FFCP PHASE1:Mm9::chr4:57156450..57156496,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:57156450..57156496,-
|short_description=p3@Epb4.1l4b
|description=CAGE_peak_3_at_Epb4.1l4b_5end
|association_with_transcript=-141bp_to_ENSMUST00000030142,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54357 | |EntrezGene=54357 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JMC8,A2ALK6 | |UniProt=Q9JMC8,A2ALK6 | ||
|association_with_transcript=-141bp_to_ENSMUST00000030142,ENSMUST00000095076_5end | |||
|cluster_id=chr4:57156450..57156496,- | |||
|description=CAGE_peak_3_at_Epb4.1l4b_5end | |||
|id=chr4:57156450..57156496,- | |||
|ontology_enrichment_celltype=CL:0002563!9.06e-07!9;CL:0002251!9.06e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.10e-08,9;CL:0002251,3.10e-08,9;CL:0000075,6.88e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.60e-13!43;UBERON:0005409!5.13e-10!59;UBERON:0000344!2.19e-09!15;UBERON:0001242!8.08e-09!13;UBERON:0000060!8.08e-09!13;UBERON:0001262!8.08e-09!13;UBERON:0004786!8.08e-09!13;UBERON:0004119!1.38e-07!130;UBERON:0000925!1.38e-07!130;UBERON:0006595!1.38e-07!130;UBERON:0000485!1.98e-07!11;UBERON:0001007!4.86e-07!128;UBERON:0001555!4.86e-07!128;UBERON:0007026!4.86e-07!128;UBERON:0003350!9.06e-07!9;UBERON:0004808!9.06e-07!9;UBERON:0001277!9.06e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.06e-17,31;UBERON:0005409,2.73e-12,47;UBERON:0000344,1.41e-11,15;UBERON:0001242,7.49e-11,13;UBERON:0001262,7.49e-11,13;UBERON:0004786,7.49e-11,13;UBERON:0000485,4.46e-09,11;UBERON:0003350,3.10e-08,9;UBERON:0004808,3.10e-08,9;UBERON:0001277,3.10e-08,9;UBERON:0004923,4.16e-08,24;UBERON:0000010,1.36e-07,11;UBERON:0004119,1.80e-07,118;UBERON:0000925,1.80e-07,118;UBERON:0006595,1.80e-07,118;UBERON:0001007,7.64e-07,116;UBERON:0001555,7.64e-07,116;UBERON:0007026,7.64e-07,116 | |||
|phase1_expression=1.44133962394315,7.67745896806594,7.27998783023258,6.35174843744343,4.00716583957078,5.37213670118047,3.73780224952841,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,2.04103896362567,4.86525660884338,7.05239430675126,2.07990149631429,2.75291137280604,6.31655160526522,3.87685796543167,3.44753972297422,4.94060890586572,4.28451220591882,5.54326276638262,1.90509202037889,0.61506478758457,0,4.33277429626912,4.98703936075477,5.51257261908397,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,3.14216082844184,1.32521124570968,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.65993539510744,0.921639199537461,0.791317726381163,0.823388792421687,0.52091337055676,0,0,0.45839474333043,1.17851434189467,1.13897344639282,1.1183966749518,6.36100023998746,9.59758813356176,0.869593466105033,0.860423876981386,0,2.15881276655127,1.29955283489534,1.79210754838934,1.26399978118577,0.170430322578058,0,0,8.16891834704747,0,0,0,0.216491041011214,1.26679932737549,0.505524445014783,1.59857431606684,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0,12.1125534189843,0.144599356919912,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,2.92780797011547,2.51336048176146,3.57639877292028,1.7972268675888,1.19980546198682,0.762421362438388,0.299581278809645,0,0.628271760564322,1.04294592115366,0.511430914660661,0.20778804455956,0.811206315338788,0.407357455401265,0.870848794270651,1.51633655060205,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,1.35634336052144,2.4493139694478,1.0249097622788,1.68663104207512,2.06962696591213,0.862271971731369,0.567318240503458,0.703804496655795,0.43839146485515,0.556094498451196,1.74126083261083,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,2.64335026387038,1.85115396664481,0.639864751605702,0.928946687441754,2.44848176511977,4.84040459096022,2.2237804384487,2.85338439168839,2.84717436926707,3.29397909448022,6.53471542880701,3.97912944082302,4.28920991662064,1.79763881730844,2.16138049874694,3.78368419183298,0.189667900953082,0,1.1270773567308,0.203651327845314,1.16371492300575,1.26244475802573,2.15004226222475,2.21415221969403,1.09899109488962,1.60416313098341,1.48226313543574,0.166845105716094,0.393117990226406,0,0,0.482354319