FFCP PHASE1:Mm9::chr13:101222804..101222815,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:101222804..101222815,-
|short_description=p1@Naip1
|description=CAGE_peak_1_at_Naip1_5end
|association_with_transcript=3bp_to_NM_008670,uc007rqs.1,uc011zd...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17940 | |EntrezGene=17940 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=604 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QWK5 | |UniProt=Q9QWK5 | ||
|association_with_transcript=3bp_to_NM_008670,uc007rqs.1,uc011zdw.1_5end | |||
|cluster_id=chr13:101222804..101222815,- | |||
|description=CAGE_peak_1_at_Naip1_5end | |||
|id=chr13:101222804..101222815,- | |||
|ontology_enrichment_celltype=CL:0002563!7.79e-12!9;CL:0002251!7.79e-12!9;CL:0000239!5.16e-11!6;CL:0000677!5.16e-11!6;CL:0000212!5.16e-11!6;CL:0000584!5.16e-11!6;CL:0000075!2.59e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.94e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.34e-28!43;UBERON:0005409!1.62e-23!59;UBERON:0000344!3.69e-22!15;UBERON:0001242!1.07e-18!13;UBERON:0000060!1.07e-18!13;UBERON:0001262!1.07e-18!13;UBERON:0004786!1.07e-18!13;UBERON:0004923!1.86e-12!24;UBERON:0003350!7.79e-12!9;UBERON:0004808!7.79e-12!9;UBERON:0001277!7.79e-12!9;UBERON:0000485!2.11e-09!11;UBERON:0001007!4.63e-08!128;UBERON:0001555!4.63e-08!128;UBERON:0007026!4.63e-08!128;UBERON:0004119!8.21e-08!130;UBERON:0000925!8.21e-08!130;UBERON:0006595!8.21e-08!130;UBERON:0000331!4.14e-07!3;UBERON:0002116!4.14e-07!3;UBERON:0001204!4.14e-07!3;UBERON:0001168!4.14e-07!3;UBERON:0004921!9.23e-07!126;UBERON:0004185!9.23e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.04e-29,31;UBERON:0005409,5.64e-21,47;UBERON:0002108,3.98e-18,4;UBERON:0000331,4.91e-14,3;UBERON:0002116,4.91e-14,3;UBERON:0001204,4.91e-14,3;UBERON:0001168,4.91e-14,3;UBERON:0000344,1.02e-13,15;UBERON:0001962,2.42e-09,2;UBERON:0001961,2.42e-09,2;UBERON:0001744,2.42e-09,2;UBERON:0001007,3.57e-09,116;UBERON:0001555,3.57e-09,116;UBERON:0007026,3.57e-09,116;UBERON:0004119,5.75e-09,118;UBERON:0000925,5.75e-09,118;UBERON:0006595,5.75e-09,118;UBERON:0001242,1.53e-08,13;UBERON:0001262,1.53e-08,13;UBERON:0004786,1.53e-08,13;UBERON:0004923,2.87e-08,24;UBERON:0004921,4.88e-07,114 | |||
|phase1_expression=0,4.18770489167233,0.909998478779072,2.72217790176147,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,3.99049180858385,2.26827116783938,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,0.128867461322093,0.80673409849337,1.11189021922435,1.71203063501303,1.42358718463353,3.12928013975621,1.50801125280162,3.18330355265841,3.11942539390592,1.79763881730844,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.0826534557253359,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.192075457214608,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,0.909998478779072,2.72217790176147,0.500895729946347,0.839396359559449,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,1.14846392823004,1.29228598847722,1.72376986148711,3.99049180858385,2.26827116783938,2.21730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,1.05780226665418,0,0,0.128867461322093,0.80673409849337,1.11189021922435,1.71203063501303,1.42358718463353,3.12928013975621,1.50801125280162,3.18330355265841,3.11942539390592,1.79763881730844,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0.0826534557253359,0,2.20345454596048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.280924522409647,0.192075457214608,0.34461281373368,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Naip1 | |||
}} | }} |
Latest revision as of 01:05, 27 September 2015
Short description: | p1@Naip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Naip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:604 |
Association with transcript: | 3bp_to_NM_008670, uc007rqs.1, uc011zdw.1_5end |
EntrezGene: | Naip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.94e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.04e-29 | 31 |
gastrointestinal system | 5.64e-21 | 47 |
small intestine | 3.98e-18 | 4 |
ileal mucosa | 4.91e-14 | 3 |
ileum | 4.91e-14 | 3 |
mucosa of small intestine | 4.91e-14 | 3 |
wall of small intestine | 4.91e-14 | 3 |
mucosa | 1.02e-13 | 15 |
gut-associated lymphoid tissue | 2.42e-09 | 2 |
mucosa-associated lymphoid tissue | 2.42e-09 | 2 |
lymphoid tissue | 2.42e-09 | 2 |
digestive system | 3.57e-09 | 116 |
digestive tract | 3.57e-09 | 116 |
primitive gut | 3.57e-09 | 116 |
endoderm-derived structure | 5.75e-09 | 118 |
endoderm | 5.75e-09 | 118 |
presumptive endoderm | 5.75e-09 | 118 |
intestinal mucosa | 1.53e-08 | 13 |
wall of intestine | 1.53e-08 | 13 |
gastrointestinal system mucosa | 1.53e-08 | 13 |
organ component layer | 2.87e-08 | 24 |
subdivision of digestive tract | 4.88e-07 | 114 |