FFCP PHASE1:Mm9::chr11:117060992..117061006,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53860 | |EntrezGene=53860 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2640 | |||
|TSSclassifier=NA | |||
|UniProt=Q80UG5 | |UniProt=Q80UG5 | ||
|association_with_transcript=17bp_to_ENSMUST00000093907,NM_001113486,uc007mnd.2_5end | |association_with_transcript=17bp_to_ENSMUST00000093907,NM_001113486,uc007mnd.2_5end | ||
|cluster_id=chr11:117060992..117061006,+ | |||
|description=CAGE_peak_14_at_Sept9_5end | |description=CAGE_peak_14_at_Sept9_5end | ||
|id=chr11:117060992..117061006,+ | |id=chr11:117060992..117061006,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.05e-08!25 | |ontology_enrichment_celltype=CL:0000066!8.05e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-09,25;CL:0000223,1.06e-08,20;CL:0002563,2.41e-07,9;CL:0002251,2.41e-07,9;CL:0002076,6.05e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.89e-25!130;UBERON:0000925!6.89e-25!130;UBERON:0006595!6.89e-25!130;UBERON:0001007!6.41e-24!128;UBERON:0001555!6.41e-24!128;UBERON:0007026!6.41e-24!128;UBERON:0004921!1.33e-22!126;UBERON:0004185!1.33e-22!126;UBERON:0005409!4.82e-16!59;UBERON:0000160!2.45e-15!43;UBERON:0004923!5.21e-10!24;UBERON:0000077!6.57e-10!97;UBERON:0000344!1.90e-09!15;UBERON:0000466!8.57e-09!79;UBERON:0002365!1.24e-08!25;UBERON:0002330!1.24e-08!25;UBERON:0001041!1.39e-08!92;UBERON:0001242!3.07e-08!13;UBERON:0000060!3.07e-08!13;UBERON:0001262!3.07e-08!13;UBERON:0004786!3.07e-08!13;UBERON:0009569!4.76e-08!66;UBERON:0009854!1.16e-07!23;UBERON:0009856!1.16e-07!23;UBERON:0005177!1.30e-07!85;UBERON:0002107!2.29e-07!22;UBERON:0007499!2.29e-07!22;UBERON:0006925!2.29e-07!22;UBERON:0009497!2.29e-07!22;UBERON:0000015!2.29e-07!22;UBERON:0002423!2.29e-07!22;UBERON:0006235!2.29e-07!22;UBERON:0008835!2.29e-07!22;UBERON:0003894!2.29e-07!22;UBERON:0004161!2.29e-07!22;UBERON:0008836!2.29e-07!22;UBERON:0005911!5.17e-07!69;UBERON:0003104!6.01e-07!131;UBERON:0009142!6.01e-07!131 | |ontology_enrichment_uberon=UBERON:0004119!6.89e-25!130;UBERON:0000925!6.89e-25!130;UBERON:0006595!6.89e-25!130;UBERON:0001007!6.41e-24!128;UBERON:0001555!6.41e-24!128;UBERON:0007026!6.41e-24!128;UBERON:0004921!1.33e-22!126;UBERON:0004185!1.33e-22!126;UBERON:0005409!4.82e-16!59;UBERON:0000160!2.45e-15!43;UBERON:0004923!5.21e-10!24;UBERON:0000077!6.57e-10!97;UBERON:0000344!1.90e-09!15;UBERON:0000466!8.57e-09!79;UBERON:0002365!1.24e-08!25;UBERON:0002330!1.24e-08!25;UBERON:0001041!1.39e-08!92;UBERON:0001242!3.07e-08!13;UBERON:0000060!3.07e-08!13;UBERON:0001262!3.07e-08!13;UBERON:0004786!3.07e-08!13;UBERON:0009569!4.76e-08!66;UBERON:0009854!1.16e-07!23;UBERON:0009856!1.16e-07!23;UBERON:0005177!1.30e-07!85;UBERON:0002107!2.29e-07!22;UBERON:0007499!2.29e-07!22;UBERON:0006925!2.29e-07!22;UBERON:0009497!2.29e-07!22;UBERON:0000015!2.29e-07!22;UBERON:0002423!2.29e-07!22;UBERON:0006235!2.29e-07!22;UBERON:0008835!2.29e-07!22;UBERON:0003894!2.29e-07!22;UBERON:0004161!2.29e-07!22;UBERON:0008836!2.29e-07!22;UBERON:0005911!5.17e-07!69;UBERON:0003104!6.01e-07!131;UBERON:0009142!6.01e-07!131 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.01e-21,118;UBERON:0000925,1.01e-21,118;UBERON:0006595,1.01e-21,118;UBERON:0001007,1.14e-20,116;UBERON:0001555,1.14e-20,116;UBERON:0007026,1.14e-20,116;UBERON:0004921,3.02e-19,114;UBERON:0000160,4.96e-17,31;UBERON:0005409,6.79e-15,47;UBERON:0000344,9.49e-12,15;UBERON:0004923,1.25e-10,24;UBERON:0001242,3.43e-10,13;UBERON:0001262,3.43e-10,13;UBERON:0004786,3.43e-10,13;UBERON:0002365,5.53e-09,25;UBERON:0002330,5.53e-09,25;UBERON:0009854,8.59e-08,23;UBERON:0009856,8.59e-08,23;UBERON:0003929,1.15e-07,55;UBERON:0002107,2.01e-07,22;UBERON:0007499,2.01e-07,22;UBERON:0006925,2.01e-07,22;UBERON:0009497,2.01e-07,22;UBERON:0000015,2.01e-07,22;UBERON:0002423,2.01e-07,22;UBERON:0006235,2.01e-07,22;UBERON:0008835,2.01e-07,22;UBERON:0003894,2.01e-07,22;UBERON:0004161,2.01e-07,22;UBERON:0008836,2.01e-07,22;UBERON:0003350,2.41e-07,9;UBERON:0004808,2.41e-07,9;UBERON:0001277,2.41e-07,9 | |||
