FFCP PHASE1:Mm9::chr6:29803983..29803998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74340 | |EntrezGene=74340 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=29 | |MCL_coexpression_id=29 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=92bp_to_ENSMUST00000135396,uc009bej.1_5end | |association_with_transcript=92bp_to_ENSMUST00000135396,uc009bej.1_5end | ||
|cluster_id=chr6:29803983..29803998,+ | |||
|description=CAGE_peak_5_at_Ahcyl2_5end | |description=CAGE_peak_5_at_Ahcyl2_5end | ||
|id=chr6:29803983..29803998,+ | |id=chr6:29803983..29803998,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.41e-08!9;CL:0002251!1.41e-08!9;CL:0000239!4.05e-07!6;CL:0000677!4.05e-07!6;CL:0000212!4.05e-07!6;CL:0000584!4.05e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.41e-08!9;CL:0002251!1.41e-08!9;CL:0000239!4.05e-07!6;CL:0000677!4.05e-07!6;CL:0000212!4.05e-07!6;CL:0000584!4.05e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.52e-16,6;CL:0000677,4.52e-16,6;CL:0000584,4.52e-16,6;CL:0000075,1.12e-13,7;CL:0002563,1.77e-10,9;CL:0002251,1.77e-10,9;CL:0000682,1.51e-08,3;CL:0000066,3.16e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.35e-16!43;UBERON:0005409!1.31e-14!59;UBERON:0000344!1.06e-13!15;UBERON:0004119!2.15e-12!130;UBERON:0000925!2.15e-12!130;UBERON:0006595!2.15e-12!130;UBERON:0001007!3.92e-12!128;UBERON:0001555!3.92e-12!128;UBERON:0007026!3.92e-12!128;UBERON:0001242!5.69e-12!13;UBERON:0000060!5.69e-12!13;UBERON:0001262!5.69e-12!13;UBERON:0004786!5.69e-12!13;UBERON:0004923!3.44e-11!24;UBERON:0004921!5.38e-11!126;UBERON:0004185!5.38e-11!126;UBERON:0003350!1.41e-08!9;UBERON:0004808!1.41e-08!9;UBERON:0001277!1.41e-08!9 | |ontology_enrichment_uberon=UBERON:0000160!8.35e-16!43;UBERON:0005409!1.31e-14!59;UBERON:0000344!1.06e-13!15;UBERON:0004119!2.15e-12!130;UBERON:0000925!2.15e-12!130;UBERON:0006595!2.15e-12!130;UBERON:0001007!3.92e-12!128;UBERON:0001555!3.92e-12!128;UBERON:0007026!3.92e-12!128;UBERON:0001242!5.69e-12!13;UBERON:0000060!5.69e-12!13;UBERON:0001262!5.69e-12!13;UBERON:0004786!5.69e-12!13;UBERON:0004923!3.44e-11!24;UBERON:0004921!5.38e-11!126;UBERON:0004185!5.38e-11!126;UBERON:0003350!1.41e-08!9;UBERON:0004808!1.41e-08!9;UBERON:0001277!1.41e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.01e-34,31;UBERON:0005409,1.95e-25,47;UBERON:0000344,1.08e-19,15;UBERON:0001242,1.47e-15,13;UBERON:0001262,1.47e-15,13;UBERON:0004786,1.47e-15,13;UBERON:0004923,1.51e-13,24;UBERON:0003350,1.77e-10,9;UBERON:0004808,1.77e-10,9;UBERON:0001277,1.77e-10,9;UBERON:0001007,5.52e-10,116;UBERON:0001555,5.52e-10,116;UBERON:0007026,5.52e-10,116;UBERON:0004119,1.02e-09,118;UBERON:0000925,1.02e-09,118;UBERON:0006595,1.02e-09,118;UBERON:0000485,1.93e-08,11;UBERON:0004921,2.79e-08,114 | |||
|phase1_expression=0,4.88565570695105,4.54999239389536,9.37639055051173,6.01074875935617,2.18243053485457,2.80335168714631,36.4127772105245,0.563154888606667,0,0,0.159544317990673,0.684802919724823,0.262261207256992,0,0,0,0.630924330716475,0.548457734422955,0,0,0.297872853602656,1.56719873483361,2.71987118748791,2.75291137280604,5.7423196411502,1.7230479846363,4.09395342103189,3.80046838912748,1.76421090831952,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.681535739998656,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0.173485326766136,0,0,0,0,0,1.23597483867187,0.144599356919912,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,21.1468021109631,8.19796756656987,0,0,0.257734922644187,2.8235693447268,2.66853652613844,5.32631753115166,5.21981967698963,3.62337700392824,1.25667604400135,0.795825888164603,0.58489226135736,5.39291645192533,4.53889904736858,