FFCP PHASE1:Mm9::chr1:195128164..195128184,+: Difference between revisions
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{{FFCP|EntrezGene=16780|HGNC=|MCL_coexpression_id=2302|UniProt=Q61087,Q8C5B3|association_with_transcript=-3bp_to_NM_008484,uc007eek.1_5end|description=CAGE_peak_2_at_Lamb3_5end|id=chr1:195128164..195128184,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002076,5.27e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!5.80e-22!130;UBERON:0000925!5.80e-22!130;UBERON:0006595!5.80e-22!130;UBERON:0001007!1.62e-21!128;UBERON:0001555!1.62e-21!128;UBERON:0007026!1.62e-21!128;UBERON:0004921!3.98e-20!126;UBERON:0004185!3.98e-20!126;UBERON:0000160!4.78e-15!43;UBERON:0005409!6.13e-15!59;UBERON:0005178!1.95e-11!17;UBERON:0005181!1.95e-11!17;UBERON:0002224!1.95e-11!17;UBERON:0000915!1.95e-11!17;UBERON:0008947!1.95e-11!17;UBERON:0003258!1.95e-11!17;UBERON:0005153!8.65e-11!17;UBERON:0000077!6.75e-10!97;UBERON:0002048!2.14e-09!14;UBERON:0000117!2.14e-09!14;UBERON:0000171!2.14e-09!14;UBERON:0000170!2.14e-09!14;UBERON:0005597!2.14e-09!14;UBERON:0000118!2.14e-09!14;UBERON:0000344!3.46e-09!15;UBERON:0001004!5.49e-09!42;UBERON:0000065!1.26e-08!41;UBERON:0001041!1.46e-08!92;UBERON:0001242!9.04e-08!13;UBERON:0000060!9.04e-08!13;UBERON:0001262!9.04e-08!13;UBERON:0004786!9.04e-08!13;UBERON:0000464!1.23e-07!57;UBERON:0002108!3.53e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.97e-19,118;UBERON:0000925,5.97e-19,118;UBERON:0006595,5.97e-19,118;UBERON:0001007,7.05e-19,116;UBERON:0001555,7.05e-19,116;UBERON:0007026,7.05e-19,116;UBERON:0004921,2.00e-17,114;UBERON:0005178,2.08e-13,17;UBERON:0005181,2.08e-13,17;UBERON:0002224,2.08e-13,17;UBERON:0000915,2.08e-13,17;UBERON:0008947,2.08e-13,17;UBERON:0003258,2.08e-13,17;UBERON:0005153,1.24e-12,17;UBERON:0001004,5.76e-12,42;UBERON:0000065,1.62e-11,41;UBERON:0005409,3.90e-11,47;UBERON:0002048,5.83e-11,14;UBERON:0000117,5.83e-11,14;UBERON:0000171,5.83e-11,14;UBERON:0000170,5.83e-11,14;UBERON:0005597,5.83e-11,14;UBERON:0000118,5.83e-11,14;UBERON:0000344,1.03e-10,15;UBERON:0000160,2.86e-10,31;UBERON:0005157,1.30e-09,20;UBERON:0001242,5.15e-09,13;UBERON:0001262,5.15e-09,13;UBERON:0004786,5.15e-09,13;UBERON:0005911,5.72e-07,69;UBERON:0001041,8.63e-07,80|phase1_expression=0.160148847104794,84.4520486487254,90.5448486385177,3.32710632437513,3.50627010962443,20.3133919013387,20.7915250130018,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,44.4778935365671,41.9818984352921,42.4931653445115,40.9223896351121,39.0002931161459,19.1923653650938,4.03248207615889,18.4036323843903,0,0,0,6.64358725427932,5.65197794218874,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,3.76823835312181,0,0,0,0,0,1.40444420131752,0,0,0,2.25349471642689,1.28326477414318,0,0,24.6799786752784,38.7640594176901,36.3977600410644,1.59857431606684,0,0.148442139064825,0.346970653532272,0.608930956624282,0,0.301445281105245,0.117588707135705,0,99.1251820614839,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0.20778804455956,0,0.407357455401265,1.24406970610093,3.79084137650512,2.73574412652416,0.130120442962704,0.689706313300419,0.540186389416048,0,0.204109497453984,0.512454881139399,0.655912071918102,2.06962696591213,1.07783996466421,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,1.64625709126355,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,1.18372367792605,0.393528463494808,0.771335564436891,0,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,0,0,15.1992640172547,13.7514294665043,0.426576501