FFCP PHASE1:Mm9::chr9:57181873..57181884,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330948 | |EntrezGene=330948 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1129 | |||
|TSSclassifier=NA | |||
|UniProt=D3YW44 | |UniProt=D3YW44 | ||
|association_with_transcript=-35bp_to_ENSMUST00000085711_5end | |association_with_transcript=-35bp_to_ENSMUST00000085711_5end | ||
|cluster_id=chr9:57181873..57181884,+ | |||
|description=CAGE_peak_1_at_Gm5121_5end | |description=CAGE_peak_1_at_Gm5121_5end | ||
|id=chr9:57181873..57181884,+ | |id=chr9:57181873..57181884,+ | ||
|ontology_enrichment_celltype=CL:0000063!6.38e-15!66;CL:0000144!1.58e-11!121;CL:0000012!1.58e-11!121;CL:0002371!3.24e-10!118;CL:0000988!4.53e-10!32;CL:0002032!4.53e-10!32;CL:0000037!4.53e-10!32;CL:0000566!4.53e-10!32;CL:0000837!4.53e-10!32;CL:0000548!4.54e-10!115;CL:0000004!4.54e-10!115;CL:0000255!4.54e-10!115;CL:0000219!9.93e-10!54;CL:0002031!1.29e-09!25;CL:0002320!1.05e-08!46;CL:0000134!1.05e-08!46;CL:0000838!1.77e-07!12;CL:0000084!6.03e-07!11;CL:0000827!6.03e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.05e-14,3;CL:0002202,1.05e-14,3;CL:0000069,1.05e-14,3;CL:0002632,1.05e-14,3;CL:0002368,1.05e-14,3;CL:0000307,1.05e-14,3;CL:0000377,1.05e-14,3;CL:0000349,1.30e-14,3;CL:0000351,1.30e-14,3;CL:0000988,2.41e-12,32;CL:0002032,2.41e-12,32;CL:0000037,2.41e-12,32;CL:0000837,2.41e-12,32;CL:0002320,6.73e-12,46;CL:0000134,6.73e-12,46;CL:0000219,1.01e-11,54;CL:0000049,1.20e-10,19;CL:0000763,1.94e-09,16;CL:0000050,4.05e-08,9;CL:0002031,5.14e-08,25;CL:0000034,6.38e-08,97;CL:0000553,2.78e-07,6;CL:0000556,2.78e-07,6;CL:0002027,3.46e-07,3;CL:0002006,3.46e-07,3;CL:0002024,3.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.05e-08!46;UBERON:0000344!2.70e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.05e-14,3;UBERON:0001005,1.05e-14,3;UBERON:0007196,1.05e-14,3;UBERON:0001558,1.05e-14,3;UBERON:0000358,1.30e-14,3;UBERON:0000307,1.30e-14,3;UBERON:0007010,1.30e-14,3;UBERON:0002384,6.73e-12,46;UBERON:0002371,9.89e-07,16 | |||
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,2.39705155515707,2.87179772383211,0,0.34968160967599,0,2.83465374345756,2.79824751251259,1.10411757875383,0.548457734422955,0.42438965179803,0,0.0992909512008853,1.56719873483361,0.799962113967033,1.60586496747019,0,0.86152399231815,0.430942465371778,0.760093677825496,0.252030129759931,0.221730510655305,1.90509202037889,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,2.34751199332871,0.906858721281426,0,1.72084775396277,0,0,0,0,0,0.170430322578058,2.33807404142582,0.70667914902068,0.281686839553361,0,0,0,3.89683873820185,2.53359865475099,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39961092397363,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,1.40442637462647,2.31613116403244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,1.77588762699252,5.20340368334959,3.8613461763738,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.503637815735669,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,2.39705155515707,2.87179772383211,0,0.34968160967599,0,2.83465374345756,2.79824751251259,1.10411757875383,0.548457734422955,0.42438965179803,0,0.0992909512008853,1.56719873483361,0.799962113967033,1.60586496747019,0,0.86152399231815,0.430942465371778,0.760093677825496,0.252030129759931,0.221730510655305,1.90509202037889,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,2.34751199332871,0.906858721281426,0,1.72084775396277,0,0,0,0,0,0.170430322578058,2.33807404142582,0.70667914902068,0.281686839553361,0,0,0,3.89683873820185,2.53359865475099,2.52762222507392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39961092397363,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0,0.180062129805349,0.150704817835715,0,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.199034266818493,1.40442637462647,2.31613116403244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.44292937929755,0,0,0,0,0,0.54390568381871,0.491764273019036,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0.339956859987711,0.139951452323658,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,1.77588762699252,5.20340368334959,3.8613461763738,0,0,0,0,0,0,0,0,0.515559547031063,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Gm5121 | |short_description=p1@Gm5121 | ||
}} | }} |
Latest revision as of 21:27, 26 September 2015
Short description: | p1@Gm5121 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5121_5end |
Coexpression cluster: | MCL_coexpression_mm9:1129 |
Association with transcript: | -35bp_to_ENSMUST00000085711_5end |
EntrezGene: | Gm5121 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trachea | 1.05e-14 | 3 |
respiratory airway | 1.05e-14 | 3 |
tracheobronchial tree | 1.05e-14 | 3 |
lower respiratory tract | 1.05e-14 | 3 |
blastocyst | 1.30e-14 | 3 |
blastula | 1.30e-14 | 3 |
cleaving embryo | 1.30e-14 | 3 |
connective tissue | 6.73e-12 | 46 |
bone marrow | 9.89e-07 | 16 |