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FFCP PHASE1:Mm9::chr11:117060955..117060977,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53860
|EntrezGene=53860
|HGNC=
|HGNC=
|MCL_coexpression_id=2640
|TSSclassifier=NA
|UniProt=Q80UG5
|UniProt=Q80UG5
|association_with_transcript=0bp_to_ENSMUST00000093907,NM_001113486,uc007mnd.2_5end
|association_with_transcript=0bp_to_ENSMUST00000093907,NM_001113486,uc007mnd.2_5end
|cluster_id=chr11:117060955..117060977,+
|description=CAGE_peak_11_at_Sept9_5end
|description=CAGE_peak_11_at_Sept9_5end
|id=chr11:117060955..117060977,+
|id=chr11:117060955..117060977,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,7.60e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.27e-25!130;UBERON:0000925!7.27e-25!130;UBERON:0006595!7.27e-25!130;UBERON:0001007!9.59e-24!128;UBERON:0001555!9.59e-24!128;UBERON:0007026!9.59e-24!128;UBERON:0004921!7.61e-23!126;UBERON:0004185!7.61e-23!126;UBERON:0005409!2.30e-17!59;UBERON:0000160!3.53e-16!43;UBERON:0000077!4.09e-11!97;UBERON:0001041!8.50e-10!92;UBERON:0000466!9.42e-10!79;UBERON:0003104!5.89e-08!131;UBERON:0009142!5.89e-08!131;UBERON:0004923!1.01e-07!24;UBERON:0005177!1.31e-07!85;UBERON:0000344!3.33e-07!15;UBERON:0009569!7.07e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.66e-19,118;UBERON:0000925,9.66e-19,118;UBERON:0006595,9.66e-19,118;UBERON:0001007,1.13e-17,116;UBERON:0001555,1.13e-17,116;UBERON:0007026,1.13e-17,116;UBERON:0004921,8.09e-17,114;UBERON:0000160,5.75e-14,31;UBERON:0005409,1.55e-13,47;UBERON:0000344,4.19e-08,15;UBERON:0005177,7.29e-08,79;UBERON:0004923,1.15e-07,24;UBERON:0001242,2.28e-07,13;UBERON:0001262,2.28e-07,13;UBERON:0004786,2.28e-07,13
|phase1_expression=0.640595388419176,4.88565570695105,1.81999695755814,6.65421264875026,5.50985302940982,3.69334398206158,2.80335168714631,0,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0.42438965179803,1.61582251287033,0,0,2.07990149631429,3.67054849707472,2.8711598205751,1.7230479846363,4.74036711908956,3.6104449696711,4.78857246543868,1.10865255327652,0,0,0,2.88851619751275,2.65975432573588,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,3.18850937571846,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,4.48026887097336,2.24711072210803,0,0,0,2.81686839553361,0,0,0,3.24736561516821,4.81383744402687,3.0331466700887,1.48439043634778,0.517875767294343,0,0.867426633830679,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.628332956648377,5.19109432242185,1.01219549843938,0,0.970601099684455,0.662524555381181,0,1.86391761218122,0,0,5.36459815938042,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,1.52759045775474,2.11491850037158,2.27450482590307,2.31486041475121,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0.768682321709099,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.879755620819744,1.53437012699302,3.05851974148158,2.43776516565517,1.4404749548556,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,1.2604344302271,0.23674473558521,0.393528463494808,0.617068451549513,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.411618449517138,5.94753809370836,2.11560453330835,0.639864751605702,1.16118335930219,1.54640953586512,3.63030344322017,3.11329261382818,4.1849637744763,3.32170343081158,3.12928013975621,4.77536896720512,5.17286827306992,3.11942539390592,4.49409704327111,3.24207074812041,2.19055400579804,0.569003702859245,1.71372768914593,3.38123207019241,2.03651327845314,2.71533482034676,2.03393877681924,1.83385957660346,1.47610147979602,2.66897837330337,2.83813477020141,3.26097889795864,0.500535317148282,1.57247196090562,0.899448449539415,1.42002084971952,1.4470629585145,2.5462585178142,2.30156909960649,2.7562988551756,1.64736847912849,1.43768206527355,3.72140947668503,2.49630138491648,4.54641980304801,4.30553792452589,3.37710464954357,0,0.568474235311454,2.11854469374634,2.54617628662782,3.52035372432753,3.68513766371995,2.61848004974615,0.585400943573396,0.945810864637146,0.221464689648775,1.11618338060241,0.491589944147214,1.03610989119537,0.867894351489069,0,0,2.45882136509518,4.13905119457099,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,3