504834,0.25462585178142,1.15078454980324,0.972811360650212,1.64736847912849,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,0.717589654087649,0.482443521363367,2.95605104266567,0.37898282354097,0,0.339490171550376,0.469380496577004,1.17254380209271,3.09456733151818,4.87834119644497,1.10344600874334,1.32878813789265,1.43509291791738,1.63863314715738,1.20879487306127,2.74833211304872,0,0,8.35999264132362,9.10591262805617,0.80275294993896,0.937693492737625,0,0,2.52406575533005,1.56175497718655,3.23135096599198,8.36390792833932,2.45078541490634,3.39691836946599,4.45291771842384,2.04579100537918,3.16230222357219,0.321321316421807,1.13552068166615,0.178065603667255,1.14020871547503,1.97964147567043,0,1.21390318077491,0.302323556964751,1.50884063804718,0.590603785761546,2.15204603560749,3.10113951801865,2.18120237686503,2.49548164869305,1.58018378967908,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.658196082408484,1.8267896946876,3.05073220482823,2.33015277950202,1.7642271844397,2.14352128823924,2.42196640043858,5.30753739367772,4.77489376012546,6.89391778929257,2.91480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,4.07948231985253,3.35883485576779,3.31679937130617,0,0.632671987162271,0.813277868507395,1.94409613479242,2.09088296014469,2.62035076495413,1.88810084938749,3.38879168473877,0.785267825952089,2.98114438571124,3.72803587852155,0,0.448549638131936,0.330916980914195,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.911430693907651,1.15345278868282,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.403865799792591,0.609654453239999,0.604957110821043,0.584747284438515,0.577271049841977,0.467507608726276,1.81384306892169,0.221985953374065,0,0.167884616364078,2.70465431645067,0.93841237725591,2.19781949120718,4.50173596066038,0.501572104035363,1.12950368523413,0.460325236507177,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.838452650511929,0.367687016900028,0.222246727801615,1.03017528619447,0.64183841918363,0.758091635291392,1.01391719956096,0.943131706930381,0.561849044819294,0.832326981263301,0.918967503289812,0.476293691283074,0.927074607558844,0.9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| |phase1_expression=1.44133962394315,7.67745896806594,7.27998783023258,6.35174843744343,4.00716583957078,5.37213670118047,3.73780224952841,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0,0,2.04103896362567,4.86525660884338,7.05239430675126,2.07990149631429,2.75291137280604,6.31655160526522,3.87685796543167,3.44753972297422,4.94060890586572,4.28451220591882,5.54326276638262,1.90509202037889,0.61506478758457,0,4.33277429626912,4.98703936075477,5.51257261908397,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,3.14216082844184,1.32521124570968,0.122490799214954,0.0958454710182364,0,1.10115880999389,1.65993539510744,0.921639199537461,0.791317726381163,0.823388792421687,0.52091337055676,0,0,0.45839474333043,1.17851434189467,1.13897344639282,1.1183966749518,6.36100023998746,9.59758813356176,0.869593466105033,0.860423876981386,0,2.15881276655127,1.29955283489534,1.79210754838934,1.26399978118577,0.170430322578058,0,0,8.16891834704747,0,0,0,0.216491041011214,1.26679932737549,0.505524445014783,1.59857431606684,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0,12.1125534189843,0.144599356919912,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,2.92780797011547,2.51336048176146,3.57639877292028,1.7972268675888,1.19980546198682,0.762421362438388,0.299581278809645,0,0.628271760564322,1.04294592115366,0.511430914660661,0.20778804455956,0.811206315338788,0.407357455401265,0.870848794270651,1.51633655060205,0.420883711772948,0.260240885925407,0.459804208866946,0.900310649026746,1.35634336052144,2.4493139694478,1.0249097622788,1.68663104207512,2.06962696591213,0.862271971731369,0.567318240503458,0.703804496655795,0.43839146485515,0.556094498451196,1.74126083261083,1.23469281844766,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,0,0.102904612379284,2.64335026387038,1.85115396664481,0.639864751605702,0.928946687441754,2.44848176511977,4.84040