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FFCP PHASE1:Mm9::chr9:56483667..56483687,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:56483667..56483687,-
|DHSsupport=NA
|short_description=p3@Lingo1
|DPIdataset=NA
|description=CAGE_peak_3_at_Lingo1_5end
|association_with_transcript=-232bp_to_ENSMUST00000114256_5end
|EntrezGene=235402
|EntrezGene=235402
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=A9DA50
|UniProt=A9DA50
|association_with_transcript=-232bp_to_ENSMUST00000114256_5end
|cluster_id=chr9:56483667..56483687,-
|description=CAGE_peak_3_at_Lingo1_5end
|id=chr9:56483667..56483687,-
|ontology_enrichment_celltype=CL:0000117!6.49e-13!23;CL:0000337!6.49e-13!23;CL:0000221!1.39e-12!44;CL:0000133!1.39e-12!44;CL:0002319!2.12e-12!43;CL:0000055!5.65e-11!50;CL:0000540!7.80e-11!33;CL:0000047!7.80e-11!33;CL:0000031!7.80e-11!33;CL:0000404!7.80e-11!33;CL:0000393!7.56e-10!39;CL:0000211!7.56e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,5.50e-18,23;CL:0000337,5.50e-18,23;CL:0002319,2.27e-12,43;CL:0000221,6.15e-12,44;CL:0000133,6.15e-12,44;CL:0000540,6.94e-11,33;CL:0000047,6.94e-11,33;CL:0000031,6.94e-11,33;CL:0000404,6.94e-11,33;CL:0000393,2.25e-09,39;CL:0000211,2.25e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.84e-28!75;UBERON:0001016!2.84e-28!75;UBERON:0004121!6.50e-28!102;UBERON:0000924!6.50e-28!102;UBERON:0006601!6.50e-28!102;UBERON:0001017!7.89e-28!73;UBERON:0005743!7.89e-28!73;UBERON:0000033!4.05e-24!63;UBERON:0002346!1.58e-23!71;UBERON:0003075!1.58e-23!71;UBERON:0007284!1.58e-23!71;UBERON:0001049!2.35e-22!52;UBERON:0005068!2.35e-22!52;UBERON:0006241!2.35e-22!52;UBERON:0007135!2.35e-22!52;UBERON:0000955!2.90e-21!50;UBERON:0006238!2.90e-21!50;UBERON:0003056!7.51e-21!49;UBERON:0002616!1.35e-20!49;UBERON:0002020!7.32e-18!34;UBERON:0003080!4.23e-17!40;UBERON:0002780!1.92e-16!39;UBERON:0001890!1.92e-16!39;UBERON:0006240!1.92e-16!39;UBERON:0002791!1.48e-14!29;UBERON:0003528!1.48e-14!29;UBERON:0001893!1.48e-14!29;UBERON:0007811!6.98e-12!86;UBERON:0000153!2.02e-10!94;UBERON:0000956!4.06e-10!21;UBERON:0001869!4.06e-10!21;UBERON:0000203!4.06e-10!21;UBERON:0002021!4.07e-09!10;UBERON:0000411!4.07e-09!10;UBERON:0001950!4.07e-09!10;UBERON:0002619!7.17e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.18e-37,54;UBERON:0001016,2.15e-36,75;UBERON:0001017,3.59e-36,73;UBERON:0002346,2.63e-35,64;UBERON:0003075,2.63e-35,64;UBERON:0007284,2.63e-35,64;UBERON:0004121,3.00e-34,95;UBERON:0000924,3.00e-34,95;UBERON:0006601,3.00e-34,95;UBERON:0001049,4.62e-34,52;UBERON:0005068,4.62e-34,52;UBERON:0006241,4.62e-34,52;UBERON:0007135,4.62e-34,52;UBERON:0010371,2.35e-29,73;UBERON:0002020,4.92e-29,34;UBERON:0000955,4.91e-28,47;UBERON:0006238,4.91e-28,47;UBERON:0003056,8.30e-28,49;UBERON:0002616,7.66e-27,46;UBERON:0003080,1.76e-24,40;UBERON:0002780,2.79e-23,39;UBERON:0001890,2.79e-23,39;UBERON:0006240,2.79e-23,39;UBERON:0003528,9.85e-23,29;UBERON:0002791,9.85e-23,29;UBERON:0001893,9.85e-23,29;UBERON:0010314,8.45e-22,92;UBERON:0002021,2.23e-16,10;UBERON:0000411,2.23e-16,10;UBERON:0001950,2.23e-16,10;UBERON:0000956,2.49e-14,21;UBERON:0001869,2.49e-14,21;UBERON:0000203,2.49e-14,21;UBERON:0002619,3.44e-14,17;UBERON:0000025,9.58e-12,114;UBERON:0004111,3.09e-10,122;UBERON:0002420,7.88e-10,8;UBERON:0007245,7.88e-10,8;UBERON:0010009,7.88e-10,8;UBERON:0010011,7.88e-10,8;UBERON:0000454,7.88e-10,8;UBERON:0003076,9.01e-10,12;UBERON:0003057,9.01e-10,12;UBERON:0002240,1.86e-08,6;UBERON:0005174,1.86e-08,6;UBERON:0001137,1.86e-08,6;UBERON:0001948,1.22e-07,5;UBERON:0002315,1.22e-07,5;UBERON:0000119,3.36e-07,176;UBERON:0000483,7.04e-07,174;UBERON:0000369,9.26e-07,5;UBERON:0002435,9.26e-07,5;UBERON:0000204,9.26e-07,5;UBERON:0010082,9.26e-07,5