|phase1_expression=0.320297694209588,4.18770489167233,4.54999239389536,4.53696316960245,4.50806156951712,5.03637815735669,3.27057696833736,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,1.10556277196391,0,0,4.15980299262857,4.35877634027623,3.44539178469012,5.1691439539089,4.95583835177545,3.99049180858385,4.03248207615889,2.43903561720835,0,0,0,2.88851619751275,1.82858109894342,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,1.73918693221007,2.58127163094416,0.679971333707751,3.77792234146472,5.84798775702902,4.48026887097336,1.82577746171277,0,0,0,0.563373679106722,0,0,0,4.76280290224671,4.30711771307668,5.05524445014783,1.7127581957859,1.29468941823586,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.502666365318702,3.95511948374998,1.87979163995885,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.407357455401265,1.61729061793121,2.0217820674694,5.47148825304832,0,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.374806898238915,0.776110112217047,1.07783996466421,0.756424320671277,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,4.62586296177317,3.96675849995316,0.213288250535234,1.85789337488351,0.902072229254653,2.62188582010345,2.2237804384487,1.90225626112559,2.37264530772256,2.47048432086016,3.01602250560323,1.98956472041151,2.9244613067868,4.49409704327111,3.45820879799511,2.38969527905241,0.569003702859245,0.799739588268102,2.25415471346161,1.4255592949172,1.55161989734101,1.05203729835478,0.822074982615345,0.442830443938806,1.56998727841375,0.616985819609003,3.85388415213294,0.333690211432188,2.16214894624523,1.34917267430912,1.62288097110802,2.41177159752417,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,4.31304619582064,0.372140947668503,2.18426371180192,7.32478746046624,3.76734568396016,3.85954817090694,0.184753190166605,0.757965647081939,2.11854469374634,2.03694102930226,2.34690248288502,2.1775813467436,1.90434912708811,0.780534591431195,0.157635144106191,0,0.797273843287435,0.163863314715738,0.863424909329478,0.289298117163023,0,0,3.93411418415229,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.24645922567079,0.977321756121456,2.8044920905331,1.32745138339963,1.94224508923985,1.51161778482376,1.13163047853539,2.06711325016541,2.45948118355142,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,3.16255825724996,1.03135543248187,1.36175842301515,0.540183282093931,1.03486947026204,1.71469628025274,1.41872186913819,0.891844088010353,0.822745103010605,0.304464949114599,1.40803024838226,4.44847348814022,0.441056796109924,2.96795255294664,2.42196640043858,0.965006798850494,1.3130957840345,1.47726809770555,3.49777003955821,0,1.02522528478712,1.44470807574256,0.555583582109135,0.941842285023455,0.683471138605126,1.14389086603261,0,0.279902904647316,0,0,0.632671987162271,2.43983360552218,1.08005340821801,1.04544148007234,0.87345025498471,1.21377911746339,1.81837602595739,1.83229159388821,1.94422459937689,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.77952493786677,1.61124026100733,1.58945083825012,1.20195449519