FFCP PHASE1:Mm9::chr15:76369307..76369333,+: Difference between revisions
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{{FFCP|EntrezGene=52710|HGNC=|UniProt=Q9D8F3|association_with_transcript=-39bp_to_ENSMUST00000023220,NM_029643,uc007wkt.1,uc007wku.1_5end|description=CAGE_peak_4_at_Gpr172b_5end|id=chr15:76369307..76369333,+|ontology_enrichment_celltype=CL:0000548!4.45e-09!115;CL:0000004!4.45e-09!115;CL:0000255!4.45e-09!115;CL:0000063!2.53e-08!66;CL:0002371!4.10e-08!118;CL:0000144!5.46e-08!121;CL:0000012!5.46e-08!121;CL:0002031!1.82e-07!25;CL:0000219!6.57e-07!54|ontology_enrichment_celltype_v019_2=CL:0002031,1.66e-08,25;CL:0000988,2.65e-07,32;CL:0002032,2.65e-07,32;CL:0000037,2.65e-07,32;CL:0000837,2.65e-07,32;CL:0000219,3.90e-07,54;CL:0002320,6.16e-07,46;CL:0000134,6.16e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.90e-09!43;UBERON:0000344!4.31e-09!15;UBERON:0001242!6.90e-08!13;UBERON:0000060!6.90e-08!13;UBERON:0001262!6.90e-08!13;UBERON:0004786!6.90e-08!13;UBERON:0005409!1.68e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.82e-14,31;UBERON:0000344,5.99e-10,15;UBERON:0005409,4.79e-09,47;UBERON:0001242,1.31e-08,13;UBERON:0001262,1.31e-08,13;UBERON:0004786,1.31e-08,13;UBERON:0002384,6.16e-07,46;UBERON:0004923,7.16e-07,24|phase1_expression=0.480446541314382,7.67745896806594,6.3699893514535,3.62957053568196,7.01254021924886,3.86122325397347,2.10251376535973,2.1950964985068,2.25261955442667,1.40438715793196,7.36237263369671,6.78063351460359,3.42401459862411,3.58423649917889,1.99865857089398,1.21485160433896,2.09868563438444,1.73504190947031,2.19383093769182,2.12194825899015,1.53077922271926,1.19149141441062,2.87319768052829,5.91971964335605,4.12936705920906,8.03924749761028,5.1691439539089,5.38678081714723,7.41091335879858,4.03248207615889,4.43461021310609,2.54012269383853,2.46025915033828,0,4.04392267651784,2.32728503501889,1.22501613757421,0.837063261473815,0,0.523523743973798,1.17646297606203,2.04913645487534,0.485510353031154,0.377690453926732,0.304130793658544,0.367093504323363,2.34717403304412,1.74420125104357,0.878744730937887,1.55543919259427,0.979904951377538,2.87505128729943,2.51673909086605,2.90144856804538,3.6970317905671,1.28629718017973,0.573066879877513,1.03134418455488,1.61853168687678,0.528990979272033,1.26766280701236,0.677689064138264,0.889294796111139,3.5995988691256,7.9109309005358,4.9733608046227,0.599200221036809,2.30530983192933,1.45165457231869,0.945041568321835,1.68259969081106,3.14216082844184,1.54607978666129,0.857435594504678,1.15014565221884,1.83843757322004,1.10115880999389,1.40456071893706,1.22885226604995,1.71452174049252,1.46380229763855,1.56274011167028,0.837548997004143,1.12552522006336,1.06958773443767,1.17851434189467,1.85083185038834,2.79599168737951,2.19605960666234,0.982430281388212,0.579728977403356,1.72084775396277,0,1.07940638327563,0,2.24013443548668,0.702222100658759,1.1930122580464,1.81850203222008,1.06001872353102,0.704217098883403,0,0,0,2.16491041011214,1.52015919285059,1.01104889002957,1.25602267690966,1.03575153458869,1.33597925158342,2.08182392119363,1.21786191324856,0.691846491768175,0.452167921657868,0.823120949949934,1.13099932196708,2.96633961281249,1.15679485535929,0.884610551949874,0.161766849947409,1.32504911076236,0.484875253135222,0,0.878342391034642,0.209446706813455,5.36459815938042,1.67741174308288,1.19980546198682,1.27070227073065,0.599162557619291,0.457500602818626,2.76439574648302,0.521472960576829,0.255715457330331,0.20778804455956,1.29793010454206,0.611036183101898,0.373220911830279,1.0108910337347,1.47309299120532,1.04096354370163,0.689706313300419,0.540186389416048,1.50704817835715,1.08858398642125,0.384341160854549,0.468508622798644,0.258703370739016,1.29340795759705