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.912392380975631,0.734187008646726,2.34717403304412,1.30815093828268,0,0,0.839918529752175,2.87505128729943,0,0,0,0,0,0,4.45096213891115,7.93486468908049,4.43681982454325,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0.898800331555214,2.68952813725088,0.207379224616955,0.945041568321835,1.05162480675691,7.9982275633065,5.74258206474195,0.61245399607477,0.862609239164127,2.75765635983006,12.1127469099328,13.0241084846891,10.2916377281683,1.97829431595291,2.56165402086747,2.6045668527838,3.07101298901519,1.68828783009504,4.27835093775068,6.18720029494702,4.27115042397309,6.33758115806022,0.227178579999552,1.13357340160178,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,1.02765491747154,0,0,0.173485326766136,1.52232739156071,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,6.14141621559773,19.6725259212009,2.76439574648302,55.2761338211439,48.8416523500931,9.14267396062064,12.1680947300818,0.611036183101898,1.61729061793121,4.80173241023982,0.631325567659422,0.390361328888111,0.919608417733892,2.52086981727489,1.50704817835715,2.65342346690179,2.17793324484245,1.3118241438362,1.81092359517311,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,22.9216043934899,2.77842453424068,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.56880943980467,4.21962071731931,0,0,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0,4.4984984299053,0,0.534196811001766,0.81443479676788,0,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,1.24138163549592,1.07021290561242,0.822745103010605,1.8267896946876,0,0,0,0.16488625294148,0.807322133479528,0.120625849856312,0.238744688006273,0.492422699235184,0,1.66882771809459,0,0.206386867963223,0.925972636848558,0,0.410082683163076,0,0,0,0,0,0.790839983952838,0.406638934253697,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,52.5219213633872,41.4292712856459,49.2690141557881,51.2122483384189,57.546931660734,79.3163592259185,52.6517550180809,68.4488228900815,52.5645194421677,84.9126911272985,0.31136204275253,0.399024873401031,0.512200817262403,0.729320151204882,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,0.252697211763798,0,0.565879024158229,1.40462261204824,0.704276676453562,0.804096565378586,1.42888107384922,0.811190281613988,0.38581844092741,0.824171801606613,0.294397840268795,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.752875043322645,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,2.99772693525535,1.16965804222704,0.859484216193193,0.57386499620653,0,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.912392380975631,0.734187008646726,2.34717403304412,1.30815093828268,0,0,0.839918529752175,2.87505128729943,0,0,0,0,0,0,4.45096213891115,7.93486468908049,4.43681982454325,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0,0.898800331555214,2.68952813725088,0.207379224616955,0.945041568321835,1.05162480675691,7.9982275633065,5.74258206474195,0.61245399607477,0.862609239164127,2.75765635983006,12.1127469099328,13.0241084846891,10.2916377281683,1.97829431595291,2.56165402086747,2.6045668527838,3.07101298901519,1.68828783009504,4.27835093775068,6.18720029494702,4.27115042397309,6.33758115806022,0.227178579999552,1.13357340160178,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,1.02765491747154,0,0,0.173485326766136,1.52232739156071,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,6.14141621559773,19.6725259212009,2.76439574648302,55.2761338211439,48.8416523500931,9.14267396062064,12.1680947300818,0.611036183101898,1.61729061793121,4.80173241023982,0.631325567659422,0.390361328888111,0.919608417733892,2.52086981727489,1.50704817835715,2.65342346690179,2.17793324484245,1.3118241438362,1.81092359517311,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,22.9216043934899,2.77842453424068,0,0,0.426576501070468,0.232236671860439,0,0,0.22237804384487,0,0,0.494096864172033,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.335012514883631,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,2.56880943980467,4.21962071731931,0,0,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0,4.4984984299053,0,0.534196811001766,0.81443479676788,0,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,0,0.18006109403131,0.646793418913773,0.214337035031592,1.24138163549592,1.07021290561242,0.822745103010605,1.8267896946876,0,0,0,0.16488625294148,0.807322133479528,0.120625849856312,0.238744688006273,0.492422699235184,0