969,0.886137163047463,1.11063094942962,1.447929326445,1.61321896218945,1.36441033035653,1.44317762460494,1.75315353272353,0.680191150845634,5.32766288097755,1.70456327558004,2.3503846290971,2.51146472241848,1.87682475451182,4.2124873581471,3.85863082342319,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.512200817262403,0.972426868273176,0.838452650511929,1.10306105070008,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,1.13175804831646,0.749132059759059,0.512201219238954,0.804096565378586,1.42888107384922,1.62238056322798,1.54327376370964,1.23625770240992,1.03039244094078,1.02860775715625,0.887379030796687,1.43061713968393,0.290692833264657,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,1.22223702461276,1.68342681497322,0.593175090620871,0.886540341380071,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,1.16965804222704,1.28922632428979,0.382576664137687,1.76473135295612,0.695603506861264 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|phase1_expression=0.320297694209588,4.18770489167233,4.54999239389536,4.53696316960245,4.50806156951712,5.03637815735669,3.27057696833736,0,0,0,0,0,0,0,0.333109761815663,0,0,0.473193248037357,0.411343300817216,0.42438965179803,1.10556277196391,0,0,4.15980299262857,4.35877634027623,3.44539178469012,5.1691439539089,4.95583835177545,3.99049180858385,4.03248207615889,2.43903561720835,0,0,0,2.88851619751275,1.82858109894342,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,1.73918693221007,2.58127163094416,0.679971333707751,3.77792234146472,5.84798775702902,4.48026887097336,1.82577746171277,0,0,0,0.563373679106722,0,0,0,4.76280290224671,4.30711771307668,5.05524445014783,1.7127581957859,1.29468941823586,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.502666365318702,3.95511948374998,1.87979163995885,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.407357455401265,1.61729061793121,2.0217820674694,5.47148825304832,0,0,0,0.30140963567143,0.408218994907967,0.12811372028485,0.374806898238915,0.776110112217047,1.07783996466421,0.756424320671277,0.175951124163949,0.657587197282725,0.556094498451196,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0.284163499395593,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,4.62586296177317,3.96675849995316,0.213288250535234,1.85789337488351,0.902072229254653,2.62188582010345,2.2237804384487,1.90225626112559,2.37264530772256,2.47048432086016,3.01602250560323,1.98956472041151,2.9244613067868,4.49409704327111,3.45820879799511,2.38969527905241,0.569003702859245,0.799739588268102,2.25415471346161,1.4255592949172,1.55161989734101,1.05203729835478,0.822074982615345,0.442830443938806,1.56998727841375,0.616985819609003,3.85388415213294,0.333690211432188,2.16214894624523,1.34917267430912,1.62288097110802,2.41177159752417,1.01850340712568,1.72617682470486,1.45921704097532,0.823684239564244,4.31304619582064,0.372140947668503,2.18426371180192,7.32478746046624,3.76734568396016,3.85954817090694,0.184753190166605,0.757965647081939,2.11854469374634,2.03694102930226,2.34690248288502,2.1775813467436,1.90434912708811,0.780534591431195,0.157635144106191,0,0.797273843287435,0.163863314715738,0.863424909329478,0.289298117163023,0,0,3.93411418415229,2.75936746304733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,1.24645922567079,0.977321756121456,2.8044920905331,1.32745138339963,1.94224508923985,1.51161778482376,1.13163047853539,2.06711325016541,2.45948118355142,1.03371317267288,0.727067458955011,0.356497378384721,0.316036757935816,3.16255825724996,1.03135543