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FFCP PHASE1:Mm9::chr4:45031491..45031547,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:45031491..45031547,+
|DHSsupport=NA
|short_description=p1@Polr1e
|DPIdataset=NA
|description=CAGE_peak_1_at_Polr1e_5end
|association_with_transcript=0bp_to_ENSMUST00000029999,ENSMUST00000107814,NM_022811,uc008sse.1,uc012ddk.1_5end
|EntrezGene=64424
|EntrezGene=64424
|HGNC=
|HGNC=
|MCL_coexpression_id=301
|TSSclassifier=NA
|UniProt=Q8K202,Q3V1B9
|UniProt=Q8K202,Q3V1B9
|association_with_transcript=0bp_to_ENSMUST00000029999,ENSMUST00000107814,NM_022811,uc008sse.1,uc012ddk.1_5end
|cluster_id=chr4:45031491..45031547,+
|description=CAGE_peak_1_at_Polr1e_5end
|id=chr4:45031491..45031547,+
|ontology_enrichment_celltype=CL:0000988!2.37e-10!32;CL:0002032!2.37e-10!32;CL:0000037!2.37e-10!32;CL:0000566!2.37e-10!32;CL:0000837!2.37e-10!32;CL:0000542!8.60e-08!13;CL:0000051!8.60e-08!13;CL:0002031!1.59e-07!25;CL:0000838!2.00e-07!12;CL:0000084!2.34e-07!11;CL:0000827!2.34e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000988,2.37e-10,32;CL:0002032,2.37e-10,32;CL:0000037,2.37e-10,32;CL:0000837,2.37e-10,32;CL:0000542,8.60e-08,13;CL:0000051,8.60e-08,13;CL:0002031,1.59e-07,25;CL:0000838,2.00e-07,12;CL:0000084,2.34e-07,11;CL:0000827,2.34e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.39e-08!29;UBERON:0003081!1.53e-08!88;UBERON:0007100!7.12e-08!18;UBERON:0000948!7.12e-08!18;UBERON:0005498!7.12e-08!18;UBERON:0004140!7.12e-08!18;UBERON:0009881!7.12e-08!18;UBERON:0004141!7.12e-08!18;UBERON:0003084!7.12e-08!18;UBERON:0007005!7.12e-08!18;UBERON:0004139!7.12e-08!18;UBERON:0004291!7.12e-08!18;UBERON:0000926!7.59e-08!193;UBERON:0004120!7.59e-08!193;UBERON:0006603!7.59e-08!193;UBERON:0002370!1.06e-07!23;UBERON:0000974!1.06e-07!23;UBERON:0004807!1.06e-07!23;UBERON:0005058!1.06e-07!23;UBERON:0003351!1.06e-07!23;UBERON:0009113!1.06e-07!23;UBERON:0003295!1.06e-07!23;UBERON:0009722!1.06e-07!23;UBERON:0005562!1.06e-07!23;UBERON:0007690!1.06e-07!23;UBERON:0001048!1.29e-07!147;UBERON:0000072!1.57e-07!27;UBERON:0003408!5.74e-07!24;UBERON:0006562!7.13e-07!24;UBERON:0001557!7.13e-07!24;UBERON:0001042!7.13e-07!24;UBERON:0008814!7.13e-07!24;UBERON:0009145!7.13e-07!24;UBERON:0002390!8.46e-07!45;UBERON:0003061!8.46e-07!45
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.88e-10,120;UBERON:0004120,4.88e-10,120;UBERON:0006603,4.88e-10,120;UBERON:0004177,1.39e-08,29;UBERON:0005057,1.39e-08,29;UBERON:0003081,3.91e-08,87;UBERON:0007100,7.12e-08,18;UBERON:0000948,7.12e-08,18;UBERON:0005498,7.12e-08,18;UBERON:0004140,7.12e-08,18;UBERON:0009881,7.12e-08,18;UBERON:0004141,7.12e-08,18;UBERON:0003084,7.12e-08,18;UBERON:0007005,7.12e-08,18;UBERON:0004139,7.12e-08,18;UBERON:0004291,7.12e-08,18;UBERON:0002370,1.06e-07,23;UBERON:0000974,1.06e-07,23;UBERON:0004807,1.06e-07,23;UBERON:0005058,1.06e-07,23;UBERON:0003351,1.06e-07,23;UBERON:0009113,1.06e-07,23;UBERON:0003295,1.06e-07,23;UBERON:0009722,1.06e-07,23;UBERON:0005562,1.06e-07,23;UBERON:0007690,1.06e-07,23;UBERON:0000072,1.57e-07,27;UBERON:0000077,5.23e-07,35;UBERON:0003408,5.74e-07,24;UBERON:0006562,7.13e-07,24;UBERON:0001557,7.13e-07,24;UBERON:0001042,7.13e-07,24;UBERON:0008814,7.13e-07,24;UBERON:0009145,7.13e-07,24;UBERON:0002390,8.46e-07,45;UBERON:0003061,8.46e-07,45
