FFCP PHASE1:Mm9::chr1:33964526..33964536,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320705 | |EntrezGene=320705 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=464 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PFX2 | |UniProt=Q6PFX2 | ||
|association_with_transcript=-60bp_to_NM_177235,uc007aoc.1,uc007aod.1,uc011wiz.1_5end | |association_with_transcript=-60bp_to_NM_177235,uc007aoc.1,uc007aod.1,uc011wiz.1_5end | ||
|cluster_id=chr1:33964526..33964536,- | |||
|description=CAGE_peak_5_at_Bend6_5end | |description=CAGE_peak_5_at_Bend6_5end | ||
|id=chr1:33964526..33964536,- | |id=chr1:33964526..33964536,- | ||
|ontology_enrichment_celltype=CL:0000117!8.97e-21!23;CL:0000337!8.97e-21!23;CL:0000540!5.90e-14!33;CL:0000047!5.90e-14!33;CL:0000031!5.90e-14!33;CL:0000404!5.90e-14!33;CL:0002319!3.30e-11!43;CL:0000393!7.77e-11!39;CL:0000211!7.77e-11!39;CL:0000221!8.42e-11!44;CL:0000133!8.42e-11!44;CL:0000055!1.00e-08!50 | |ontology_enrichment_celltype=CL:0000117!8.97e-21!23;CL:0000337!8.97e-21!23;CL:0000540!5.90e-14!33;CL:0000047!5.90e-14!33;CL:0000031!5.90e-14!33;CL:0000404!5.90e-14!33;CL:0002319!3.30e-11!43;CL:0000393!7.77e-11!39;CL:0000211!7.77e-11!39;CL:0000221!8.42e-11!44;CL:0000133!8.42e-11!44;CL:0000055!1.00e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.80e-19,23;CL:0000337,5.80e-19,23;CL:0000540,1.20e-12,33;CL:0000047,1.20e-12,33;CL:0000031,1.20e-12,33;CL:0000404,1.20e-12,33;CL:0002612,1.93e-12,3;CL:0002610,2.53e-12,3;CL:0002614,3.02e-12,3;CL:0000393,2.06e-10,39;CL:0000211,2.06e-10,39;CL:0002611,2.64e-09,2;CL:0002319,2.87e-09,43;CL:0000221,5.15e-09,44;CL:0000133,5.15e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.62e-29!52;UBERON:0005068!3.62e-29!52;UBERON:0006241!3.62e-29!52;UBERON:0007135!3.62e-29!52;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0001017!3.13e-26!73;UBERON:0005743!3.13e-26!73;UBERON:0002020!9.74e-26!34;UBERON:0002616!4.02e-25!49;UBERON:0000955!2.10e-24!50;UBERON:0006238!2.10e-24!50;UBERON:0002346!2.40e-24!71;UBERON:0003075!2.40e-24!71;UBERON:0007284!2.40e-24!71;UBERON:0000033!4.16e-22!63;UBERON:0004121!7.51e-21!102;UBERON:0000924!7.51e-21!102;UBERON:0006601!7.51e-21!102;UBERON:0002791!3.89e-19!29;UBERON:0003528!3.89e-19!29;UBERON:0001893!3.89e-19!29;UBERON:0003056!3.97e-18!49;UBERON:0003080!4.11e-18!40;UBERON:0002780!6.20e-17!39;UBERON:0001890!6.20e-17!39;UBERON:0006240!6.20e-17!39;UBERON:0007811!2.76e-14!86;UBERON:0003076!3.95e-12!12;UBERON:0003057!3.95e-12!12;UBERON:0000153!4.04e-12!94;UBERON:0000956!7.50e-11!21;UBERON:0001869!7.50e-11!21;UBERON:0000203!7.50e-11!21;UBERON:0002420!2.79e-10!8;UBERON:0007245!2.79e-10!8;UBERON:0010009!2.79e-10!8;UBERON:0010011!2.79e-10!8;UBERON:0000454!2.79e-10!8;UBERON:0002240!8.18e-10!6;UBERON:0005174!8.18e-10!6;UBERON:0001137!8.18e-10!6;UBERON:0002298!1.14e-09!6;UBERON:0002619!9.27e-09!17;UBERON:0001948!2.34e-08!5;UBERON:0002315!2.34e-08!5;UBERON:0000025!6.09e-08!114;UBERON:0002950!7.41e-07!4;UBERON:0001891!7.41e-07!4;UBERON:0009616!7.41e-07!4;UBERON:0004111!9.05e-07!122 | |ontology_enrichment_uberon=UBERON:0001049!3.62e-29!52;UBERON:0005068!3.62e-29!52;UBERON:0006241!3.62e-29!52;UBERON:0007135!3.62e-29!52;UBERON:0000073!2.15e-26!75;UBERON:0001016!2.15e-26!75;UBERON:0001017!3.13e-26!73;UBERON:0005743!3.13e-26!73;UBERON:0002020!9.74e-26!34;UBERON:0002616!4.02e-25!49;UBERON:0000955!2.10e-24!50;UBERON:0006238!2.10e-24!50;UBERON:0002346!2.40e-24!71;UBERON:0003075!2.40e-24!71;UBERON:0007284!2.40e-24!71;UBERON:0000033!4.16e-22!63;UBERON:0004121!7.51e-21!102;UBERON:0000924!7.51e-21!102;UBERON:0006601!7.51e-21!102;UBERON:0002791!3.89e-19!29;UBERON:0003528!3.89e-19!29;UBERON:0001893!3.89e-19!29;UBERON:0003056!3.97e-18!49;UBERON:0003080!4.11e-18!40;UBERON:0002780!6.20e-17!39;UBERON:0001890!6.20e-17!39;UBERON:0006240!6.20e-17!39;UBERON:0007811!2.76e-14!86;UBERON:0003076!3.95e-12!12;UBERON:0003057!3.95e-12!12;UBERON:0000153!4.04e-12!94;UBERON:0000956!7.50e-11!21;UBERON:0001869!7.50e-11!21;UBERON:0000203!7.50e-11!21;UBERON:0002420!2.79e-10!8;UBERON:0007245!2.79e-10!8;UBERON:0010009!2.79e-10!8;UBERON:0010011!2.79e-10!8;UBERON:0000454!2.79e-10!8;UBERON:0002240!8.18e-10!6;UBERON:0005174!8.18e-10!6;UBERON:0001137!8.18e-10!6;UBERON:0002298!1.14e-09!6;UBERON:0002619!9.27e-09!17;UBERON:0001948!2.34e-08!5;UBERON:0002315!2.34e-08!5;UBERON:0000025!6.09e-08!114;UBERON:0002950!7.41e-07!4;UBERON:0001891!7.41e-07!4;UBERON:0009616!7.41e-07!4;UBERON:0004111!9.05e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,5.24e-32,12;UBERON:0003057,5.24e-32,12;UBERON:0000073,1.24e-28,54;UBERON:0001049,3.94e-24,52;UBERON:0005068,3.94e-24,52;UBERON:0006241,3.94e-24,52;UBERON:0007135,3.94e-24,52;UBERON:0002240,4.68e-24,6;UBERON:0005174,4.68e-24,6;UBERON:0001137,4.68e-24,6;UBERON:0001017,1.06e-22,73;UBERON:0001016,5.26e-22,75;UBERON:0001948,4.40e-20,5;UBERON:0002315,4.40e-20,5;UBERON:0002346,5.33e-19,64;UBERON:0003075,5.33e-19,64;UBERON:0007284,5.33e-19,64;UBERON:0004121,1.22e-16,95;UBERON:0000924,1.22e-16,95;UBERON:0006601,1.22e-16,95;UBERON:0010371,2.98e-16,73;UBERON:0002950,5.26e-16,4;UBERON:0001891,5.26e-16,4;UBERON:0009616,5.26e-16,4;UBERON:0010286,5.26e-16,4;UBERON:0002257,1.93e-12,3;UBERON:0004684,2.53e-12,3;UBERON:0002275,2.53e-12,3;UBERON:0002038,3.02e-12,3;UBERON:0009663,3.02e-12,3;UBERON:0009661,3.02e-12,3;UBERON:0000125,3.02e-12,3;UBERON:0002308,3.02e-12,3;UBERON:0010314,3.29e-12,92;UBERON:0002020,5.09e-12,34;UBERON:0002616,6.40e-12,46;UBERON:0000955,1.28e-11,47;UBERON:0006238,1.28e-11,47;UBERON:0004733,8.46e-11,6;UBERON:0004732,8.46e-11,6;UBERON:0002028,8.46e-11,6;UBERON:0007277,8.46e-11