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FFCP PHASE1:Mm9::chr18:21119857..21119882,+: Difference between revisions

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(Created page with "{{FFCP |id=chr18:21119857..21119882,+ |short_description=p3@Rnf125 |description=CAGE_peak_3_at_Rnf125_5end |association_with_transcript=-90bp_to_uc008efa.1_5end |EntrezGe...")
 
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{{FFCP
{{FFCP
|id=chr18:21119857..21119882,+
|DHSsupport=NA
|short_description=p3@Rnf125
|DPIdataset=NA
|description=CAGE_peak_3_at_Rnf125_5end
|association_with_transcript=-90bp_to_uc008efa.1_5end
|EntrezGene=67664
|EntrezGene=67664
|HGNC=
|HGNC=
|MCL_coexpression_id=120
|TSSclassifier=NA
|UniProt=Q9D9R0
|UniProt=Q9D9R0
|association_with_transcript=-90bp_to_uc008efa.1_5end
|cluster_id=chr18:21119857..21119882,+
|description=CAGE_peak_3_at_Rnf125_5end
|id=chr18:21119857..21119882,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,2.60e-09,25;CL:0002563,9.72e-09,9;CL:0002251,9.72e-09,9;CL:0000223,6.72e-08,20;CL:0000239,1.13e-07,6;CL:0000677,1.13e-07,6;CL:0000584,1.13e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.11e-13!130;UBERON:0000925!1.11e-13!130;UBERON:0006595!1.11e-13!130;UBERON:0001007!3.71e-13!128;UBERON:0001555!3.71e-13!128;UBERON:0007026!3.71e-13!128;UBERON:0004921!3.21e-12!126;UBERON:0004185!3.21e-12!126;UBERON:0003929!3.44e-11!55;UBERON:0005911!9.30e-11!69;UBERON:0000344!2.73e-09!15;UBERON:0009854!5.09e-09!23;UBERON:0009856!5.09e-09!23;UBERON:0002107!1.53e-08!22;UBERON:0007499!1.53e-08!22;UBERON:0006925!1.53e-08!22;UBERON:0009497!1.53e-08!22;UBERON:0000015!1.53e-08!22;UBERON:0002423!1.53e-08!22;UBERON:0006235!1.53e-08!22;UBERON:0008835!1.53e-08!22;UBERON:0003894!1.53e-08!22;UBERON:0004161!1.53e-08!22;UBERON:0008836!1.53e-08!22;UBERON:0001242!3.55e-08!13;UBERON:0000060!3.55e-08!13;UBERON:0001262!3.55e-08!13;UBERON:0004786!3.55e-08!13;UBERON:0000160!8.53e-08!43;UBERON:0002365!1.36e-07!25;UBERON:0002330!1.36e-07!25;UBERON:0000490!1.65e-07!66;UBERON:0004923!3.16e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.29e-21,31;UBERON:0004119,1.95e-14,118;UBERON:0000925,1.95e-14,118;UBERON:0006595,1.95e-14,118;UBERON:0001007,2.69e-14,116;UBERON:0001555,2.69e-14,116;UBERON:0007026,2.69e-14,116;UBERON:0000344,8.39e-14,15;UBERON:0005409,1.69e-13,47;UBERON:0004921,4.98e-13,114;UBERON:0001242,4.85e-12,13;UBERON:0001262,4.85e-12,13;UBERON:0004786,4.85e-12,13;UBERON:0009854,7.09e-12,23;UBERON:0009856,7.09e-12,23;UBERON:0002107,3.86e-11,22;UBERON:0007499,3.86e-11,22;UBERON:0006925,3.86e-11,22;UBERON:0009497,3.86e-11,22;UBERON:0000015,3.86e-11,22;UBERON:0002423,3.86e-11,22;UBERON:0006235,3.86e-11,22;UBERON:0008835,3.86e-11,22;UBERON:0003894,3.86e-11,22;UBERON:0004161,3.86e-11,22;UBERON:0008836,3.86e-11,22;UBERON:0003929,2.65e-10,55;UBERON:0002365,4.04e-09,25;UBERON:0002330,4.04e-09,25;UBERON:0004923,9.35e-09,24;UBERON:0003350,9.72e-09,9;UBERON:0004808,9.72e-09,9;UBERON:0001277,9.72e-09,9;UBERON:0000490,1.12e-07,66;UBERON:0005911,2.34e-07,69
|phase1_expression=0,78.8684421264956,76.4398722174421,35.3883127228991,29.0519523368881,21.1527882608981,25.2301651843168,2.7115897922731,4.36445038670167,2.34064526321993,0.513653904676515,0.0797721589953364,5.82082481766099,2.44777126773193,0.333109761815663,0.404950534779652,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,0.17008658030214,0,0,13.759348360233,14.9116032693661,57.997428375617,55.1375355083616,43.3097177698637,6.84084310042946,5.29263272495855,13.9690221712842,1.27006134691926,0,0,2.02196133825892,1.66234645358492,1.63335485009895,2.51118978442145,0.7813353445238,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0.436050312760893,0,0.58328969722285,0.419959264876088,0,0,15.2326049822382,20.8378155468328,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,13.4035362199736,20.782179029366,1.73918693221007,64.531790773604,45.5580793584193,29.1439723484421,40.9359142992032,57.7954684355563,4.63466586434781,0.681721290312231,0,1.06001872353102,0,0,0,0,0,0.253359865475099,0,22.836775943812,0.258937883647172,0,0,0.608930956624282,0,0.301445281105245,0.823120949949934,1.0053327306374,2.47194967734374,1.3013942122792,0,0.323533699894818,0.220841518460394,0,7.45567044872489,0,0,6.64188343542338,4.07371423320129,1.79970819298022,2.1601938602421,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0.505445516867349,73.4442077043794,0,0,0,0,0,0.12811372028485,0,9.8307280880826,0.215567992932842,0,0,0,0.278047249225598,0,0.61734640922383,0,0,2.05878325691772,2.84163499395593,0.207125772535502,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,1.07309360559848,0.350296027101508,0.329119699826961,0.492502392237286,1.05389452409612,0.730999937126662,0.878200461164203,1.07365135008297,0,0.102904612379284,46.2586296177317,11.3713743665324,0,0,1.03093969057675,2.8235693447268,1.33426826306922,2.85338439168839,5.69434873853414,5.92916237006439,10.0534083520108,9.54991065797524,7.40863531052657,6.29173586057955,9.29393614461185,15.1347367673319,0.189667900953082,0.228497025219458,0,0,0,0.210407459670956,0.0632365371242573,0,0.470996183524124,1.1105744752962,6.81841042300442,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0,1.78238096246994,2.5892652370573,34.5348033030825,12.0807021802756,4.31304619582064,21.2120340171047,10.6092808858951,38.1394105700139,46.6433275156972,137.49640358856,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0.780534591431195,0.472905432318573,0.8858587585951,0.478364305972461,0.491589944147214,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0.488660878060