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FFCP PHASE1:Mm9::chr9:56483412..56483427,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:56483412..56483427,-
|DHSsupport=NA
|short_description=p5@Lingo1
|DPIdataset=NA
|description=CAGE_peak_5_at_Lingo1_5end
|association_with_transcript=7bp_to_ENSMUST00000114256_5end
|EntrezGene=235402
|EntrezGene=235402
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=A9DA50
|UniProt=A9DA50
|association_with_transcript=7bp_to_ENSMUST00000114256_5end
|cluster_id=chr9:56483412..56483427,-
|description=CAGE_peak_5_at_Lingo1_5end
|id=chr9:56483412..56483427,-
|ontology_enrichment_celltype=CL:0000117!2.15e-14!23;CL:0000337!2.15e-14!23;CL:0002319!1.57e-11!43;CL:0000221!2.90e-11!44;CL:0000133!2.90e-11!44;CL:0000055!9.71e-11!50;CL:0000540!1.10e-08!33;CL:0000047!1.10e-08!33;CL:0000031!1.10e-08!33;CL:0000404!1.10e-08!33;CL:0000393!1.64e-08!39;CL:0000211!1.64e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-23,23;CL:0000337,8.51e-23,23;CL:0000540,5.41e-15,33;CL:0000047,5.41e-15,33;CL:0000031,5.41e-15,33;CL:0000404,5.41e-15,33;CL:0002319,1.32e-14,43;CL:0000221,4.45e-14,44;CL:0000133,4.45e-14,44;CL:0000393,1.22e-12,39;CL:0000211,1.22e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.18e-27!75;UBERON:0001016!3.18e-27!75;UBERON:0001017!4.78e-27!73;UBERON:0005743!4.78e-27!73;UBERON:0001049!8.18e-26!52;UBERON:0005068!8.18e-26!52;UBERON:0006241!8.18e-26!52;UBERON:0007135!8.18e-26!52;UBERON:0002346!2.31e-25!71;UBERON:0003075!2.31e-25!71;UBERON:0007284!2.31e-25!71;UBERON:0004121!5.00e-25!102;UBERON:0000924!5.00e-25!102;UBERON:0006601!5.00e-25!102;UBERON:0000033!1.04e-24!63;UBERON:0000955!6.84e-24!50;UBERON:0006238!6.84e-24!50;UBERON:0002616!2.10e-23!49;UBERON:0002020!7.22e-21!34;UBERON:0003056!1.25e-20!49;UBERON:0003080!7.87e-19!40;UBERON:0002780!3.34e-18!39;UBERON:0001890!3.34e-18!39;UBERON:0006240!3.34e-18!39;UBERON:0002791!4.11e-17!29;UBERON:0003528!4.11e-17!29;UBERON:0001893!4.11e-17!29;UBERON:0000956!1.86e-12!21;UBERON:0001869!1.86e-12!21;UBERON:0000203!1.86e-12!21;UBERON:0007811!6.14e-12!86;UBERON:0000153!1.57e-11!94;UBERON:0002619!1.43e-10!17;UBERON:0002021!3.43e-08!10;UBERON:0000411!3.43e-08!10;UBERON:0001950!3.43e-08!10;UBERON:0003076!1.57e-07!12;UBERON:0003057!1.57e-07!12;UBERON:0000025!1.84e-07!114;UBERON:0000468!7.16e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.58e-38,73;UBERON:0001016,1.05e-36,75;UBERON:0000073,3.82e-35,54;UBERON:0001049,1.24e-32,52;UBERON:0005068,1.24e-32,52;UBERON:0006241,1.24e-32,52;UBERON:0007135,1.24e-32,52;UBERON:0002020,2.18e-31,34;UBERON:0004121,3.79e-30,95;UBERON:0000924,3.79e-30,95;UBERON:0006601,3.79e-30,95;UBERON:0002346,2.92e-29,64;UBERON:0003075,2.92e-29,64;UBERON:0007284,2.92e-29,64;UBERON:0000955,3.04e-26,47;UBERON:0006238,3.04e-26,47;UBERON:0002616,1.94e-25,46;UBERON:0010371,3.82e-25,73;UBERON:0003528,7.75e-25,29;UBERON:0002791,7.75e-25,29;UBERON:0001893,7.75e-25,29;UBERON:0003080,1.57e-23,40;UBERON:0002780,1.72e-22,39;UBERON:0001890,1.72e-22,39;UBERON:0006240,1.72e-22,39;UBERON:0003056,2.23e-22,49;UBERON:0010314,5.32e-17,92;UBERON:0000956,1.12e-16,21;UBERON:0001869,1.12e-16,21;UBERON:0000203,1.12e-16,21;UBERON:0002021,2.02e-13,10;UBERON:0000411,2.02e-13,10;UBERON:0001950,2.02e-13,10;UBERON:0002619,2.46e-13,17;UBERON:0003076,2.35e-09,12;UBERON:0003057,2.35e-09,12;UBERON:0002420,2.48e-09,8;UBERON:0007245,2.48e-09,8;UBERON:0010009,2.48e-09,8;UBERON:0010011,2.48e-09,8;UBERON:0000454,2.48e-09,8;UBERON:0000025,2.93e-09,114;UBERON:0002240,1.43e-08,6;UBERON:0005174,1.43e-08,6;UBERON:0001137,1.43e-08,6;UBERON:0004111,1.87e-08,122;UBERON:0001948,8.50e-08,5;UBERON:0002315,8.50e-08,5;UBERON:0000369,9.51e-07,5;UBERON:0002435,9.51e-07,5;UBERON:0000204,9.51e-07,5;UBERON:0010082,9.51e-07,5
