FFCP PHASE1:Mm9::chr18:23912209..23912220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212307 | |EntrezGene=212307 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1293 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R001 | |UniProt=Q8R001 | ||
|association_with_transcript=-5bp_to_ENSMUST00000115830,NM_001162941,uc008ege.2_5end | |association_with_transcript=-5bp_to_ENSMUST00000115830,NM_001162941,uc008ege.2_5end | ||
|cluster_id=chr18:23912209..23912220,+ | |||
|description=CAGE_peak_4_at_Mapre2_5end | |description=CAGE_peak_4_at_Mapre2_5end | ||
|id=chr18:23912209..23912220,+ | |id=chr18:23912209..23912220,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.25e-07!9;CL:0002251!3.25e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.25e-07!9;CL:0002251!3.25e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.13e-11,9;CL:0002251,2.13e-11,9;CL:0000239,7.91e-11,6;CL:0000677,7.91e-11,6;CL:0000584,7.91e-11,6;CL:0000075,3.74e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.51e-14!59;UBERON:0004923!1.27e-12!24;UBERON:0000344!6.37e-12!15;UBERON:0001242!3.25e-10!13;UBERON:0000060!3.25e-10!13;UBERON:0001262!3.25e-10!13;UBERON:0004786!3.25e-10!13;UBERON:0000160!1.78e-09!43;UBERON:0004119!7.04e-08!130;UBERON:0000925!7.04e-08!130;UBERON:0006595!7.04e-08!130;UBERON:0001007!1.50e-07!128;UBERON:0001555!1.50e-07!128;UBERON:0007026!1.50e-07!128;UBERON:0003350!3.25e-07!9;UBERON:0004808!3.25e-07!9;UBERON:0001277!3.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.40e-29,47;UBERON:0000160,5.68e-28,31;UBERON:0000344,1.77e-21,15;UBERON:0001242,8.26e-18,13;UBERON:0001262,8.26e-18,13;UBERON:0004786,8.26e-18,13;UBERON:0004923,3.80e-14,24;UBERON:0001007,1.40e-12,116;UBERON:0001555,1.40e-12,116;UBERON:0007026,1.40e-12,116;UBERON:0004119,3.30e-12,118;UBERON:0000925,3.30e-12,118;UBERON:0006595,3.30e-12,118;UBERON:0003350,2.13e-11,9;UBERON:0004808,2.13e-11,9;UBERON:0001277,2.13e-11,9;UBERON:0004921,8.31e-11,114;UBERON:0000485,4.77e-09,11;UBERON:0002108,8.90e-08,4;UBERON:0007023,8.86e-07,51 | |||
|phase1_expression=0,2.44282785347553,1.81999695755814,3.32710632437513,2.50447864973174,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,5.27974995218242,3.44113921600755,1.72269589234506,1.29228598847722,2.58565479223067,5.32065574477847,1.51218077855958,2.43903561720835,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0.209446706813455,3.0654846625031,0,0.599902730993408,0.254140454146129,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.497627882440372,2.52722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,2.55793501271625,0.771335564436891,0.930135779001631,0.536546802799238,1.86824547787471,1.6455984991348,0.985004784474571,0.729619285912702,1.02339991197733,0.439100230582101,0.536825675041487,0,0,2.64335026387038,1.32225283331772,0,0,0,0.80673409849337,0.444756087689741,0.951128130562796,1.42358718463353,1.15289268306808,1.50801125280162,1.79060824837036,2.72949721966768,2.69645822596266,1.29682829924817,3.18626037206988,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,1.32878813789265,0.159454768657487,0.81931657357869,0.172684981865896,0.578596234326046,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.661585194164886,1.97863503529776,1.29171541356724,1.20625849856312,0.954978752025092,0.656563598980245,1.7488850197791,0.556275906031529,0.341741761595705,0,0.185194527369712,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,9.54670618015114,0,0.203319467126849,0.972048067396211,1.46361807210128,1.52853794622324,1.48350781023303,1.32245529160537,2.09404753587224,2.07383957266869,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,2.0405734525369,0,0,0,0.19318959403219,0,0,2.35805216986972,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0.192906610981141,0.749431733813838,