070468,0.928946687441754,1.15980715189884,0.403367049246685,0.667134131534611,1.71203063501303,3.79623249235609,1.64698954724011,2.26201687920243,3.18330355265841,3.11942539390592,6.29173586057955,4.75503709724327,9.16049856970089,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,2.21415221969403,1.09899109488962,0.616985819609003,0.296452627087149,0,0,0,0.202860121388503,0.72353147925725,1.2731292589071,1.72617682470486,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0.482443521363367,27.7129785249907,2.08440552947533,8.63714375142737,10.0149600607361,15.7242466353296,27.9735449927832,29.0413241880937,20.2938993772111,22.0689201748667,22.589398344175,24.3965796045955,19.6635977658886,27.1115421529456,27.9172683062317,0,0,16.2282210096282,19.591508987636,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,1.06839362200353,1.62886959353576,1.64970122972535,9.2921596837974,0.728341908464944,0.604647113929502,2.45186603682668,6.79194353625777,6.7635732547664,6.20227903603731,6.18007340111759,7.48644494607915,10.7452497698177,18.9753495434998,19.5957532171555,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,4.44847348814022,3.52845436887939,5.93590510589328,5.9741837877485,3.07595917133595,3.34242563208782,4.10352249362653,3.20628920292836,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,6.68269432610579,1.58167996790568,2.43983360552218,2.70013352054503,5.85447228840512,6.33251434863915,9.97996163247673,11.4888303458217,11.7790173892813,12.0541925161367,4.97071450469541,0,0,0,0.777804753376191,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,5.05617793005085,4.05450430580328,3.90301637226344,3.63778304337826,4.11761400035207,3.57626438606277,3.4856680360791,3.2491695978407,1.71642964911851,3.04827226619999,1.61321896218945,3.60594158737084,2.50150788264857,3.3894301632655,2.72076460338254,0.443971906748129,0,0,15.261977928543,1.87682475451182,6.77661009788881,6.21668299329291,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.682934423016537,1.21553358534147,0,0.367687016900028,2.00022055021454,2.06035057238894,2.24643446714271,1.76888048234658,1.52087579934144,0.943131706930381,1.591905626988,2.04880487695582,2.12511235135769,3.81034953026459,2.0859178670074,0.964546102318525,0,1.32479028120958,2.74295401908332,1.95223386775271,2.38436189947321,2.61623549938191,2.25862512996793,1.18460451048347,2.19513567447327,1.57841826862706,1.62964936615034,2.24456908663095,2.96587545310435,1.77308068276014,2.86461730218783,1.70430525304563,2.50778594275484,2.24829520144151,3.74290573512653,1.93383948643468,0.382576664137687,1.10295709559758,0.463735671240843|short_description=p2@Lamb3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16780 | |||
|HGNC= | |||
|MCL_coexpression_id=2302 | |||
|TSSclassifier=NA | |||
|UniProt=Q61087,Q8C5B3 | |||
|association_with_transcript=-3bp_to_NM_008484,uc007eek.1_5end | |||
|cluster_id=chr1:195128164..195128184,+ | |||
|description=CAGE_peak_2_at_Lamb3_5end | |||
|id=chr1:195128164..195128184,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.27e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.80e-22!130;UBERON:0000925!5.80e-22!130;UBERON:0006595!5.80e-22!130;UBERON:0001007!1.62e-21!128;UBERON:0001555!1.62e-21!128;UBERON:0007026!1.62e-21!128;UBERON:0004921!3.98e-20!126;UBERON:0004185!3.98e-20!126;UBERON:0000160!4.78e-15!43;UBERON:0005409!6.13e-15!59;UBERON:0005178!1.95e-11!17;UBERON:0005181!1.95e-11!17;UBERON:0002224!1.95e-11!17;UBERON:0000915!1.95e-11!17;UBERON:0008947!1