FFCP PHASE1:Mm9::chr12:99812784..99812796,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:99812784..99812796,-
|short_description=p3@Kcnk10
|description=CAGE_peak_3_at_Kcnk10_5end
|association_with_transcript=125bp_to_ENSMUST00000166918,uc007oq...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72258 | |EntrezGene=72258 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q8H0,Q3LS20 | |UniProt=E9Q8H0,Q3LS20 | ||
|association_with_transcript=125bp_to_ENSMUST00000166918,uc007oqg.1_5end | |||
|cluster_id=chr12:99812784..99812796,- | |||
|description=CAGE_peak_3_at_Kcnk10_5end | |||
|id=chr12:99812784..99812796,- | |||
|ontology_enrichment_celltype=CL:0000117!2.93e-15!23;CL:0000337!2.93e-15!23;CL:0000540!5.28e-10!33;CL:0000047!5.28e-10!33;CL:0000031!5.28e-10!33;CL:0000404!5.28e-10!33;CL:0002319!8.89e-09!43;CL:0000221!2.16e-08!44;CL:0000133!2.16e-08!44;CL:0002609!1.88e-07!6;CL:0000393!2.42e-07!39;CL:0000211!2.42e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-32,23;CL:0000337,7.67e-32,23;CL:0000540,4.12e-21,33;CL:0000047,4.12e-21,33;CL:0000031,4.12e-21,33;CL:0000404,4.12e-21,33;CL:0002609,3.29e-18,6;CL:0000393,2.58e-17,39;CL:0000211,2.58e-17,39;CL:0002319,2.26e-15,43;CL:0000221,6.09e-15,44;CL:0000133,6.09e-15,44;CL:0002613,1.08e-10,3;CL:0000120,3.56e-10,3;CL:0002608,7.08e-10,3;CL:0002612,7.08e-10,3;CL:0002321,4.32e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.25e-18!71;UBERON:0003075!2.25e-18!71;UBERON:0007284!2.25e-18!71;UBERON:0002020!4.12e-16!34;UBERON:0004121!8.87e-14!102;UBERON:0000924!8.87e-14!102;UBERON:0006601!8.87e-14!102;UBERON:0003056!9.76e-14!49;UBERON:0000033!1.05e-12!63;UBERON:0001049!1.06e-12!52;UBERON:0005068!1.06e-12!52;UBERON:0006241!1.06e-12!52;UBERON:0007135!1.06e-12!52;UBERON:0002791!6.68e-12!29;UBERON:0003528!6.68e-12!29;UBERON:0001893!6.68e-12!29;UBERON:0001017!1.20e-11!73;UBERON:0005743!1.20e-11!73;UBERON:0000073!1.44e-11!75;UBERON:0001016!1.44e-11!75;UBERON:0002616!6.73e-10!49;UBERON:0002780!6.92e-10!39;UBERON:0001890!6.92e-10!39;UBERON:0006240!6.92e-10!39;UBERON:0000955!1.65e-09!50;UBERON:0006238!1.65e-09!50;UBERON:0003080!1.97e-09!40;UBERON:0000956!5.68e-09!21;UBERON:0001869!5.68e-09!21;UBERON:0000203!5.68e-09!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.90e-22,34;UBERON:0002346,3.22e-16,64;UBERON:0003075,3.22e-16,64;UBERON:0007284,3.22e-16,64;UBERON:0003528,3.39e-15,29;UBERON:0002791,3.39e-15,29;UBERON:0001893,3.39e-15,29;UBERON:0001049,4.50e-15,52;UBERON:0005068,4.50e-15,52;UBERON:0006241,4.50e-15,52;UBERON:0007135,4.50e-15,52;UBERON:0000073,2.27e-14,54;UBERON:0001017,4.56e-14,73;UBERON:0010371,1.15e-13,73;UBERON:0001016,1.43e-13,75;UBERON:0004121,1.94e-13,95;UBERON:0000924,1.94e-13,95;UBERON:0006601,1.94e-13,95;UBERON:0003056,2.90e-12,49;UBERON:0002780,1.34e-10,39;UBERON:0001890,1.34e-10,39;UBERON:0006240,1.34e-10,39;UBERON:0000369,1.49e-10,5;UBERON:0002435,1.49e-10,5;UBERON:0000204,1.49e-10,5;UBERON:0010082,1.49e-10,5;UBERON:0003080,2.89e-10,40;UBERON:0000956,5.04e-10,21;UBERON:0001869,5.04e-10,21;UBERON:0000203,5.04e-10,21;UBERON:0001948,5.47e-10,5;UBERON:0002315,5.47e-10,5;UBERON:0002616,5.69e-10,46;UBERON:0010314,6.41e-10,92;UBERON:0002257,7.08e-10,3;UBERON:0000955,1.07e-09,47;UBERON:0006238,1.07e-09,47;UBERON:0002240,2.51e-08,6;UBERON:0005174,2.51e-08,6;UBERON:0001137,2.51e-08,6;UBERON:0001954,4.68e-07,7;UBERON:0003022,4.68e-07,7;UBERON:0002421,4.68e-07,7;UBERON:0000349,4.68e-07,7;UBERON:0002600,4.68e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,4.45096213891115,5.28