0.467863216890817,1.07435527024149,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,2.44282785347553,1.81999695755814,3.32710632437513,2.50447864973174,1.6787927191189,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,5.27974995218242,3.44113921600755,1.72269589234506,1.29228598847722,2.58565479223067,5.32065574477847,1.51218077855958,2.43903561720835,0,0,0,0.866554859253824,1.16364251750945,1.22501613757421,0.418531630736908,0,0,1.17646297606203,0.683045484958446,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,5.59175283654366,0,0.209446706813455,3.0654846625031,0,0.599902730993408,0.254140454146129,0.299581278809645,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.497627882440372,2.52722758433675,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0.414251545071004,0.703578179943289,0.36012412292203,0.473489471170421,2.55793501271625,0.771335564436891,0.930135779001631,0.536546802799238,1.86824547787471,1.6455984991348,0.985004784474571,0.729619285912702,1.02339991197733,0.439100230582101,0.536825675041487,0,0,2.64335026387038,1.32225283331772,0,0,0,0.80673409849337,0.444756087689741,0.951128130562796,1.42358718463353,1.15289268306808,1.50801125280162,1.79060824837036,2.72949721966768,2.69645822596266,1.29682829924817,3.18626037206988,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0.333690211432188,0,0.224862112384854,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.315270288212382,1.32878813789265,0.159454768657487,0.81931657357869,0.172684981865896,0.578596234326046,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.661585194164886,1.97863503529776,1.29171541356724,1.20625849856312,0.954978752025092,0.656563598980245,1.7488850197791,0.556275906031529,0.341741761595705,0,0.185194527369712,0.376736914009382,0.546776910884101,0.686334519619568,0,0,0,9.54670618015114,0,0.203319467126849,0.972048067396211,1.46361807210128,1.52853794622324,1.48350781023303,1.32245529160537,2.09404753587224,2.07383957266869,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,2.0405734525369,0,0,0,0.19318959403219,0,0,2.35805216986972,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.423073039458382,0.182927972872773,0,0.407412341537585,0,0,0.0985044823755635,0,0,0.192906610981141,0.749431733813838,0.467863216890817,1.07435527024149,0.191288332068843,0,0.463735671240843 | ||
|short_description=p4@Mapre2 | |short_description=p4@Mapre2 | ||
}} | }} |
Latest revision as of 02:42, 27 September 2015
Short description: | p4@Mapre2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mapre2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1293 |
Association with transcript: | -5bp_to_ENSMUST00000115830, NM_001162941, uc008ege.2_5end |
EntrezGene: | Mapre2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.13e-11 | 9 |
epithelial cell of alimentary canal | 2.13e-11 | 9 |
brush border epithelial cell | 7.91e-11 | 6 |
gut absorptive cell | 7.91e-11 | 6 |
enterocyte | 7.91e-11 | 6 |
columnar/cuboidal epithelial cell | 3.74e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.40e-29 | 47 |
intestine | 5.68e-28 | 31 |
mucosa | 1.77e-21 | 15 |
intestinal mucosa | 8.26e-18 | 13 |
wall of intestine | 8.26e-18 | 13 |
gastrointestinal system mucosa | 8.26e-18 | 13 |
organ component layer | 3.80e-14 | 24 |
digestive system | 1.40e-12 | 116 |
digestive tract | 1.40e-12 | 116 |
primitive gut | 1.40e-12 | 116 |
endoderm-derived structure | 3.30e-12 | 118 |
endoderm | 3.30e-12 | 118 |
presumptive endoderm | 3.30e-12 | 118 |
epithelium of mucosa | 2.13e-11 | 9 |
gastrointestinal system epithelium | 2.13e-11 | 9 |
intestinal epithelium | 2.13e-11 | 9 |
subdivision of digestive tract | 8.31e-11 | 114 |
simple columnar epithelium | 4.77e-09 | 11 |
small intestine | 8.90e-08 | 4 |
adult organism | 8.86e-07 | 51 |