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48498,9.72048067396211,10.6635030967379,9.60795280483181,11.5983337890946,7.10819719237889,8.63794608547298,6.99920855775682,6.83473244395618,23.675103424736,12.8584229597822,15.7185565934243,15.5560950675238,12.9159823477731,15.20605129417,9.50593633030607,9.63512447845231,11.3248091979768,20.2930661493845,25.3466405506922,11.6924114632426,18.6507198066951,18.3852613325041,18.3188360398691,14.859215740401,14.1063761894698,15.1446266395161,16.3935375163781,16.0536655417555,12.878950324695,14.1156659191577,13.0593560191268,12.5075394132428,17.6484122294169,5.8949899739955,27.9702301251322,45.9334945840516,23.8396155236991,11.204996453867,7.50729901804728,10.6227942075014,13.5052078819811,6.01886524842436,4.51801474093653,7.82552902062201,6.30185064783336,7.04598047609119,4.11049511862385,10.5755145634558,10.8003600037089,7.20513925158753,5.43770890781046,5.69536342927002,14.8415907045373,13.9658705690361,13.3172212488225,13.1277627216879,10.2710449687711,8.27295788025063,9.77885602327107,6.59312183164461,7.06022261101994,9.34979683526051,7.09742039692671,9.05406438653166,6.83583004530142,8.70742072706222,10.2809489430548,4.28664322154766,7.64836551236046,10.9958255664312,4.94503080963968,8.97913412819824,8.57173130963539,7.80893547101085,7.62995807831427,6.83128158171944,7.43464105281112,7.53070010235921,7.3171189149109,9.47050961176234,7.4692262615224,9.53941861818155,7.23673610557462,7.38783617816726,5.72923460437565,8.6764631064141,8.10207766120794,5.74564329257276,9.82512755470715,7.09074478359384,6.88637995447836,5.51478547798789,6.26043156175138
|phase1_expression=11.2104192973356,1.39590163055744,0.909998478779072,0.30246421130683,0,11.2479112180966,11.9142446703718,18.8520052224701,49.9799963638417,43.7700664222128,67.2886615126235,66.3704362841199,22.9408978107816,23.5160882507103,15.6561588053361,13.7683181825082,12.5921138063066,18.612267756136,19.6073640056206,20.3707032863054,8.58937230525805,17.8723712161594,23.2467812333652,8.63959083084396,5.96464130774642,1.14846392823004,3.4460959692726,6.89507944594845,6.84084310042946,3.52842181663903,7.31710685162506,48.262331182932,42.4394703433353,47.5445043046316,22.5304263405994,23.6053196409059,16.9460565697766,3.34825304589526,10.9386948233332,9.42342739152837,2.94115744015507,4.09827290975067,3.39857247121808,9.69405498411945,7.80602370390262,8.81024410376071,2.34717403304412,3.70642765846759,4.61340983742391,3.4997381833371,5.17949760013841,1.43752564364972,12.9192606664457,14.5072428402269,18.4851589528355,10.2903774414379,7.16333599846892,8.76642556871652,7.68802551266472,10.5798195854407,8.87363964908651,10.5041804941431,4.4464739805557,1.7997994345628,2.96659908770092,3.5524005747305,2.99600110518405,6.14749288514487,9.85051316930538,11.4755047581937,10.7265730289205,5.42736870367227,6.40518768759679,8.57435594504678,9.96792898589658,4.5960939330501,3.30347642998166,9.70423769447427,9.36999852863085,8.17694983927202,11.3444678066988,9.37644067002168,6.42120897703176,11.2552522006336,7.48711414106369,6.77645746589436,9.25415925194169,13.9799584368975,17.5684768532987,8.84187253249391,5.79728977403356,2.58127163094416,7.47968467078526,8.09554787456726,9.74664626171504,6.72040330646003,7.44355426698285,6.64678258054425,7.01422212427746,7.0667914902068,10.140726223921,7.69958864485907,12.7402619853323,7.11066703153331,13.2059535016841,16.2150313904063,12.1325866803548,8.67797485864856,25.1169747137757,8.31275978763019,13.7053408145247,11.2652226975492,8.53277339847416,11.0027527603414,8.81915303517786,8.41966161908826,4.6967043869531,6.79616977523585,11.4999371753484,6.63244084784378,7.72945314611377,6.78825354389311,16.775258509631,4.09893115816166,5.23616767033638,8.17462576667492,15.6957813102756,22.1964010467561,17.0274104277907,7.9389038884556,3.66000482254901,8.79580464790051,5.04090528557602,7.67146371990992,8.3115217823824,8.11206315338788,9.16554274652847,6.84238338355512,7.58168275301024,5.05060454127538,12.6216829673823,11.7250073261071,10.0834792690996,11.0014517020072,9.18492738542926,11.2740073850668,9.93238280333126,7.50239775143145,15.5208954911646,13.0483195315795,10.205165201509,10.302199424096,11.6779844674751,10.7958171621872,10.2891068203972,13.335295876839,15.4486901208912,20.3304846620625,17.0498099637356,17.6056906655177,17.3549284386011,23.948254174315,23.674473558521,30.8919843843424,31.1619568032504