,1.66882771809459,0,0.206386867963223,0.925972636848558,0,0.410082683163076,0,0,0,0,0,0.790839983952838,0.406638934253697,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0,0.258319646955462,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0.183151624267265,0,0,52.5219213633872,41.4292712856459,49.2690141557881,51.2122483384189,57.546931660734,79.3163592259185,52.6517550180809,68.4488228900815,52.5645194421677,84.9126911272985,0.31136204275253,0.399024873401031,0.512200817262403,0.729320151204882,0.628839487883947,0.735374033800057,0.888986911206461,0.618105171716683,0.64183841918363,0.252697211763798,0,0.565879024158229,1.40462261204824,0.704276676453562,0.804096565378586,1.42888107384922,0.811190281613988,0.38581844092741,0.824171801606613,0.294397840268795,1.02860775715625,0.887379030796687,0.476872379894642,0.872078499793971,0.752875043322645,0.507687647350059,0.182927972872773,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,2.99772693525535,1.16965804222704,0.859484216193193,0.57386499620653,0,0.231867835620421
|short_description=p3@Lingo1
}}
}}

Latest revision as of 21:12, 26 September 2015

Short description:p3@Lingo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lingo1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -232bp_to_ENSMUST00000114256_5end
EntrezGene:Lingo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lingo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D555.28
cortex, neonate N30.CNhs11107.1392-42F248.84
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E822.92
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A152.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.27
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.21
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A457.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A579.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A652.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A768.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A852.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A984.91
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.50e-1823
neuroblast (sensu Vertebrata)5.50e-1823
neural cell2.27e-1243
ectodermal cell6.15e-1244
neurectodermal cell6.15e-1244
neuron6.94e-1133
neuronal stem cell6.94e-1133
neuroblast6.94e-1133
electrically signaling cell6.94e-1133
electrically responsive cell2.25e-0939
electrically active cell2.25e-0939

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.18e-3754
nervous system2.15e-3675
central nervous system3.59e-3673
neurectoderm2.63e-3564
neural plate2.63e-3564
presumptive neural plate2.63e-3564
ectoderm-derived structure3.00e-3495
ectoderm3.00e-3495
presumptive ectoderm3.00e-3495
neural tube4.62e-3452
neural rod4.62e-3452
future spinal cord4.62e-3452
neural keel4.62e-3452
ecto-epithelium2.35e-2973
gray matter4.92e-2934
brain4.91e-2847
future brain4.91e-2847
pre-chordal neural plate8.30e-2849
regional part of brain7.66e-2746
anterior neural tube1.76e-2440
regional part of forebrain2.79e-2339
forebrain2.79e-2339
future forebrain2.79e-2339
brain grey matter9.85e-2329
regional part of telencephalon9.85e-2329
telencephalon9.85e-2329
structure with developmental contribution from neural crest8.45e-2292
occipital lobe2.23e-1610
visual cortex2.23e-1610
neocortex2.23e-1610
cerebral cortex2.49e-1421
cerebral hemisphere2.49e-1421
pallium2.49e-1421
regional part of cerebral cortex3.44e-1417
tube9.58e-12114
anatomical conduit3.09e-10122
basal ganglion7.88e-108
nuclear complex of neuraxis7.88e-108
aggregate regional part of brain7.88e-108
collection of basal ganglia7.88e-108
cerebral subcortex7.88e-108
posterior neural tube9.01e-1012
chordal neural plate9.01e-1012
spinal cord1.86e-086
dorsal region element1.86e-086
dorsum1.86e-086
regional part of spinal cord1.22e-075
gray matter of spinal cord1.22e-075
cell layer3.36e-07176
epithelium7.04e-07174
corpus striatum9.26e-075
striatum9.26e-075
ventral part of telencephalon9.26e-075
future corpus striatum9.26e-075
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