FFCP PHASE1:Mm9::chr6:38304601..38304604,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=78781 | |EntrezGene=78781 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1952 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UPF5,G3X9X5,Q8K302 | |UniProt=Q3UPF5,G3X9X5,Q8K302 | ||
|association_with_transcript=0bp_to_ENSMUST00000031850,ENSMUST00000114898,NM_028421,NM_028864,uc009bjz.2,uc009bka.1,uc012eka.1_5end | |association_with_transcript=0bp_to_ENSMUST00000031850,ENSMUST00000114898,NM_028421,NM_028864,uc009bjz.2,uc009bka.1,uc012eka.1_5end | ||
|cluster_id=chr6:38304601..38304604,- | |||
|description=CAGE_peak_3_at_Zc3hav1_5end | |description=CAGE_peak_3_at_Zc3hav1_5end | ||
|id=chr6:38304601..38304604,- | |id=chr6:38304601..38304604,- | ||
|ontology_enrichment_celltype=CL:0000988!9.98e-09!32;CL:0002032!9.98e-09!32;CL:0000037!9.98e-09!32;CL:0000566!9.98e-09!32;CL:0000837!9.98e-09!32;CL:0002031!4.38e-08!25;CL:0002320!1.56e-07!46;CL:0000134!1.56e-07!46;CL:0000838!4.20e-07!12;CL:0000791!7.53e-07!9;CL:0000789!7.53e-07!9;CL:0002420!7.53e-07!9;CL:0002419!7.53e-07!9;CL:0000790!7.53e-07!9 | |ontology_enrichment_celltype=CL:0000988!9.98e-09!32;CL:0002032!9.98e-09!32;CL:0000037!9.98e-09!32;CL:0000566!9.98e-09!32;CL:0000837!9.98e-09!32;CL:0002031!4.38e-08!25;CL:0002320!1.56e-07!46;CL:0000134!1.56e-07!46;CL:0000838!4.20e-07!12;CL:0000791!7.53e-07!9;CL:0000789!7.53e-07!9;CL:0002420!7.53e-07!9;CL:0002419!7.53e-07!9;CL:0000790!7.53e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.89e-11,32;CL:0002032,1.89e-11,32;CL:0000037,1.89e-11,32;CL:0000837,1.89e-11,32;CL:0002031,2.84e-10,25;CL:0002320,2.87e-09,46;CL:0000134,2.87e-09,46;CL:0000791,3.54e-08,9;CL:0000789,3.54e-08,9;CL:0002420,3.54e-08,9;CL:0002419,3.54e-08,9;CL:0000790,3.54e-08,9;CL:0000838,4.29e-08,12;CL:0000084,2.56e-07,11;CL:0000827,2.56e-07,11;CL:0000624,2.60e-07,8;CL:0000219,3.25e-07,54;CL:0000542,4.15e-07,13;CL:0000051,4.15e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.80e-10!70;UBERON:0002193!9.04e-10!48;UBERON:0002390!2.60e-09!45;UBERON:0003061!2.60e-09!45;UBERON:0000926!1.01e-08!193;UBERON:0004120!1.01e-08!193;UBERON:0006603!1.01e-08!193;UBERON:0004177!1.41e-07!29;UBERON:0002384!1.56e-07!46;UBERON:0005057!2.41e-07!51;UBERON:0003081!3.76e-07!88 | |ontology_enrichment_uberon=UBERON:0002405!6.80e-10!70;UBERON:0002193!9.04e-10!48;UBERON:0002390!2.60e-09!45;UBERON:0003061!2.60e-09!45;UBERON:0000926!1.01e-08!193;UBERON:0004120!1.01e-08!193;UBERON:0006603!1.01e-08!193;UBERON:0004177!1.41e-07!29;UBERON:0002384!1.56e-07!46;UBERON:0005057!2.41e-07!51;UBERON:0003081!3.76e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.10e-13,48;UBERON:0002405,9.10e-13,48;UBERON:0002390,2.25e-12,45;UBERON:0003061,2.25e-12,45;UBERON:0000077,5.91e-11,35;UBERON:0000926,7.83e-10,120;UBERON:0004120,7.83e-10,120;UBERON:0006603,7.83e-10,120;UBERON:0004177,9.42e-10,29;UBERON:0005057,9.42e-10,29