.20518086601059,1.46598263418218,2.3095817216155,2.65490276679926,3.8844901784797,4.83717691143602,1.50884063804718,1.77181135728464,1.53717573971964,2.84271122485043,3.27180356529755,3.20847640546249,1.26414703174326,2.10837217149998,3.09406629744561,0.680879211507576,1.98067203434441,1.03486947026204,2.35770738534752,1.24138163549592,2.49716344642899,2.63278432963394,5.48036908406279,2.3467170806371,7.62595455109753,0.661585194164886,4.61681508236144,2.58343082713449,3.01564624640779,2.14870219205646,2.9545361954111,3.49777003955821,0,0.854354403989263,3.09580301944834,1.29636169158798,0.376736914009382,0.683471138605126,1.14389086603261,0.509935289981566,0.419854356970974,0.414599921413271,0.954670618015114,1.10717597753397,3.04979200690273,3.34816556547584,2.29997125615916,1.74690050996942,1.48350781023303,2.31429676030941,1.57053565190418,3.36998930558661,4.34937519160848,0,0.299033092087958,0.992750942742586,1.75006069509643,1.42075805825504,1.35164900392623,0.469428954583016,1.17183946359555,0.734015410979976,0,0.288030006257865,2.52808896502543,3.64905387522296,0.924398614483445,1.29920822977795,1.43221356533985,2.78153896693771,1.32214994471966,1.03382669022204,1.81739609906666,3.27689268616499,2.31900225814733,1.16949456887703,1.05833025804362,2.92192255453922,0.906921534460845,6.88156455459601,4.48569283047379,2.85403847818933,1.9318959403219,2.25218970541418,3.47988086107804,4.50173596066038,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,0.243106717068294,1.04806581313991,1.2869045591501,0.222246727801615,1.44224540067226,1.60459604795908,0.252697211763798,1.2673964994512,0.943131706930381,0.936415074698824,0.960377286073039,0.861532034334199,1.42888107384922,1.27472758539341,0.578727661391115,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,1.1921809497366,0.581385666529314,0.752875043322645,1.4384483341585,1.46342378298218,2.36762740294059,1.08643291076689,1.12228454331548,0.711810108745045,0.492522411877817,0,0.464810523557898,0.771626443924566,0.249810577937946,2.10538447600868,1.71896843238639,1.14772999241306,1.10295709559758,0.231867835620421
|phase1_expression=0.640595388419176,4.88565570695105,1.81999695755814,6.65421264875026,5.50985302940982,3.69334398206158,2.80335168714631,0,0,0.234064526321993,0.171217968225505,0,0.171200729931206,0,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0.42438965179803,1.61582251287033,0,0,2.07990149631429,3.67054849707472,2.8711598205751,1.7230479846363,4.74036711908956,3.6104449696711,4.78857246543868,1.10865255327652,0,0,0,2.88851619751275,2.65975432573588,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,0,0.449949858640699,0,1.4209602298922,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.0755715601067855,3.18850937571846,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,4.48026887097336,2.24711072210803,0,0,0,2.81686839553361,0,0,0,3.24736561516821,4.81383744402687,3.0331466700887,1.48439043634778,0.517875767294343,0,0.867426633830679,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.628332956648377,5.19109432242185,1.01219549843938,0,0.970601099684455,0.662524555381181,0,1.86391761218122,0,0,5.36459815938042,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0.162241263067758,1.52759045775474,2.11491850037158,2.27450482590307,2.31486041475121,0.130120442962704,0,0.180062129805349,0.30140963567143,0.340182495756639,0.768682321709099,0.562210347358373,2.58703370739016,1.29340795759705,0.945530400839096,0.879755620819744,1.53437012699302,3.05851974148158,2.43776516565517,1.4404749548556,2.18937693500343,0,0,0,0.207125772535502,0.469052119962192,1.2604344302271,0.23674473558521,0.393528463494808,0.617068451549513,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0,0,0.411618449517138,5.94753809370836,2.11560453330835,0.639864751605702,1.16118335930219,1.54640953586512,3.63030344322017,3.11329261382818,4.1849637744763,3.32170343081158,3.12928013975621,4.77536896720512,5.17286827306992,3.11942539390592,4.49409704327111,3.24207074812041,2.19055400579804,0.569003702859245,1.71372768914593,3.38123207019241,2.03651327845314,2.71533482034676,2.03393877681