,38.3681008838173,32.1928081679543,31.5266424391358,27.9751744852917,36.28100956148,29.3469090555998,28.2165975730891,23.9309625667245,13.6890547135579,6.51898840548794,9.77593817603202,1.65209391491899,8.46241813323342,16.6364835417482,15.0953836709285,12.371276286921,11.8993279527772,10.6741461045538,6.84812254005213,8.0669940462567,8.72904460037258,7.79139147280835,6.16765063327568,7.40863531052657,7.19055526923377,7.78096979548899,4.97853183135918,18.0184505905428,14.3953125888258,13.5249282807697,12.0154283428735,9.30971938404604,7.50453272826409,8.03104021478068,8.85660887877613,8.94892748695836,10.488758933353,10.3758419480502,16.3508203601772,17.1006325748487,13.4917267430912,7.30296436998611,8.20002343158217,7.63877555344259,9.49397253587675,12.8086829152278,9.60964946158285,2.87536413054709,5.20997326735905,4.99260276983297,7.57736633841335,9.50806291666135,8.68398338454061,6.09685527549795,16.2962614122617,11.5705133273838,15.9560380628677,7.04070744865506,7.53778158488171,5.47500374037832,5.46374214001837,6.9359463406724,6.64394068946325,5.26200736569707,9.01248230936559,7.25276923836761,4.91806799177139,6.03165135757089,7.61467957346193,13.277635371514,11.313406598494,8.83028244932856,8.67366480782304,9.3442918864705,5.30188947129183,11.3582958989852,11.7131623288992,11.2020166821055,8.36390792833932,13.8135177931084,10.4738316391868,8.50102473517278,9.64444331107329,11.4633455604492,8.67567554338879,9.08416545332919,11.3961986347043,10.4247653986289,11.3829384851049,7.96470830039777,14.5668381692989,14.2092071773433,12.6365403436452,13.5838870725155,8.30074899448604,11.1124166062335,12.7236805317127,8.91243445961803,17.6980584444057,12.6502330289999,13.4076206222643,5.10659408630682,12.9643987702543,11.2542054890996,8.3591443662321,11.5271151867478,8.20496560969525,7.73380396829969,10.656273219011,15.0189893160775,6.14313005505079,6.3953235435939,15.4993077764991,7.26589920131575,11.3388298864933,11.5791173683042,13.1312719796049,7.86998258900597,8.52956389248344,10.5939946094669,13.8279201535359,14.0747840800981,11.6788443342908,15.0363650493128,12.1252431799457,11.0485979496006,12.4556792568056,8.98299829728755,8.59203556213602,16.9239756565907,10.9792512248498,9.72048067396211,10.6635030967379,9.60795280483181,11.5983337890946,7.10819719237889,8.63794608547298,6.99920855775682,6.83473244395618,23.675103424736,12.8584229597822,15.7185565934243,15.5560950675238,12.9159823477731,15.20605129417,9.50593633030607,9.63512447845231,11.3248091979768,20.2930661493845,25.3466405506922,11.6924114632426,18.6507198066951,18.3852613325041,18.3188360398691,14.859215740401,14.1063761894698,15.1446266395161,16.3935375163781,16.0536655417555,12.878950324695,14.1156659191577,13.0593560191268,12.5075394132428,17.6484122294169,5.8949899739955,27.9702301251322,45.9334945840516,23.8396155236991,11.204996453867,7.50729901804728,10.6227942075014,13.5052078819811,6.01886524842436,4.51801474093653,7.82552902062201,6.30185064783336,7.04598047609119,4.11049511862385,10.5755145634558,10.8003600037089,7.20513925158753,5.43770890781046,5.69536342927002,14.8415907045373,13.9658705690361,13.3172212488225,13.1277627216879,10.2710449687711,8.27295788025063,9.77885602327107,6.59312183164461,7.06022261101994,9.34979683526051,7.09742039692671,9.05406438653166,6.83583004530142,8.70742072706222,10.2809489430548,4.28664322154766,7.64836551236046,10.9958255664312,4.94503080963968,8.97913412819824,8.57173130963539,7.80893547101085,7.62995807831427,6.83128158171944,7.43464105281112,7.53070010235921,7.3171189149109,9.47050961176234,7.4692262615224,9.53941861818155,7.23673610557462,7.38783617816726,5.72923460437565,8.6764631064141,8.10207766120794,5.74564329257276,9.82512755470715,7.09074478359384,6.88637995447836,5.51478547798789,6.26043156175138
|short_description=p1@Polr1e
}}
}}

Latest revision as of 00:50, 27 September 2015

