FFCP PHASE1:Mm9::chr17:86020357..86020366,+: Difference between revisions
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{{FFCP|EntrezGene=20473|HGNC=|MCL_coexpression_id=492|UniProt=Q52KB8|association_with_transcript=-4bp_to_ENSMUST00000043819,ENSMUST00000162695_5end|description=CAGE_peak_11_at_Six3_5end|id=chr17:86020357..86020366,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.35e-27!49;UBERON:0000033!5.10e-25!63;UBERON:0001894!7.03e-22!10;UBERON:0006222!7.03e-22!10;UBERON:0002346!2.94e-18!71;UBERON:0003075!2.94e-18!71;UBERON:0007284!2.94e-18!71;UBERON:0002616!5.43e-18!49;UBERON:0000007!6.57e-18!8;UBERON:0003296!6.57e-18!8;UBERON:0010133!6.57e-18!8;UBERON:0000955!1.63e-17!50;UBERON:0006238!1.63e-17!50;UBERON:0003080!2.74e-17!40;UBERON:0007811!2.48e-16!86;UBERON:0002780!7.70e-16!39;UBERON:0001890!7.70e-16!39;UBERON:0006240!7.70e-16!39;UBERON:0000153!2.59e-14!94;UBERON:0004121!9.49e-14!102;UBERON:0000924!9.49e-14!102;UBERON:0006601!9.49e-14!102;UBERON:0001049!1.39e-13!52;UBERON:0005068!1.39e-13!52;UBERON:0006241!1.39e-13!52;UBERON:0007135!1.39e-13!52;UBERON:0000970!3.74e-12!9;UBERON:0000019!3.74e-12!9;UBERON:0000047!3.74e-12!9;UBERON:0004088!3.74e-12!9;UBERON:0002104!3.74e-12!9;UBERON:0001456!3.74e-12!9;UBERON:0003072!3.74e-12!9;UBERON:0003071!3.74e-12!9;UBERON:0004128!3.74e-12!9;UBERON:0001017!2.47e-11!73;UBERON:0005743!2.47e-11!73;UBERON:0000073!7.11e-11!75;UBERON:0001016!7.11e-11!75;UBERON:0001444!1.03e-09!11;UBERON:0000020!8.44e-09!12;UBERON:0001032!8.44e-09!12;UBERON:0004456!8.44e-09!12;UBERON:0005085!5.00e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.98e-27,8;UBERON:0003296,2.98e-27,8;UBERON:0010133,2.98e-27,8;UBERON:0001894,7.43e-22,10;UBERON:0006222,7.43e-22,10;UBERON:0003056,1.81e-17,49;UBERON:0000970,2.47e-16,9;UBERON:0000019,2.47e-16,9;UBERON:0000047,2.47e-16,9;UBERON:0010312,2.47e-16,9;UBERON:0004088,2.47e-16,9;UBERON:0002104,2.47e-16,9;UBERON:0001456,2.47e-16,9;UBERON:0003072,2.47e-16,9;UBERON:0004128,2.47e-16,9;UBERON:0003071,2.47e-16,9;UBERON:0001444,1.96e-13,11;UBERON:0002346,2.86e-13,64;UBERON:0003075,2.86e-13,64;UBERON:0007284,2.86e-13,64;UBERON:0000020,2.40e-12,12;UBERON:0001032,2.40e-12,12;UBERON:0004456,2.40e-12,12;UBERON:0010371,1.42e-11,73;UBERON:0000033,2.01e-11,13;UBERON:0005085,2.01e-11,13;UBERON:0010314,4.56e-09,92;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002780,6.78e-08,39;UBERON:0001890,6.78e-08,39;UBERON:0006240,6.78e-08,39;UBERON:0003080,1.08e-07,40|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,1.00523481690292,0.173824320192276,0,0.41557608911912,0.811206315338788,0,0,0,0,1.17108398666433,0.229902104433473,1.26043490863744,0,2.51735046859913,1.40925092313335,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.08036656418786,1.03486947026204,1.28602221018955,0.709360934569094,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p11@Six3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20473 | |||
|HGNC= | |||
|MCL_coexpression_id=492 | |||
|TSSclassifier=NA | |||
|UniProt=Q52KB8 | |||
|association_with_transcript=-4bp_to_ENSMUST00000043819,ENSMUST00000162695_5end | |||
|cluster_id=chr17:86020357..86020366,+ | |||
|description=CAGE_peak_11_at_Six3_5end | |||
