006562!2.61e-07!24;UBERON:0001557!2.61e-07!24;UBERON:0001042!2.61e-07!24;UBERON:0008814!2.61e-07!24;UBERON:0009145!2.61e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.33e-17,48;UBERON:0002405,1.33e-17,48;UBERON:0002390,1.33e-16,45;UBERON:0003061,1.33e-16,45;UBERON:0002384,6.04e-14,46;UBERON:0004177,3.59e-10,29;UBERON:0005057,3.59e-10,29;UBERON:0003081,5.32e-10,87;UBERON:0002204,1.06e-09,32;UBERON:0000077,2.29e-09,35;UBERON:0002370,2.15e-08,23;UBERON:0000974,2.15e-08,23;UBERON:0004807,2.15e-08,23;UBERON:0005058,2.15e-08,23;UBERON:0003351,2.15e-08,23;UBERON:0009113,2.15e-08,23;UBERON:0003295,2.15e-08,23;UBERON:0009722,2.15e-08,23;UBERON:0005562,2.15e-08,23;UBERON:0007690,2.15e-08,23;UBERON:0003408,1.06e-07,24;UBERON:0000926,1.78e-07,120;UBERON:0004120,1.78e-07,120;UBERON:0006603,1.78e-07,120;UBERON:0000072,2.10e-07,27;UBERON:0002371,2.39e-07,16;UBERON:0001474,2.51e-07,22;UBERON:0004765,2.51e-07,22;UBERON:0001434,2.51e-07,22;UBERON:0006562,2.61e-07,24;UBERON:0001557,2.61e-07,24;UBERON:0001042,2.61e-07,24;UBERON:0008814,2.61e-07,24;UBERON:0009145,2.61e-07,24 | |||
|phase1_expression=9.28863313207805,11.5161884520989,9.55498402718026,7.56160528267075,7.01254021924886,8.39396359559449,8.1764424208434,55.6521524033194,26.0459135980583,27.1514850533512,30.3055803759144,27.042761899419,35.2673503658284,48.2560621352866,17.3217076144145,17.8178235303047,15.3903613188192,52.8399126975048,56.9024899463816,66.6291753322907,7.313722952992,32.865304847493,28.9931765944218,13.2793710918528,15.3704218315004,14.9300310669905,9.47676391549965,11.4199753323521,9.31114755336232,9.32511480111744,16.4080577884925,22.8611042445467,17.221814052368,31.6963362030877,6.06588401477677,7.48055904113216,4.69589519403449,65.7094660256945,57.8188154947612,60.7287543009606,78.8230193961559,86.0637311047642,72.3410426016419,20.0175940581168,14.5982780956101,15.4179271815813,8.60630478782843,9.59310688073965,18.4536393496956,17.1098311185369,12.3188051030319,8.62515386189829,46.6435644840507,22.4862264023517,21.8460969442602,13.3774906738692,17.4785398362642,14.4388185837684,19.624696703381,20.1016572123373,15.8457850876545,15.5868484751801,14.2287167377782,26.996991518442,34.6103226898441,36.2344858622511,12.583204641773,6.53171119046643,13.9980976616445,16.0657066614712,15.7743721013537,12.8542942981712,11.4851641294839,16.9037302916637,15.814502718009,22.0612508786405,13.2139057199266,9.44886301830389,8.75557239560588,17.2771036926554,17.9315781460723,15.106487746146,10.0505879640497,3.93933827022176,10.2374826010463,14.4368006882097,12.2439645487229,13.9799584368975,14.5394291199713,10.4288752947364,15.3628179011889,11.185510400758,3.39985666853875,8.63525106620507,3.24888208723835,2.24013443548668,8.56710962803686,14.827438064291,13.2490862347463,12.0135455333516,9.85903938436764,8.98285341900225,5.09610479413291,0,12.123498296628,12.4146334082798,10.1104889002957,5.1382745873577,24.081223179187,6.82833839698194,10.235634279202,9.13396434936424,8.07154240396205,9.64624899536784,7.05532242814229,6.1576629751541,7.91023896749996,4.77177877835708,16.8076004870476,8.8971767471075,15.9005893291483,17.9403843660032,7.45567044872489,6.44117753425404,8.16842156572475,9.45191104271788,24.5621005237137,23.3962065087429,20.2041661046173,8.98743836428936,5.49000723382352,6.40837195775608,6.43149984711423,6.64860189058859,6.64921742590592,9.24775199486219,8.7581852911272,17.1681619441928,10.3616330957807,4.20883711772948,11.7108398666433,11.4951052216736,6.48223667299257,10.5493372485001,7.0757959117381,9.73664274164858,11.3379086717272,3.3631438196072,8.62271971731369,11.535470890237,11.7887253189846,11.3981780862339,8.89751197521913,8.358051996532,11.7295817752528,15.1266042782055,23.1730351813367,18.2717014051448,22.7330799516474,7.45652781127807,9.61556845922494,9.36322719597277,6.62885259638589,8.85439042863317,7.55908853148153,6.27841650826101,8.85302224618743,6.42209383019432,7.73431294593358,6.40253109908471,5.18840381093477,7.45619935869195,7.68425403518677,7.91817870686193,4.6263788684108,8.74689205223918,8.59088835757875,5.02456076660734,11.0909890278322,10.6828869