728,0.164970122972535,0,0,0,0,0,0,3.35956781118687,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,1.40803024838226,0.847328283455281,0.220528398054962,0.16488625294148,3.39075296061402,0.542816324353403,0.954978752025092,1.47726809770555,8.16146342563582,0,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.915112692826091,9.5187920796559,5.03825228365169,6.08079884739465,0,0,0.203319467126849,0.540026704109006,0.209088296014469,1.09181281873089,0.944050424693745,2.64491058321075,0.26175594198403,6.61036363788144,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0.632022241256357,0.608175645870493,0.718976700153791,0.51968329191118,0,0.39736270956253,0.360586348559907,0.590758108698309,0.706765149637033,0.914481679859998,0.705783295957884,0.487289403698762,0.288635524920988,1.16876902181569,0,0,0.0897138566094757,0.335769232728157,0.579568782096571,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.561849044819294,0.256100609619477,0.402048282689293,0,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.342869252385415,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.711810108745045,0.29551344712669,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,3.65280791882107,1.72159498861959,0.441182838239031,0.231867835620421
|phase1_expression=0,78.8684421264956,76.4398722174421,35.3883127228991,29.0519523368881,21.1527882608981,25.2301651843168,2.7115897922731,4.36445038670167,2.34064526321993,0.513653904676515,0.0797721589953364,5.82082481766099,2.44777126773193,0.333109761815663,0.404950534779652,1.39912375625629,0.157731082679119,0.274228867211478,0.84877930359606,0.17008658030214,0,0,13.759348360233,14.9116032693661,57.997428375617,55.1375355083616,43.3097177698637,6.84084310042946,5.29263272495855,13.9690221712842,1.27006134691926,0,0,2.02196133825892,1.66234645358492,1.63335485009895,2.51118978442145,0.7813353445238,0,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0.436050312760893,0,0.58328969722285,0.419959264876088,0,0,15.2326049822382,20.8378155468328,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0.372798891650601,13.4035362199736,20.782179029366,1.73918693221007,64.531790773604,45.5580793584193,29.1439723484421,40.9359142992032,57.7954684355563,4.63466586434781,0.681721290312231,0,1.06001872353102,0,0,0,0,0,0.253359865475099,0,22.836775943812,0.258937883647172,0,0,0.608930956624282,0,0.301445281105245,0.823120949949934,1.0053327306374,2.47194967734374,1.3013942122792,0,0.323533699894818,0.220841518460394,0,7.45567044872489,0,0,6.64188343542338,4.07371423320129,1.79970819298022,2.1601938602421,0,0,0,0,0,0.20778804455956,0,0,0.622034853050465,0.505445516867349,73.4442077043794,0,0,0,0,0,0.12811372028485,0,9.8307280880826,0.215567992932842,0,0,0,0.278047249225598,0,0.61734640922383,0,0,2.05878325691772,2.84163499395593,0.207125772535502,0.703578179943289,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,1.07309360559848,0.350296027101508,0.329119699826961,0.492502392237286,1.05389452409612,0.730999937126662,0.878200461164203,1.07365135008297,0,0.102904612379284,46.2586296177317,11.3713743665324,0,0,1.03093969057675,2.8235693447268,1.33426826306922,2.85338439168839,5.69434873853414,5.92916237006439,10.0534083520108,9.54991065797524,7.40863531052657,6.29173586057955,9.29393614461185,15.1347367673319,0.189667900953082,0.228497025219458,0,0,0,0.210407459670956,0.0632365371242573,0,0.470996183524124,1.1105744752962,6.81841042300442,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0,1.78238096246994,2.5892652370573,34.5348033030825,12.0807021802756,4.31304619582064,21.2120340171047,10.6092808858951,38.1394105700139,46.6433275156972,137.49640358856,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0,0.335012514883631,0.238043640886014,0.780534591431195,0.472905432318573,0.8858587585951,0.478364305972461,0.491589944147214,1.03610989119537,0.723245292907558,0,0,0.491764273019036,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0,0.488660878060728,0.164970122972535,0,0,0,0,0,0,3.35956781118687,0,0.356497378384721,0.632073515871632,2.10837217149998,0,0,0,0,0,0.177340233642274,0,0,0.608929898229199,1.40803024838226,0.847328283455281,0.220528398054962,0.16488625294148,3.39075296061402,0.542816324353403,0.954978752025092,1.47726809770555,8.16146342563582,0,0.170870880797853,0.619160603889667,0,0.188368457004691,0,0.915112692826091,9.5187920796559,5.03825228365169,6.08079884739465,0,0,0.203319467126849,0.540026704109006,0.209088296014469,1.09181281873089,0.944050424693745,2.64491058321075,0.26175594198403,6.61036363788144,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0.576060012515731,0.632022241256357,0.608175645870493,0.718976700153791,0.51968329191118,0,0.39736270956253,0.360586348559907,0.590758108698309,0.706765149637033,0.914481679859998,0.705783295957884,0.487289403698762,0.288635524920988,1.16876902181569,0,0,0.0897138566094757,0.335769232728157,0.579568782096571,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0.170733605754134,0,0,0.735374033800057,0.222246727801615,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,0.561849044819294,0.256100609619477,0.402048282689293,0,0.811190281613988,0.77163688185482,0.412085900803307,1.17759136107518,0.342869252385415,0.354951612318675,0.953744759789284,0.726732083161643,0.564656282491984,0.507687647350059,0.548783918618318,0.263069711437843,0.407412341537585,1.12228454331548,0.711810108745045,0.29551344712669,0,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,3.65280791882107,1.72159498861959,0.441182838239031,0.231867835620421
|short_description=p3@Rnf125
}}
}}