,0.756424320671277,1.40760899331159,1.7535658594206,0.834141747676794,0.696504333044333,0,0.59710280045548,1.40442637462647,0.51469581422943,1.13665399758237,0.414251545071004,0.469052119962192,0.900310307305074,0.710234206755631,0.983821158737019,0.617068451549513,0.697601834251224,0.536546802799238,0.817357396570186,0.822799249567402,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0.268412837520744,0.630869845692382,0.617427674275707,6.93879444265976,3.43785736662608,0.853153002140936,1.62565670302307,1.03093969057675,2.42020229548011,2.66853652613844,3.99473814836374,5.69434873853414,4.94096864172033,4.02136334080431,1.98956472041151,2.33956904542944,2.69645822596266,3.8904848977445,4.18196673834171,1.13800740571849,1.14248512609729,0,0.610953983535943,1.35766741017338,0.701358198903186,1.7706230394792,2.80459281161244,1.72698600625512,3.45512058981041,0.296452627087149,1.33476084572875,2.16214894624523,0.899448449539415,0.608580364165509,0.72353147925725,1.2731292589071,1.72617682470486,1.94562272130042,1.37280706594041,0,0.372140947668503,0.936113019343682,0.252578877947112,0.717589654087649,0,0.554259570499814,0.37898282354097,0.977789858652155,1.01847051465113,0.938760993154008,0.837531287209079,0.476087281772027,1.36593553500459,0.945810864637146,0.44292937929755,0.956728611944923,0.491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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52710 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9D8F3 | |||
|association_with_transcript=-39bp_to_ENSMUST00000023220,NM_029643,uc007wkt.1,uc007wku.1_5end | |||
|cluster_id=chr15:76369307..76369333,+ | |||
|description=CAGE_peak_4_at_Gpr172b_5end | |||
|id=chr15:76369307..76369333,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.45e-09!115;CL:0000004!4.45e-09!115;CL:0000255!4.45e-09!115;CL:0000063!2.53e-08!66;CL:0002371!4.10e-08!118;CL:0000144!5.46e-08!121;CL:0000012!5.46e-08!121;CL:0002031!1.82e-07!25;CL:0000219!6.57e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.66e-08,25;CL:0000988,2.65e-07,32;CL:0002032,2.65e-07,32;CL:0000037,2.65e-07,32;CL:0000837,2.65e-07,32;CL:0000219,3.90e-07,54;CL:0002320,6.16e-07,46;CL:0000134,6.16e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.90e-09!43;UBERON:0000344!4.31e-09!15;UBERON:0001242!6.90e-08!13;UBERON:0000060!6.90e-08!13;UBERON:0001262!6.90e-08!13;UBERON:0004786!6.90e-08!13;UBERON:0005409!1.68e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.82e-14,31;UBERON:0000344,5.99e-10,15;UBERON:0005409,4.79e-09,47;UBERON:0001242,1.31e-08,13;UBERON:0001262,1.31e-08,13;UBERON:0004786,1.31e-08,13;UBERON:0002384,6.16e-07,46;UBERON:0004923,7.16e-07,24 | |||
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| |||
|short_description=p4@Gpr172b | |||
}} |
Latest revision as of 00:53, 27 September 2015
Short description: | p4@Gpr172b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gpr172b_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENSMUST00000023220, NM_029643, uc007wkt.1, uc007wku.1_5end |
EntrezGene: | Gpr172b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.66e-08 | 25 |
hematopoietic cell | 2.65e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.65e-07 | 32 |
hematopoietic stem cell | 2.65e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.65e-07 | 32 |
motile cell | 3.90e-07 | 54 |
connective tissue cell | 6.16e-07 | 46 |
mesenchymal cell | 6.16e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.82e-14 | 31 |
mucosa | 5.99e-10 | 15 |
gastrointestinal system | 4.79e-09 | 47 |
intestinal mucosa | 1.31e-08 | 13 |
wall of intestine | 1.31e-08 | 13 |
gastrointestinal system mucosa | 1.31e-08 | 13 |
connective tissue | 6.16e-07 | 46 |
organ component layer | 7.16e-07 | 24 |