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.704015124191131,0,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0.341741761595705,0,0,0,0.410082683163076,0,0,0,0,0,0,0,0.324016022465404,0,1.74690050996942,0.404593039154462,0,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.01362607645082,0.821687657318618,0,0,0,0.841368146639782,0.295379054349154,0.302899349844443,0.304827226619999,0.504130925684203,0.779663045918019,0.481059208201647,0.584384510907845,0,0,0,0,0.19318959403219,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,4.88565570695105,4.54999239389536,9.37639055051173,6.01074875935617,2.18243053485457,2.80335168714631,36.4127772105245,0.563154888606667,0,0,0.159544317990673,0.684802919724823,0.262261207256992,0,0,0,0.630924330716475,0.548457734422955,0,0,0.297872853602656,1.56719873483361,2.71987118748791,2.75291137280604,5.7423196411502,1.7230479846363,4.09395342103189,3.80046838912748,1.76421090831952,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0.681535739998656,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0.258937883647172,0,0.173485326766136,0,0,0,0,0,1.23597483867187,0.144599356919912,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,21.1468021109631,8.19796756656987,0,0,0.257734922644187,2.8235693447268,2.66853652613844,5.32631753115166,5.21981967698963,3.62337700392824,1.25667604400135,0.795825888164603,0.58489226135736,5.39291645192533,4.53889904736858,7.36822711041159,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0,0.18006109403131,0,0,0,0,0,0.304464949114599,0.704015124191131,0,0,0.16488625294148,0,0,0,0,3.78925087618806,0,0.341741761595705,0,0,0,0.410082683163076,0,0,0,0,0,0,0,0.324016022465404,0,1.74690050996942,0.404593039154462,0,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,1.01362607645082,0.821687657318618,0,0,0,0.841368146639782,0.295379054349154,0.302899349844443,0.304827226619999,0.504130925684203,0.779663045918019,0.481059208201647,0.584384510907845,0,0,0,0,0.19318959403219,0,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.229741875822453,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0.145346416632329,0.282328141245992,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0.429742108096597,0,0,0 | ||
|short_description=p5@Ahcyl2 | |short_description=p5@Ahcyl2 | ||
}} | }} |
Latest revision as of 01:05, 27 September 2015
Short description: | p5@Ahcyl2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ahcyl2_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | 92bp_to_ENSMUST00000135396, uc009bej.1_5end |
EntrezGene: | Ahcyl2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.52e-16 | 6 |
gut absorptive cell | 4.52e-16 | 6 |
enterocyte | 4.52e-16 | 6 |
columnar/cuboidal epithelial cell | 1.12e-13 | 7 |
intestinal epithelial cell | 1.77e-10 | 9 |
epithelial cell of alimentary canal | 1.77e-10 | 9 |
M cell of gut | 1.51e-08 | 3 |
epithelial cell | 3.16e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.01e-34 | 31 |
gastrointestinal system | 1.95e-25 | 47 |
mucosa | 1.08e-19 | 15 |
intestinal mucosa | 1.47e-15 | 13 |
wall of intestine | 1.47e-15 | 13 |
gastrointestinal system mucosa | 1.47e-15 | 13 |
organ component layer | 1.51e-13 | 24 |
epithelium of mucosa | 1.77e-10 | 9 |
gastrointestinal system epithelium | 1.77e-10 | 9 |
intestinal epithelium | 1.77e-10 | 9 |
digestive system | 5.52e-10 | 116 |
digestive tract | 5.52e-10 | 116 |
primitive gut | 5.52e-10 | 116 |
endoderm-derived structure | 1.02e-09 | 118 |
endoderm | 1.02e-09 | 118 |
presumptive endoderm | 1.02e-09 | 118 |
simple columnar epithelium | 1.93e-08 | 11 |
subdivision of digestive tract | 2.79e-08 | 114 |