990979272033,5.07065122804943,0,0,0,0,0,0.599200221036809,0,3.62913643079672,4.59020190327748,4.6271491497304,2.85650984403804,0.662605622854841,3.30725157880376,2.97120960156533,7.35375029288017,0,0.383062014255563,0.153606533256243,9.75958529203434,11.0700048758916,10.4182674111352,0,0,0.15279824777681,4.41942878210502,2.70506193518296,5.59198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0.390361328888111,1.14951052216736,1.44049703844279,0.90422890701429,1.15662048557257,0.896796041993948,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.64647379806855,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0.830298780673413,3.99024873401031,1.36586884603307,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.565879024158229,0.561849044819294,0.704276676453562,0.574354689556133,0,0.579421629724277,0.77163688185482,0,0.441596760403192,0,1.06485483695602,0.953744759789284,0.436039249896986,0.658765662907314,1.09998990259179,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,0.464810523557898,0.385813221962283,2.49810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0,0,0,4.45096213891115,5.28990979272033,5.07065122804943,0,0,0,0,0,0.599200221036809,0,3.62913643079672,4.59020190327748,4.6271491497304,2.85650984403804,0.662605622854841,3.30725157880376,2.97120960156533,7.35375029288017,0,0.383062014255563,0.153606533256243,9.75958529203434,11.0700048758916,10.4182674111352,0,0,0.15279824777681,4.41942878210502,2.70506193518296,5.59198337475902,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.705532242814229,0,0,0,0,0,0,0,0,0.585561594023094,1.04723353406728,0,0.11981512450592,0,0,0,0.457500602818626,1.7591609295801,0.173824320192276,0.511430914660661,0,0,0,0,0,0,0.390361328888111,1.14951052216736,1.44049703844279,0.90422890701429,1.15662048557257,0.896796041993948,0.655912071918102,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,1.64647379806855,0,0,0,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,0.830298780673413,3.99024873401031,1.36586884603307,0.243106717068294,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,1.26348605881899,1.01391719956096,0.565879024158229,0.561849044819294,0.704276676453562,0.574354689556133,0,0.579421629724277,0.77163688185482,0,0.441596760403192,0,1.06485483695602,0.953744759789284,0.436039249896986,0.658765662907314,1.09998990259179,0.548783918618318,0.526139422875686,0.543216455383447,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,0.464810523557898,0.385813221962283,2.49810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p3@Kcnk10 | |||
}} | }} |
Latest revision as of 00:29, 27 September 2015
Short description: | p3@Kcnk10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Kcnk10_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 125bp_to_ENSMUST00000166918, uc007oqg.1_5end |
EntrezGene: | Kcnk10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.67e-32 | 23 |
neuroblast (sensu Vertebrata) | 7.67e-32 | 23 |
neuron | 4.12e-21 | 33 |
neuronal stem cell | 4.12e-21 | 33 |
neuroblast | 4.12e-21 | 33 |
electrically signaling cell | 4.12e-21 | 33 |
neuron of cerebral cortex | 3.29e-18 | 6 |
electrically responsive cell | 2.58e-17 | 39 |
electrically active cell | 2.58e-17 | 39 |
neural cell | 2.26e-15 | 43 |
ectodermal cell | 6.09e-15 | 44 |
neurectodermal cell | 6.09e-15 | 44 |
striatum neuron | 1.08e-10 | 3 |
granule cell | 3.56e-10 | 3 |
hippocampal neuron | 7.08e-10 | 3 |
neuron of the ventral spinal cord | 7.08e-10 | 3 |
embryonic cell | 4.32e-08 | 70 |