Short description:p1@Polr1e
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Polr1e_5end
Coexpression cluster:MCL_coexpression_mm9:301
Association with transcript: 0bp_to_ENSMUST00000029999, ENSMUST00000107814, NM_022811, uc008sse.1, uc012ddk.1_5end
EntrezGene:Polr1e
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Polr1e

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E749.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E667.29
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F166.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.77
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.61
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B96.84
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I348.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G642.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D917.57
Mouse Schwann, donor2.CNhs12573.11746-123F98.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.68
accessory axillary lymph node, adult.CNhs10475.1063-29H925.12
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C513.71
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F511.00
adrenal gland, neonate N00.CNhs11191.1311-23C18.82
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.70
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.03
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.17
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B27.58
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C612.62
eyeball, embryo E14.CNhs10521.399-16E211.73
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D411.00
eyeball, neonate N00.CNhs11207.633-15C69.18
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G89.93
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E215.52
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E210.21
forelimb, embryo E14.CNhs10577.413-26A810.30
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I613.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C815.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.33
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.05
heart, embryo E11.CNhs10586.331-24E917.61
heart, embryo E12.CNhs11015.353-12F517.35
heart, embryo E13.CNhs11013.376-3I923.95
heart, embryo E14.CNhs10597.403-26D423.67
heart, embryo E15.CNhs11017.431-16C830.89
heart, embryo E16.CNhs11021.457-17C631.16
heart, embryo E17.CNhs11025.479-18E538.37
heart, embryo E18.CNhs11030.1283-20G332.19
heart, neonate N00.CNhs11213.639-21E331.53
heart, neonate N03.CNhs11221.1349-25I227.98
heart, neonate N10.CNhs11118.749-24G136.28
heart, neonate N16.CNhs11209.782-15G129.35
heart, neonate N20.CNhs11127.821-26I628.22
heart, neonate N25.CNhs11196.1351-25D323.93
heart, neonate N30.CNhs11202.1390-42D213.69
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A38.46
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D515.10
intestine, embryo E15.CNhs10602.976-16D812.37
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D310.67
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I918.02
kidney, embryo E15.CNhs10997.434-16F814.40
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C79.31
kidney, neonate N00.CNhs11214.646-21G77.50
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I18.86
kidney, neonate N25.CNhs11122.1353-25F38.95
kidney, neonate N30.CNhs11203.1385-42H110.49
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F816.35
liver, embryo E13.CNhs10524.378-3H617.10
liver, embryo E14.CNhs10594.409-16E113.49
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A37.64
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F412.81
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H19.51
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G216.30
lung, embryo E14.CNhs10604.404-26F811.57
lung, embryo E15.CNhs11020.432-17C515.96
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E56.94