.95e-11!17;UBERON:0003258!1.95e-11!17;UBERON:0005153!8.65e-11!17;UBERON:0000077!6.75e-10!97;UBERON:0002048!2.14e-09!14;UBERON:0000117!2.14e-09!14;UBERON:0000171!2.14e-09!14;UBERON:0000170!2.14e-09!14;UBERON:0005597!2.14e-09!14;UBERON:0000118!2.14e-09!14;UBERON:0000344!3.46e-09!15;UBERON:0001004!5.49e-09!42;UBERON:0000065!1.26e-08!41;UBERON:0001041!1.46e-08!92;UBERON:0001242!9.04e-08!13;UBERON:0000060!9.04e-08!13;UBERON:0001262!9.04e-08!13;UBERON:0004786!9.04e-08!13;UBERON:0000464!1.23e-07!57;UBERON:0002108!3.53e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.97e-19,118;UBERON:0000925,5.97e-19,118;UBERON:0006595,5.97e-19,118;UBERON:0001007,7.05e-19,116;UBERON:0001555,7.05e-19,116;UBERON:0007026,7.05e-19,116;UBERON:0004921,2.00e-17,114;UBERON:0005178,2.08e-13,17;UBERON:0005181,2.08e-13,17;UBERON:0002224,2.08e-13,17;UBERON:0000915,2.08e-13,17;UBERON:0008947,2.08e-13,17;UBERON:0003258,2.08e-13,17;UBERON:0005153,1.24e-12,17;UBERON:0001004,5.76e-12,42;UBERON:0000065,1.62e-11,41;UBERON:0005409,3.90e-11,47;UBERON:0002048,5.83e-11,14;UBERON:0000117,5.83e-11,14;UBERON:0000171,5.83e-11,14;UBERON:0000170,5.83e-11,14;UBERON:0005597,5.83e-11,14;UBERON:0000118,5.83e-11,14;UBERON:0000344,1.03e-10,15;UBERON:0000160,2.86e-10,31;UBERON:0005157,1.30e-09,20;UBERON:0001242,5.15e-09,13;UBERON:0001262,5.15e-09,13;UBERON:0004786,5.15e-09,13;UBERON:0005911,5.72e-07,69;UBERON:0001041,8.63e-07,80 | |||
|phase1_expression=0.160148847104794,84.4520486487254,90.5448486385177,3.32710632437513,3.50627010962443,20.3133919013387,20.7915250130018,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,44.4778935365671,41.9818984352921,42.4931653445115,40.9223896351121,39.0002931161459,19.1923653650938,4.03248207615889,18.4036323843903,0,0,0,6.64358725427932,5.65197794218874,6.12508068787107,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,3.76823835312181,0,0,0,0,0,1.40444420131752,0,0,0,2.25349471642689,1.28326477414318,0,0,24.6799786752784,38.7640594176901,36.3977600410644,1.59857431606684,0,0.148442139064825,0.346970653532272,0.608930956624282,0,0.301445281105245,0.117588707135705,0,99.1251820614839,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0.20778804455956,0,0.407357455401265,1.24406970610093,3.79084137650512,2.73574412652416,0.130120442962704,0.689706313300419,0.540186389416048,0,0.204109497453984,0.512454881139399,0.655912071918102,2.06962696591213,1.07783996466421,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0.696504333044333,1.64625709126355,0,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,1.18372367792605,0.393528463494808,0.771335564436891,0,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0,0,0,0.134206418760372,0,0,15.1992640172547,13.7514294665043,0.426576501070468,0.928946687441754,1.15980715189884,0.403367049246685,0.667134131534611,1.71203063501303,3.79623249235609,1.64698954724011,2.26201687920243,3.18330355265841,3.11942539390592,6.29173586057955,4.75503709724327,9.16049856970089,0.189667900953082,0.571242563048644,0,0.407302655690628,0.387904974335251,0.49095073923223,0.758838445491087,2.21415221969403,1.09899109488962,0.616985819609003,0.296452627087149,0,0,0,0.202860121388503,0.72353147925725,1.2731292589071,1.72617682470486,0.162135226775035,0,0,0.744281895337007,0,0.252578877947112,0.179397413521912,0.482443521363367,27.7129785249907,2.08440552947533,8.63714375142737,10.0149600607361,15.7242466353296,27.9735449927832,29.0413241880937,20.2938993772111,22.0689201748667,22.589398344175,24.3965796045955,19.6635