055802,9.665059599157,8.26902450955704,6.0042071838115,7.03834816616469,8.0669940462567,4.6115707322723,8.79673230800943,9.94782360205754,10.5280607044325,10.7858329038507,5.40345124686736,8.16479220342906,12.7077493638565,11.6533482861923,4.50830942692322,5.29493452397817,8.72786192254316,7.01358198903186,8.53693251177473,6.7900668070617,7.37894020854462,4.31890073726302,4.44678940630723,9.17648081438517,9.82794975566015,10.3436571697033,10.1430060694251,14.9529839046498,11.2035374783825,12.3709339103849,10.7009249671523,8.51140380883053,20.1275489138296,10.7920874823866,9.36113019343682,4.2938409251009,3.04975602987251,4.82443521363367,10.5309318394965,10.2325362356062,7.49638891633319,8.14776411720903,12.4385831592906,9.04533790185805,9.75978927632656,6.82967767502296,10.5615546551148,9.96591103419487,9.8861956567642,13.109065177259,12.9513736399422,12.0058718622655,25.6345182696763,29.3709069262103,9.83528546038072,7.45029215022778,6.42202359951168,10.4318401067061,12.2951209032507,3.53459298086122,9.78075480190396,7.80877488593277,7.97066571611356,8.36390792833932,9.58034298554295,9.90767857760913,8.90583543684768,10.5212108848072,8.69633111482352,5.46246237917072,7.52282451603824,13.8891170860459,8.95878276444668,8.41347627159931,2.65490276679926,9.71122544619926,10.2790009368015,7.54420319023592,6.496641643377,5.22639751504677,10.0787034335606,5.08947221268508,7.84294232446387,3.47640433729398,6.32511651449993,4.12542172992747,8.85142974959849,11.3438489239725,13.9707378485375,11.7885369267376,9.22169214939823,11.2372355089304,9.54384319492302,6.08929898229199,12.6722722354404,19.2767184486076,8.38007912608855,4.78170133530292,7.91175690809937,8.2025577902292,8.35606408021955,9.19189038572343,8.16146342563582,6.86073617438886,22.5549562653166,14.859854493352,14.0747840800981,14.3160027323565,16.403307326523,19.4461447225544,13.7682528295023,13.8551937800421,17.8277966207707,1.90934123603023,8.69923982348122,9.55601495496189,10.1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| |phase1_expression=9.28863313207805,11.5161884520989,9.55498402718026,7.56160528267075,7.01254021924886,8.39396359559449,8.1764424208434,55.6521524033194,26.0459135980583,27.1514850533512,30.3055803759144,27.042761899419,35.2673503658284,48.2560621352866,17.3217076144145,17.8178235303047,15.3903613188192,52.8399126975048,56.9024899463816,66.6291753322907,7.313722952992,32.865304847493,28.9931765944218,13.2793710918528,15.3704218315004,14.9300310669905,9.47676391549965,11.4199753323521,9.31114755336232,9.32511480111744,16.4080577884925,22.8611042445467,17.221814052368,31.6963362030877,6.06588401477677,7.48055904113216,4.69589519403449,65.7094660256945,57.8188154947612,60.7287543009606,78.8230193961559,86.0637311047642,72.3410426016419,20.0175940581168,14.5982780956101,15.4179271815813,8.60630478782843,9.59310688073965,18.4536393496956,17.1098311185369,12.3188051030319,8.62515386189829,46.6435644840507,22.4862264023517,21.8460969442602,13.3774906738692,17.4785398362642,14.4388185837684,19.624696703381,20.1016572123373,15.8457850876545,15.5868484751801,14.2287167377782,26.996991518442,34.6103226898441,36.2344858622511,12.583204641773,6.53171119046643,13.9980976616445,16.0657066614712,15.7743721013537,12.8542942981712,11.4851641294839,16.9037302916637,15.814502718009,22.0612508786405,13.2139057199266,9.44886301830389,8.75557239560588,17.2771036926554,17.9315781460723,15.106487746146,10.0505879640497,3.93933827022176,10.2374826010463,14.4368006882097,12.2439645487229,13.9799584368975,14.5394291199713,10.4288752947364,15.3628179011889,11.185510400758,3.39985666853875,8.63525106620507,3.24888208723835,2.24013443548668,8.56710962803686,14.827438064291,13.2490862347463,12.0135455333516,9.85903938436764,8.98285341900225,5.09610479413291,0,12.123498296628,12.4146334082798,10.1104889002957,5.1382745873577,24.081223179187,6.82833839698194,10.235634279202,9.13396434936424,8.07154240396205,9.64624899536784,7.05532242814229,6.1576629751541,7.91023896749996,4.77177877835708,16.8076004870476,8.8971767471075,15.9005893291483,17.9403843660032,7.45567044872489,6.44117753425404