FFCP PHASE1:Mm9::chr9:57927165..57927189,+: Difference between revisions
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{{FFCP|EntrezGene=20897|HGNC=|MCL_coexpression_id=31|UniProt=D3YVZ1|association_with_transcript=-2bp_to_ENSMUST00000128021_5end|description=CAGE_peak_7_at_Stra6_5end|id=chr9:57927165..57927189,+|ontology_enrichment_celltype=CL:0000349!2.10e-37!3;CL:0000351!2.10e-37!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.88e-08,3;CL:0000351,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.17e-38!3;UBERON:0000478!1.17e-38!3;UBERON:0000158!1.17e-38!3;UBERON:0000358!2.10e-37!3;UBERON:0000307!2.10e-37!3;UBERON:0005795!6.00e-29!4;UBERON:0000995!6.00e-29!4;UBERON:0001987!1.78e-26!2;UBERON:0003124!1.78e-26!2;UBERON:0004340!1.78e-26!2;UBERON:0003975!2.45e-23!5;UBERON:0003134!6.82e-15!8;UBERON:0000305!6.50e-14!1;UBERON:0006834!1.55e-13!1;UBERON:0004175!2.54e-13!9;UBERON:0000474!2.54e-13!9;UBERON:0003100!4.96e-11!11|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0001987,1.66e-44,2;UBERON:0003124,1.66e-44,2;UBERON:0004340,1.66e-44,2;UBERON:0005795,6.55e-23,4;UBERON:0000995,6.55e-23,4;UBERON:0000305,8.39e-23,1;UBERON:0003975,1.42e-18,5;UBERON:0003134,4.89e-12,8;UBERON:0004175,8.07e-11,9;UBERON:0000474,8.07e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0003100,4.82e-09,11;UBERON:0004871,1.59e-08,3;UBERON:0000358,1.88e-08,3;UBERON:0000307,1.88e-08,3;UBERON:0007010,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1817668934791,84.7328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,1.17519231454855,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Stra6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20897 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt=D3YVZ1 | |||
|association_with_transcript=-2bp_to_ENSMUST00000128021_5end | |||
|cluster_id=chr9:57927165..57927189,+ | |||
|description=CAGE_peak_7_at_Stra6_5end | |||
|id=chr9:57927165..57927189,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.10e-37!3;CL:0000351!2.10e-37!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.88e-08,3;CL:0000351,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.17e-38!3;UBERON:0000478!1.17e-38!3;UBERON:0000158!1.17e-38!3;UBERON:0000358!2.10e-37!3;UBERON:0000307!2.10e-37!3;UBERON:0005795!6.00e-29!4;UBERON:0000995!6.00e-29!4;UBERON:0001987!1.78e-26!2;UBERON:0003124!1.78e-26!2;UBERON:0004340!1.78e-26!2;UBERON:0003975!2.45e-23!5;UBERON:0003134!6.82e-15!8;UBERON:0000305!6.50e-14!1;UBERON:0006834!1.55e-13!1;UBERON:0004175!2.54e-13!9;UBERON:0000474!2.54e-13!9;UBERON:0003100!4.96e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-65,3;UBERON:0000478,1.33e-65,3;UBERON:0000158,1.33e-65,3;UBERON:0001987,1.66e-44,2;UBERON:0003124,1.66e-44,2;UBERON:0004340,1.66e-44,2;UBERON:0005795,6.55e-23,4;UBERON:0000995,6.55e-23,4;UBERON:0000305,8.39e-23,1;UBERON:0003975,1.42e-18,5;UBERON:0003134,4.89e-12,8;UBERON:0004175,8.07e-11,9;UBERON:0000474,8.07e-11,9;UBERON:0004923,4.35e-09,24;UBERON:0003100,4.82e-09,11;UBERON:0004871,1.59e-08,3;UBERON:0000358,1.88e-08,3;UBERON:0000307,1.88e-08,3;UBERON:0007010,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1817668934791,84.7328283455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.665957860122194,0.179427713218951,1.17519231454855,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Stra6 | |||
}} |
Latest revision as of 21:51, 26 September 2015
Short description: | p7@Stra6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Stra6_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | -2bp_to_ENSMUST00000128021_5end |
EntrezGene: | Stra6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.88e-08 | 3 |
trophoblast cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-65 | 3 |
extraembryonic structure | 1.33e-65 | 3 |
membranous layer | 1.33e-65 | 3 |
placenta | 1.66e-44 | 2 |
chorion | 1.66e-44 | 2 |
allantois | 1.66e-44 | 2 |
embryonic uterus | 6.55e-23 | 4 |
uterus | 6.55e-23 | 4 |
amnion | 8.39e-23 | 1 |
internal female genitalia | 1.42e-18 | 5 |
female reproductive organ | 4.89e-12 | 8 |
internal genitalia | 8.07e-11 | 9 |
female reproductive system | 8.07e-11 | 9 |
organ component layer | 4.35e-09 | 24 |
female organism | 4.82e-09 | 11 |
somatic layer of lateral plate mesoderm | 1.59e-08 | 3 |
blastocyst | 1.88e-08 | 3 |
blastula | 1.88e-08 | 3 |
cleaving embryo | 1.88e-08 | 3 |