459096022,2.2237804384487,2.85338439168839,2.84717436926707,3.29397909448022,6.53471542880701,3.97912944082302,4.28920991662064,1.79763881730844,2.16138049874694,3.78368419183298,0.189667900953082,0,1.1270773567308,0.203651327845314,1.16371492300575,1.26244475802573,2.15004226222475,2.21415221969403,1.09899109488962,1.60416313098341,1.48226313543574,0.166845105716094,0.393117990226406,0,0,0.482354319504834,0.25462585178142,1.15078454980324,0.972811360650212,1.64736847912849,2.87536413054709,1.48856379067401,1.87222603868736,1.51547326768267,0.717589654087649,0.482443521363367,2.95605104266567,0.37898282354097,0,0.339490171550376,0.469380496577004,1.17254380209271,3.09456733151818,4.87834119644497,1.10344600874334,1.32878813789265,1.43509291791738,1.63863314715738,1.20879487306127,2.74833211304872,0,0,8.35999264132362,9.10591262805617,0.80275294993896,0.937693492737625,0,0,2.52406575533005,1.56175497718655,3.23135096599198,8.36390792833932,2.45078541490634,3.39691836946599,4.45291771842384,2.04579100537918,3.16230222357219,0.321321316421807,1.13552068166615,0.178065603667255,1.14020871547503,1.97964147567043,0,1.21390318077491,0.302323556964751,1.50884063804718,0.590603785761546,2.15204603560749,3.10113951801865,2.18120237686503,2.49548164869305,1.58018378967908,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0.658196082408484,1.8267896946876,3.05073220482823,2.33015277950202,1.7642271844397,2.14352128823924,2.42196640043858,5.30753739367772,4.77489376012546,6.89391778929257,2.91480836629851,0.927126510052548,0,0.206386867963223,0,0,0,0,4.07948231985253,3.35883485576779,3.31679937130617,0,0.632671987162271,0.813277868507395,1.94409613479242,2.09088296014469,2.62035076495413,1.88810084938749,3.38879168473877,0.785267825952089,2.98114438571124,3.72803587852155,0,0.448549638131936,0.330916980914195,0.583353565032143,0.258319646955462,0.168956125490778,0.117357238645754,0.911430693907651,1.15345278868282,0.241584120826006,0.288030006257865,0,0.405450430580328,0.205421914329655,0.25984164595559,0.358053391334963,0.596044064343795,0.120195449519969,0.147689527174577,0.403865799792591,0.609654453239999,0.604957110821043,0.584747284438515,0.577271049841977,0.467507608726276,1.81384306892169,0.221985953374065,0,0.167884616364078,2.70465431645067,0.93841237725591,2.19781949120718,4.50173596066038,0.501572104035363,1.12950368523413,0.460325236507177,0,0.68741272937475,0.685082519770642,0,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,0.31136204275253,0,0.170733605754134,0.243106717068294,0.838452650511929,0.367687016900028,0.222246727801615,1.03017528619447,0.64183841918363,0.758091635291392,1.01391719956096,0.943131706930381,0.561849044819294,0.832326981263301,0.918967503289812,0.476293691283074,0.927074607558844,0.9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| ||
|short_description=p3@Epb4.1l4b | |||
}} | }} |
Latest revision as of 02:52, 27 September 2015
Short description: | p3@Epb4.1l4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Epb4.1l4b_5end |
Coexpression cluster: | NA |
Association with transcript: | -141bp_to_ENSMUST00000030142, ENSMUST00000095076_5end |
EntrezGene: | Epb4.1l4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.10e-08 | 9 |
epithelial cell of alimentary canal | 3.10e-08 | 9 |
columnar/cuboidal epithelial cell | 6.88e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.06e-17 | 31 |
gastrointestinal system | 2.73e-12 | 47 |
mucosa | 1.41e-11 | 15 |
intestinal mucosa | 7.49e-11 | 13 |
wall of intestine | 7.49e-11 | 13 |
gastrointestinal system mucosa | 7.49e-11 | 13 |
simple columnar epithelium | 4.46e-09 | 11 |
epithelium of mucosa | 3.10e-08 | 9 |
gastrointestinal system epithelium | 3.10e-08 | 9 |
intestinal epithelium | 3.10e-08 | 9 |
organ component layer | 4.16e-08 | 24 |
peripheral nervous system | 1.36e-07 | 11 |
endoderm-derived structure | 1.80e-07 | 118 |
endoderm | 1.80e-07 | 118 |
presumptive endoderm | 1.80e-07 | 118 |
digestive system | 7.64e-07 | 116 |
digestive tract | 7.64e-07 | 116 |
primitive gut | 7.64e-07 | 116 |