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E65.26
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H24.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H211.31
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G611.38
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F414.57
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I78.30
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B617.70
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E612.96
pituitary gland, embryo E13.CNhs11009.370-44C711.25
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B911.53
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C315.50
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H311.34
skin, neonate N06.CNhs11097.693-20I511.58
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C98.53
spleen, adult.CNhs10465.25-2G210.59
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H115.04
spleen, neonate N25.CNhs11099.1354-25G312.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.98
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E316.92
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D510.66
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B811.60
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I17.00
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F512.86
testis, embryo E15.CNhs11034.443-27C515.72
testis, embryo E16.CNhs11033.470-26G515.56
testis, embryo E17.CNhs11029.486-18I512.92
testis, embryo E18.CNhs11027.503-18G515.21
testis, neonate N00.CNhs11189.1300-22B79.51
testis, neonate N07.CNhs11222.726-26I49.64
testis, neonate N10.CNhs11204.763-44D911.32
testis, neonate N20.CNhs11110.839-18H320.29
testis, neonate N30.CNhs11130.1391-42E225.35
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I418.65
thymus, embryo E15.CNhs11005.430-45I218.39
thymus, embryo E16.CNhs11002.456-26C518.32
thymus, embryo E17.CNhs10581.478-18C114.86
thymus, embryo E18.CNhs10595.1273-19G414.11
thymus, neonate N02.CNhs11181.1541-43F815.14
thymus, neonate N03.CNhs11137.2104-43C716.39
thymus, neonate N06.CNhs11197.681-26C416.05
thymus, neonate N07.CNhs11211.713-19D312.88
thymus, neonate N10.CNhs11194.748-24E414.12
thymus, neonate N20.CNhs11186.820-7A213.06
thymus, neonate N25.CNhs11125.1362-25G712.51
thymus, neonate N30.CNhs11132.1393-42G217.65
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H327.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F745.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G523.84
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I814.84
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H213.32
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B110.27
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm4.88e-10120
mesoderm-derived structure4.88e-10120
presumptive mesoderm4.88e-10120
hemopoietic organ1.39e-0829
immune organ1.39e-0829
lateral plate mesoderm3.91e-0887
primary circulatory organ7.12e-0818
heart7.12e-0818
primitive heart tube7.12e-0818
primary heart field7.12e-0818
anterior lateral plate mesoderm7.12e-0818
heart tube7.12e-0818
heart primordium7.12e-0818
cardiac mesoderm7.12e-0818
cardiogenic plate7.12e-0818
heart rudiment7.12e-0818
thymus1.06e-0723
neck1.06e-0723
respiratory system epithelium1.06e-0723
hemolymphoid system gland1.06e-0723
pharyngeal epithelium1.06e-0723
thymic region1.06e-0723
pharyngeal gland1.06e-0723
entire pharyngeal arch endoderm1.06e-0723
thymus primordium1.06e-0723
early pharyngeal endoderm1.06e-0723
segment of respiratory tract1.57e-0727
mixed endoderm/mesoderm-derived structure5.23e-0735
gland of gut5.74e-0724
pharynx7.13e-0724
upper respiratory tract7.13e-0724
chordate pharynx7.13e-0724
pharyngeal arch system7.13e-0724
pharyngeal region of foregut7.13e-0724
hematopoietic system8.46e-0745
blood island8.46e-0745
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