,6;UBERON:0001896,2.64e-09,2;UBERON:0002256,2.64e-09,2;UBERON:0002298,2.64e-09,2;UBERON:0005290,2.64e-09,2;UBERON:0010096,2.64e-09,2;UBERON:0000025,3.37e-09,114;UBERON:0004111,2.27e-08,122;UBERON:0011216,3.78e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0.630974884054146,5.14171771926846,2.65042249141936,0.367472397644862,0.0958454710182364,0,3.30347642998166,1.78762273319263,1.68967186581868,0.263772575460388,0.457438218012048,0.52091337055676,3.35019598801657,2.25105044012672,1.06958773443767,2.65165726926301,4.27115042397309,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,2.99581278809645,0.457500602818626,0.502617408451458,0.695297280769106,0.255715457330331,1.66230435647648,2.10913641988085,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.33486592967038,2.81308047821288,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0.952587382566147,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0,0.630974884054146,5.14171771926846,2.65042249141936,0.367472397644862,0.0958454710182364,0,3.30347642998166,1.78762273319263,1.68967186581868,0.263772575460388,0.457438218012048,0.52091337055676,3.35019598801657,2.25105044012672,1.06958773443767,2.65165726926301,4.27115042397309,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,2.99581278809645,0.457500602818626,0.502617408451458,0.695297280769106,0.255715457330331,1.66230435647648,2.10913641988085,0,0,0,0,0.130120442962704,0,0,0,0.136072998302656,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,4.33486592967038,2.81308047821288,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,0.572895513439397,1.03111909406213,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0,0.952587382566147,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.429742108096597,0,0,0 | ||
|short_description=p5@Bend6 | |short_description=p5@Bend6 | ||
}} | }} |
Latest revision as of 01:45, 27 September 2015
Short description: | p5@Bend6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Bend6_5end |
Coexpression cluster: | MCL_coexpression_mm9:464 |
Association with transcript: | -60bp_to_NM_177235, uc007aoc.1, uc007aod.1, uc011wiz.1_5end |
EntrezGene: | Bend6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.80e-19 | 23 |
neuroblast (sensu Vertebrata) | 5.80e-19 | 23 |
neuron | 1.20e-12 | 33 |
neuronal stem cell | 1.20e-12 | 33 |
neuroblast | 1.20e-12 | 33 |
electrically signaling cell | 1.20e-12 | 33 |
neuron of the ventral spinal cord | 1.93e-12 | 3 |
raphe nuclei neuron | 2.53e-12 | 3 |
neuron of the substantia nigra | 3.02e-12 | 3 |
electrically responsive cell | 2.06e-10 | 39 |
electrically active cell | 2.06e-10 | 39 |
neuron of the dorsal spinal cord | 2.64e-09 | 2 |
neural cell | 2.87e-09 | 43 |
ectodermal cell | 5.15e-09 | 44 |
neurectodermal cell | 5.15e-09 | 44 |