248187,1.36175842301515,0.540183282093931,1.03486947026204,1.71469628025274,1.41872186913819,0.891844088010353,0.822745103010605,0.304464949114599,1.40803024838226,4.44847348814022,0.441056796109924,2.96795255294664,2.42196640043858,0.965006798850494,1.3130957840345,1.47726809770555,3.49777003955821,0,1.02522528478712,1.44470807574256,0.555583582109135,0.941842285023455,0.683471138605126,1.14389086603261,0,0.279902904647316,0,0,0.632671987162271,2.43983360552218,1.08005340821801,1.04544148007234,0.87345025498471,1.21377911746339,1.81837602595739,1.83229159388821,1.94422459937689,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0.405450430580328,0.616265742988964,0.77952493786677,1.61124026100733,1.58945083825012,1.20195449519969,0.886137163047463,1.11063094942962,1.447929326445,1.61321896218945,1.36441033035653,1.44317762460494,1.75315353272353,0.680191150845634,5.32766288097755,1.70456327558004,2.3503846290971,2.51146472241848,1.87682475451182,4.2124873581471,3.85863082342319,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.512200817262403,0.972426868273176,0.838452650511929,1.10306105070008,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,1.13175804831646,0.749132059759059,0.512201219238954,0.804096565378586,1.42888107384922,1.62238056322798,1.54327376370964,1.23625770240992,1.03039244094078,1.02860775715625,0.887379030796687,1.43061713968393,0.290692833264657,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,1.22223702461276,1.68342681497322,0.593175090620871,0.886540341380071,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,1.16965804222704,1.28922632428979,0.382576664137687,1.76473135295612,0.695603506861264 | ||
|short_description=p14@Sept9 | |short_description=p14@Sept9 | ||
}} | }} |
Latest revision as of 00:52, 27 September 2015
Short description: | p14@Sept9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Sept9_5end |
Coexpression cluster: | MCL_coexpression_mm9:2640 |
Association with transcript: | 17bp_to_ENSMUST00000093907, NM_001113486, uc007mnd.2_5end |
EntrezGene: | Sept9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-09 | 25 |
endodermal cell | 1.06e-08 | 20 |
intestinal epithelial cell | 2.41e-07 | 9 |
epithelial cell of alimentary canal | 2.41e-07 | 9 |
endo-epithelial cell | 6.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.01e-21 | 118 |
endoderm | 1.01e-21 | 118 |
presumptive endoderm | 1.01e-21 | 118 |
digestive system | 1.14e-20 | 116 |
digestive tract | 1.14e-20 | 116 |
primitive gut | 1.14e-20 | 116 |
subdivision of digestive tract | 3.02e-19 | 114 |
intestine | 4.96e-17 | 31 |
gastrointestinal system | 6.79e-15 | 47 |
mucosa | 9.49e-12 | 15 |
organ component layer | 1.25e-10 | 24 |
intestinal mucosa | 3.43e-10 | 13 |
wall of intestine | 3.43e-10 | 13 |
gastrointestinal system mucosa | 3.43e-10 | 13 |
exocrine gland | 5.53e-09 | 25 |
exocrine system | 5.53e-09 | 25 |
digestive tract diverticulum | 8.59e-08 | 23 |
sac | 8.59e-08 | 23 |
gut epithelium | 1.15e-07 | 55 |
liver | 2.01e-07 | 22 |
epithelial sac | 2.01e-07 | 22 |
digestive gland | 2.01e-07 | 22 |
epithelium of foregut-midgut junction | 2.01e-07 | 22 |
anatomical boundary | 2.01e-07 | 22 |
hepatobiliary system | 2.01e-07 | 22 |
foregut-midgut junction | 2.01e-07 | 22 |
hepatic diverticulum | 2.01e-07 | 22 |
liver primordium | 2.01e-07 | 22 |
septum transversum | 2.01e-07 | 22 |
liver bud | 2.01e-07 | 22 |
epithelium of mucosa | 2.41e-07 | 9 |
gastrointestinal system epithelium | 2.41e-07 | 9 |
intestinal epithelium | 2.41e-07 | 9 |