977658886,27.1115421529456,27.9172683062317,0,0,16.2282210096282,19.591508987636,0,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,1.06839362200353,1.62886959353576,1.64970122972535,9.2921596837974,0.728341908464944,0.604647113929502,2.45186603682668,6.79194353625777,6.7635732547664,6.20227903603731,6.18007340111759,7.48644494607915,10.7452497698177,18.9753495434998,19.5957532171555,0.680879211507576,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0.608929898229199,0.469343416127421,4.44847348814022,3.52845436887939,5.93590510589328,5.9741837877485,3.07595917133595,3.34242563208782,4.10352249362653,3.20628920292836,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,6.68269432610579,1.58167996790568,2.43983360552218,2.70013352054503,5.85447228840512,6.33251434863915,9.97996163247673,11.4888303458217,11.7790173892813,12.0541925161367,4.97071450469541,0,0,0,0.777804753376191,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,5.05617793005085,4.05450430580328,3.90301637226344,3.63778304337826,4.11761400035207,3.57626438606277,3.4856680360791,3.2491695978407,1.71642964911851,3.04827226619999,1.61321896218945,3.60594158737084,2.50150788264857,3.3894301632655,2.72076460338254,0.443971906748129,0,0,15.261977928543,1.87682475451182,6.77661009788881,6.21668299329291,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.682934423016537,1.21553358534147,0,0.367687016900028,2.00022055021454,2.06035057238894,2.24643446714271,1.76888048234658,1.52087579934144,0.943131706930381,1.591905626988,2.04880487695582,2.12511235135769,3.81034953026459,2.0859178670074,0.964546102318525,0,1.32479028120958,2.74295401908332,1.95223386775271,2.38436189947321,2.61623549938191,2.25862512996793,1.18460451048347,2.19513567447327,1.57841826862706,1.62964936615034,2.24456908663095,2.96587545310435,1.77308068276014,2.86461730218783,1.70430525304563,2.50778594275484,2.24829520144151,3.74290573512653,1.93383948643468,0.382576664137687,1.10295709559758,0.463735671240843 | |||
|short_description=p2@Lamb3 | |||
}} |
Latest revision as of 00:40, 27 September 2015
Short description: | p2@Lamb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lamb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2302 |
Association with transcript: | -3bp_to_NM_008484, uc007eek.1_5end |
EntrezGene: | Lamb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.27e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.97e-19 | 118 |
endoderm | 5.97e-19 | 118 |
presumptive endoderm | 5.97e-19 | 118 |
digestive system | 7.05e-19 | 116 |
digestive tract | 7.05e-19 | 116 |
primitive gut | 7.05e-19 | 116 |
subdivision of digestive tract | 2.00e-17 | 114 |
thoracic cavity element | 2.08e-13 | 17 |
thoracic segment organ | 2.08e-13 | 17 |
thoracic cavity | 2.08e-13 | 17 |
thoracic segment of trunk | 2.08e-13 | 17 |
respiratory primordium | 2.08e-13 | 17 |
endoderm of foregut | 2.08e-13 | 17 |
epithelial bud | 1.24e-12 | 17 |
respiratory system | 5.76e-12 | 42 |
respiratory tract | 1.62e-11 | 41 |
gastrointestinal system | 3.90e-11 | 47 |
lung | 5.83e-11 | 14 |
respiratory tube | 5.83e-11 | 14 |
respiration organ | 5.83e-11 | 14 |
pair of lungs | 5.83e-11 | 14 |
lung primordium | 5.83e-11 | 14 |
lung bud | 5.83e-11 | 14 |
mucosa | 1.03e-10 | 15 |
intestine | 2.86e-10 | 31 |
epithelial fold | 1.30e-09 | 20 |
intestinal mucosa | 5.15e-09 | 13 |
wall of intestine | 5.15e-09 | 13 |
gastrointestinal system mucosa | 5.15e-09 | 13 |
endo-epithelium | 5.72e-07 | 69 |
foregut | 8.63e-07 | 80 |