924,1.83385957660346,1.47610147979602,2.66897837330337,2.83813477020141,3.26097889795864,0.500535317148282,1.57247196090562,0.899448449539415,1.42002084971952,1.4470629585145,2.5462585178142,2.30156909960649,2.7562988551756,1.64736847912849,1.43768206527355,3.72140947668503,2.49630138491648,4.54641980304801,4.30553792452589,3.37710464954357,0,0.568474235311454,2.11854469374634,2.54617628662782,3.52035372432753,3.68513766371995,2.61848004974615,0.585400943573396,0.945810864637146,0.221464689648775,1.11618338060241,0.491589944147214,1.03610989119537,0.867894351489069,0,0,2.45882136509518,4.13905119457099,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.425820255624806,3.20518086601059,1.46598263418218,2.3095817216155,2.65490276679926,3.8844901784797,4.83717691143602,1.50884063804718,1.77181135728464,1.53717573971964,2.84271122485043,3.27180356529755,3.20847640546249,1.26414703174326,2.10837217149998,3.09406629744561,0.680879211507576,1.98067203434441,1.03486947026204,2.35770738534752,1.24138163549592,2.49716344642899,2.63278432963394,5.48036908406279,2.3467170806371,7.62595455109753,0.661585194164886,4.61681508236144,2.58343082713449,3.01564624640779,2.14870219205646,2.9545361954111,3.49777003955821,0,0.854354403989263,3.09580301944834,1.29636169158798,0.376736914009382,0.683471138605126,1.14389086603261,0.509935289981566,0.419854356970974,0.414599921413271,0.954670618015114,1.10717597753397,3.04979200690273,3.34816556547584,2.29997125615916,1.74690050996942,1.48350781023303,2.31429676030941,1.57053565190418,3.36998930558661,4.34937519160848,0,0.299033092087958,0.992750942742586,1.75006069509643,1.42075805825504,1.35164900392623,0.469428954583016,1.17183946359555,0.734015410979976,0,0.288030006257865,2.52808896502543,3.64905387522296,0.924398614483445,1.29920822977795,1.43221356533985,2.78153896693771,1.32214994471966,1.03382669022204,1.81739609906666,3.27689268616499,2.31900225814733,1.16949456887703,1.05833025804362,2.92192255453922,0.906921534460845,6.88156455459601,4.48569283047379,2.85403847818933,1.9318959403219,2.25218970541418,3.47988086107804,4.50173596066038,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.682934423016537,0.243106717068294,1.04806581313991,1.2869045591501,0.222246727801615,1.44224540067226,1.60459604795908,0.252697211763798,1.2673964994512,0.943131706930381,0.936415074698824,0.960377286073039,0.861532034334199,1.42888107384922,1.27472758539341,0.578727661391115,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,1.1921809497366,0.581385666529314,0.752875043322645,1.4384483341585,1.46342378298218,2.36762740294059,1.08643291076689,1.12228454331548,0.711810108745045,0.492522411877817,0,0.464810523557898,0.771626443924566,0.249810577937946,2.10538447600868,1.71896843238639,1.14772999241306,1.10295709559758,0.231867835620421
|short_description=p11@Sept9
|short_description=p11@Sept9
}}
}}

Latest revision as of 00:52, 27 September 2015

Short description:p11@Sept9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_11_at_Sept9_5end
Coexpression cluster:MCL_coexpression_mm9:2640
Association with transcript: 0bp_to_ENSMUST00000093907, NM_001113486, uc007mnd.2_5end
EntrezGene:Sept9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p11@Sept9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I24.74
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.03
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H33.02
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G42.78
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D54.50
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell7.60e-0725

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.66e-19118
endoderm9.66e-19118
presumptive endoderm9.66e-19118
digestive system1.13e-17116
digestive tract1.13e-17116
primitive gut1.13e-17116
subdivision of digestive tract8.09e-17114
intestine5.75e-1431
gastrointestinal system1.55e-1347
mucosa4.19e-0815
trunk region element7.29e-0879
organ component layer1.15e-0724
intestinal mucosa2.28e-0713
wall of intestine2.28e-0713
gastrointestinal system mucosa2.28e-0713
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