;UBERON:0002384,2.87e-09,46;UBERON:0003408,7.37e-08,24;UBERON:0000072,1.42e-07,27;UBERON:0002370,2.04e-07,23;UBERON:0000974,2.04e-07,23;UBERON:0004807,2.04e-07,23;UBERON:0005058,2.04e-07,23;UBERON:0003351,2.04e-07,23;UBERON:0009113,2.04e-07,23;UBERON:0003295,2.04e-07,23;UBERON:0009722,2.04e-07,23;UBERON:0005562,2.04e-07,23;UBERON:0007690,2.04e-07,23;UBERON:0006562,8.00e-07,24;UBERON:0001557,8.00e-07,24;UBERON:0001042,8.00e-07,24;UBERON:0008814,8.00e-07,24;UBERON:0009145,8.00e-07,24 | |||
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| ||
|short_description=p3@Zc3hav1 | |short_description=p3@Zc3hav1 | ||
}} | }} |
Latest revision as of 03:23, 27 September 2015
Short description: | p3@Zc3hav1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zc3hav1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1952 |
Association with transcript: | 0bp_to_ENSMUST00000031850, ENSMUST00000114898, NM_028421, NM_028864, uc009bjz.2, uc009bka.1, uc012eka.1_5end |
EntrezGene: | Zc3hav1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.89e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.89e-11 | 32 |
hematopoietic stem cell | 1.89e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.89e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 2.84e-10 | 25 |
connective tissue cell | 2.87e-09 | 46 |
mesenchymal cell | 2.87e-09 | 46 |
mature alpha-beta T cell | 3.54e-08 | 9 |
alpha-beta T cell | 3.54e-08 | 9 |
immature T cell | 3.54e-08 | 9 |
mature T cell | 3.54e-08 | 9 |
immature alpha-beta T cell | 3.54e-08 | 9 |
lymphoid lineage restricted progenitor cell | 4.29e-08 | 12 |
T cell | 2.56e-07 | 11 |
pro-T cell | 2.56e-07 | 11 |
CD4-positive, alpha-beta T cell | 2.60e-07 | 8 |
motile cell | 3.25e-07 | 54 |
lymphocyte | 4.15e-07 | 13 |
common lymphoid progenitor | 4.15e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.10e-13 | 48 |
immune system | 9.10e-13 | 48 |
hematopoietic system | 2.25e-12 | 45 |
blood island | 2.25e-12 | 45 |
mixed endoderm/mesoderm-derived structure | 5.91e-11 | 35 |
mesoderm | 7.83e-10 | 120 |
mesoderm-derived structure | 7.83e-10 | 120 |
presumptive mesoderm | 7.83e-10 | 120 |
hemopoietic organ | 9.42e-10 | 29 |
immune organ | 9.42e-10 | 29 |
connective tissue | 2.87e-09 | 46 |
gland of gut | 7.37e-08 | 24 |
segment of respiratory tract | 1.42e-07 | 27 |
thymus | 2.04e-07 | 23 |
neck | 2.04e-07 | 23 |
respiratory system epithelium | 2.04e-07 | 23 |
hemolymphoid system gland | 2.04e-07 | 23 |
pharyngeal epithelium | 2.04e-07 | 23 |
thymic region | 2.04e-07 | 23 |
pharyngeal gland | 2.04e-07 | 23 |
entire pharyngeal arch endoderm | 2.04e-07 | 23 |
thymus primordium | 2.04e-07 | 23 |
early pharyngeal endoderm | 2.04e-07 | 23 |
pharynx | 8.00e-07 | 24 |
upper respiratory tract | 8.00e-07 | 24 |
chordate pharynx | 8.00e-07 | 24 |
pharyngeal arch system | 8.00e-07 | 24 |
pharyngeal region of foregut | 8.00e-07 | 24 |