|id=chr17:86020357..86020366,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.35e-27!49;UBERON:0000033!5.10e-25!63;UBERON:0001894!7.03e-22!10;UBERON:0006222!7.03e-22!10;UBERON:0002346!2.94e-18!71;UBERON:0003075!2.94e-18!71;UBERON:0007284!2.94e-18!71;UBERON:0002616!5.43e-18!49;UBERON:0000007!6.57e-18!8;UBERON:0003296!6.57e-18!8;UBERON:0010133!6.57e-18!8;UBERON:0000955!1.63e-17!50;UBERON:0006238!1.63e-17!50;UBERON:0003080!2.74e-17!40;UBERON:0007811!2.48e-16!86;UBERON:0002780!7.70e-16!39;UBERON:0001890!7.70e-16!39;UBERON:0006240!7.70e-16!39;UBERON:0000153!2.59e-14!94;UBERON:0004121!9.49e-14!102;UBERON:0000924!9.49e-14!102;UBERON:0006601!9.49e-14!102;UBERON:0001049!1.39e-13!52;UBERON:0005068!1.39e-13!52;UBERON:0006241!1.39e-13!52;UBERON:0007135!1.39e-13!52;UBERON:0000970!3.74e-12!9;UBERON:0000019!3.74e-12!9;UBERON:0000047!3.74e-12!9;UBERON:0004088!3.74e-12!9;UBERON:0002104!3.74e-12!9;UBERON:0001456!3.74e-12!9;UBERON:0003072!3.74e-12!9;UBERON:0003071!3.74e-12!9;UBERON:0004128!3.74e-12!9;UBERON:0001017!2.47e-11!73;UBERON:0005743!2.47e-11!73;UBERON:0000073!7.11e-11!75;UBERON:0001016!7.11e-11!75;UBERON:0001444!1.03e-09!11;UBERON:0000020!8.44e-09!12;UBERON:0001032!8.44e-09!12;UBERON:0004456!8.44e-09!12;UBERON:0005085!5.00e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.98e-27,8;UBERON:0003296,2.98e-27,8;UBERON:0010133,2.98e-27,8;UBERON:0001894,7.43e-22,10;UBERON:0006222,7.43e-22,10;UBERON:0003056,1.81e-17,49;UBERON:0000970,2.47e-16,9;UBERON:0000019,2.47e-16,9;UBERON:0000047,2.47e-16,9;UBERON:0010312,2.47e-16,9;UBERON:0004088,2.47e-16,9;UBERON:0002104,2.47e-16,9;UBERON:0001456,2.47e-16,9;UBERON:0003072,2.47e-16,9;UBERON:0004128,2.47e-16,9;UBERON:0003071,2.47e-16,9;UBERON:0001444,1.96e-13,11;UBERON:0002346,2.86e-13,64;UBERON:0003075,2.86e-13,64;UBERON:0007284,2.86e-13,64;UBERON:0000020,2.40e-12,12;UBERON:0001032,2.40e-12,12;UBERON:0004456,2.40e-12,12;UBERON:0010371,1.42e-11,73;UBERON:0000033,2.01e-11,13;UBERON:0005085,2.01e-11,13;UBERON:0010314,4.56e-09,92;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002780,6.78e-08,39;UBERON:0001890,6.78e-08,39;UBERON:0006240,6.78e-08,39;UBERON:0003080,1.08e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367472397644862,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,1.00523481690292,0.173824320192276,0,0.41557608911912,0.811206315338788,0,0,0,0,1.17108398666433,0.229902104433473,1.26043490863744,0,2.51735046859913,1.40925092313335,0.843315521037559,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.08036656418786,1.03486947026204,1.28602221018955,0.709360934569094,0.356737635204141,0.329098041204242,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p11@Six3 | |||
}} |
Latest revision as of 23:40, 26 September 2015
Short description: | p11@Six3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Six3_5end |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | -4bp_to_ENSMUST00000043819, ENSMUST00000162695_5end |
EntrezGene: | Six3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.98e-27 | 8 |
gland of diencephalon | 2.98e-27 | 8 |
neuroendocrine gland | 2.98e-27 | 8 |
diencephalon | 7.43e-22 | 10 |
future diencephalon | 7.43e-22 | 10 |
pre-chordal neural plate | 1.81e-17 | 49 |
eye | 2.47e-16 | 9 |
camera-type eye | 2.47e-16 | 9 |
simple eye | 2.47e-16 | 9 |
immature eye | 2.47e-16 | 9 |
ocular region | 2.47e-16 | 9 |
visual system | 2.47e-16 | 9 |
face | 2.47e-16 | 9 |
optic cup | 2.47e-16 | 9 |
optic vesicle | 2.47e-16 | 9 |
eye primordium | 2.47e-16 | 9 |
subdivision of head | 1.96e-13 | 11 |
neurectoderm | 2.86e-13 | 64 |
neural plate | 2.86e-13 | 64 |
presumptive neural plate | 2.86e-13 | 64 |
sense organ | 2.40e-12 | 12 |
sensory system | 2.40e-12 | 12 |
entire sense organ system | 2.40e-12 | 12 |
ecto-epithelium | 1.42e-11 | 73 |
head | 2.01e-11 | 13 |
ectodermal placode | 2.01e-11 | 13 |
structure with developmental contribution from neural crest | 4.56e-09 | 92 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
regional part of forebrain | 6.78e-08 | 39 |
forebrain | 6.78e-08 | 39 |
future forebrain | 6.78e-08 | 39 |
anterior neural tube | 1.08e-07 | 40 |