Latest revision as of 02:23, 27 September 2015

Short description:p3@Rnf125
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf125_5end
Coexpression cluster:MCL_coexpression_mm9:120
Association with transcript: -90bp_to_uc008efa.1_5end
EntrezGene:Rnf125
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf125

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I578.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I676.44
CD326+ enterocyte, pool1.CNhs13542.11848-124I335.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I429.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.91
GP2+ M cell, pool1.CNhs13228.11845-124H958.00
GP2+ M cell, pool2.CNhs13231.11846-124I155.14
GP2+ M cell, pool3.CNhs13240.11847-124I243.31
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D913.40
Mouse Schwann, donor2.CNhs12573.11746-123F920.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F764.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C445.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.14
Mouse hepatocyte, donor6.CNhs13090.11822-124F440.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F657.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.84
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G473.44
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I346.26
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E39.29
intestine, neonate N30.CNhs11131.1384-42G115.13
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F434.53
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A338.14
liver, neonate N25.CNhs11198.1368-26H146.64
liver, neonate N30.CNhs11106.1382-42D1137.50
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.08
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I16.61
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.60e-0925
intestinal epithelial cell9.72e-099
epithelial cell of alimentary canal9.72e-099
endodermal cell6.72e-0820
brush border epithelial cell1.13e-076
gut absorptive cell1.13e-076
enterocyte1.13e-076

Uber anatomy
Ontology termp-valuen
intestine4.29e-2131
endoderm-derived structure1.95e-14118
endoderm1.95e-14118
presumptive endoderm1.95e-14118
digestive system2.69e-14116
digestive tract2.69e-14116
primitive gut2.69e-14116
mucosa8.39e-1415
gastrointestinal system1.69e-1347
subdivision of digestive tract4.98e-13114
intestinal mucosa4.85e-1213
wall of intestine4.85e-1213
gastrointestinal system mucosa4.85e-1213
digestive tract diverticulum7.09e-1223
sac7.09e-1223
liver3.86e-1122
epithelial sac3.86e-1122
digestive gland3.86e-1122
epithelium of foregut-midgut junction3.86e-1122
anatomical boundary3.86e-1122
hepatobiliary system3.86e-1122
foregut-midgut junction3.86e-1122
hepatic diverticulum3.86e-1122
liver primordium3.86e-1122
septum transversum3.86e-1122
liver bud3.86e-1122
gut epithelium2.65e-1055
exocrine gland4.04e-0925
exocrine system4.04e-0925
organ component layer9.35e-0924
epithelium of mucosa9.72e-099
gastrointestinal system epithelium9.72e-099
intestinal epithelium9.72e-099
unilaminar epithelium1.12e-0766
endo-epithelium2.34e-0769
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