,8.16842156572475,9.45191104271788,24.5621005237137,23.3962065087429,20.2041661046173,8.98743836428936,5.49000723382352,6.40837195775608,6.43149984711423,6.64860189058859,6.64921742590592,9.24775199486219,8.7581852911272,17.1681619441928,10.3616330957807,4.20883711772948,11.7108398666433,11.4951052216736,6.48223667299257,10.5493372485001,7.0757959117381,9.73664274164858,11.3379086717272,3.3631438196072,8.62271971731369,11.535470890237,11.7887253189846,11.3981780862339,8.89751197521913,8.358051996532,11.7295817752528,15.1266042782055,23.1730351813367,18.2717014051448,22.7330799516474,7.45652781127807,9.61556845922494,9.36322719597277,6.62885259638589,8.85439042863317,7.55908853148153,6.27841650826101,8.85302224618743,6.42209383019432,7.73431294593358,6.40253109908471,5.18840381093477,7.45619935869195,7.68425403518677,7.91817870686193,4.6263788684108,8.74689205223918,8.59088835757875,5.02456076660734,11.0909890278322,10.6828869055802,9.665059599157,8.26902450955704,6.0042071838115,7.03834816616469,8.0669940462567,4.6115707322723,8.79673230800943,9.94782360205754,10.5280607044325,10.7858329038507,5.40345124686736,8.16479220342906,12.7077493638565,11.6533482861923,4.50830942692322,5.29493452397817,8.72786192254316,7.01358198903186,8.53693251177473,6.7900668070617,7.37894020854462,4.31890073726302,4.44678940630723,9.17648081438517,9.82794975566015,10.3436571697033,10.1430060694251,14.9529839046498,11.2035374783825,12.3709339103849,10.7009249671523,8.51140380883053,20.1275489138296,10.7920874823866,9.36113019343682,4.2938409251009,3.04975602987251,4.82443521363367,10.5309318394965,10.2325362356062,7.49638891633319,8.14776411720903,12.4385831592906,9.04533790185805,9.75978927632656,6.82967767502296,10.5615546551148,9.96591103419487,9.8861956567642,13.109065177259,12.9513736399422,12.0058718622655,25.6345182696763,29.3709069262103,9.83528546038072,7.45029215022778,6.42202359951168,10.4318401067061,12.2951209032507,3.53459298086122,9.78075480190396,7.80877488593277,7.97066571611356,8.36390792833932,9.58034298554295,9.90767857760913,8.90583543684768,10.5212108848072,8.69633111482352,5.46246237917072,7.52282451603824,13.8891170860459,8.95878276444668,8.41347627159931,2.65490276679926,9.71122544619926,10.2790009368015,7.54420319023592,6.496641643377,5.22639751504677,10.0787034335606,5.08947221268508,7.84294232446387,3.47640433729398,6.32511651449993,4.12542172992747,8.85142974959849,11.3438489239725,13.9707378485375,11.7885369267376,9.22169214939823,11.2372355089304,9.54384319492302,6.08929898229199,12.6722722354404,19.2767184486076,8.38007912608855,4.78170133530292,7.91175690809937,8.2025577902292,8.35606408021955,9.19189038572343,8.16146342563582,6.86073617438886,22.5549562653166,14.859854493352,14.0747840800981,14.3160027323565,16.403307326523,19.4461447225544,13.7682528295023,13.8551937800421,17.8277966207707,1.90934123603023,8.69923982348122,9.55601495496189,10.1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| ||
|short_description=p1@BC017643 | |||
}} | }} |
Latest revision as of 03:45, 27 September 2015
Short description: | p1@BC017643 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC017643_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000169393, uc007mvn.1, uc007mvo.1_5end |
EntrezGene: | BC017643 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.43e-18 | 97 |
somatic stem cell | 5.72e-17 | 91 |
multi fate stem cell | 5.72e-17 | 91 |
hematopoietic cell | 3.63e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.63e-15 | 32 |
hematopoietic stem cell | 3.63e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.63e-15 | 32 |
motile cell | 5.15e-14 | 54 |
connective tissue cell | 6.04e-14 | 46 |
mesenchymal cell | 6.04e-14 | 46 |
hematopoietic lineage restricted progenitor cell | 2.03e-12 | 25 |
common myeloid progenitor | 2.20e-08 | 19 |
lymphoid lineage restricted progenitor cell | 3.29e-08 | 12 |
leukocyte | 4.84e-08 | 17 |
nongranular leukocyte | 4.84e-08 | 17 |
lymphocyte | 4.97e-08 | 13 |
common lymphoid progenitor | 4.97e-08 | 13 |
T cell | 1.39e-07 | 11 |
pro-T cell | 1.39e-07 | 11 |
myeloid cell | 5.29e-07 | 16 |