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.872100625521786,0.878744730937887,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,0,0.515672092277442,8.09265843438391,11.1088105647127,5.70448263155561,0,0,0.449949858640699,0,0,2.09720077362883,7.30014780110954,1.97010263386108,1.4850653216486,1.47227472945967,12.8542942981712,8.83474163806454,1.71487118900936,2.68367318851062,0.919218786610021,4.40463523997555,9.3211756802187,5.06901559745603,6.4624280987795,6.22115976496386,6.77187381723788,3.62937898701795,2.25105044012672,3.66715794664344,11.1958862479994,8.82704420954438,9.87917062874093,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,5.02672096352292,0,0,0,0,5.39246301857362,5.03250663100489,5.02617408451458,7.64827008846016,8.69432554923124,5.61027720310812,4.70499662896497,0.611036183101898,0.746441823660558,2.52722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,1.56483948048054,1.40925092313335,1.03071897015702,1.03481348295606,0,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,4.41608891984667,9.8788427884113,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0,0.157635144106191,0,0.478364305972461,0,0,0.289298117163023,0,0,0,0,4.0137647496948,2.93029216480508,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,1.60660658210904,0,0.890328018336276,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,1.24858172321449,1.64549020602121,0.913394847343798,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,2.22510362412612,0,0.82554747185289,0,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.299033092087958,1.15820943319968,0.972255941720238,0.387479470433193,0.506868376472335,0.821500670520278,0.13020438484395,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0.549454872801795,0,0.501572104035363,9.03602948187307,16.1113832777512,14.3223878359849,12.7171354934329,7.53590771747707,3.7769694869485,10.1253375034771,8.55610286126019,5.43770890781046,9.83744592328458,0.415149390336707,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,1.33348036680969,0.618105171716683,1.28367683836726,1.26348605881899,2.02783439912192,1.88626341386076,0.842773567228942,1.53660365771686,1.60819313075717,0.952587382566147,1.39061191133827,0.77163688185482,2.88460130562315,1.03039244094078,0.342869252385415,1.06485483695602,0.953744759789284,0.145346416632329,0.470546902076653,1.01537529470012,1.09756783723664,0.789209134313529,1.7654534799962,0,1.42362021749009,0.689531376628944,1.22769312950907,1.08455788830176,0.578719832943424,1.24905288968973,0.701794825336225,0.859484216193193,1.72159498861959,0.661774257358546,0.927471342481686
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.506884656097573,0.367093504323363,0.782391344348039,0.872100625521786,0.878744730937887,0.58328969722285,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,0,0.515672092277442,8.09265843438391,11.1088105647127,5.70448263155561,0,0,0.449949858640699,0,0,2.09720077362883,7.30014780110954,1.97010263386108,1.4850653216486,1.47227472945967,12.8542942981712,8.83474163806454,1.71487118900936,2.68367318851062,0.919218786610021,4.40463523997555,9.3211756802187,5.06901559745603,6.4624280987795,6.22115976496386,6.77187381723788,3.62937898701795,2.25105044012672,3.66715794664344,11.1958862479994,8.82704420954438,9.87917062874093,0.37863096666592,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.17112318804619,5.02672096352292,0,0,0,0,5.39246301857362,5.03250663100489,5.02617408451458,7.64827008846016,8.69432554923124,5.61027720310812,4.70499662896497,0.611036183101898,0.746441823660558,2.52722758433675,0.210441855886474,0.390361328888111,0.919608417733892,0.900310649026746,0.60281927134286,1.56483948048054,1.40925092313335,1.03071897015702,1.03481348295606,0,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,4.41608891984667,9.8788427884113,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0,0,0.569003702859245,0.342745537829186,1.1270773567308,0.203651327845314,0,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.325929952884052,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0,0.157635144106191,0,0.478364305972461,0,0,0.289298117163023,0,0,0,0,4.0137647496948,2.93029216480508,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,1.60660658210904,0,0.890328018336276,0.325773918707152,0.494910368917606,0,0.242780636154981,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.709360934569094,1.24858172321449,1.64549020602121,0.913394847343798,0,0,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0.328281799490123,0,2.22510362412612,0,0.82554747185289,0,0,0.27338845544205,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0,0.218362563746178,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0.299033092087958,1.15820943319968,0.972255941720238,0.387479470433193,0.506868376472335,0.821500670520278,0.13020438484395,0,0,0,0,0.202725215290164,0.410843828659309,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0,0.549454872801795,0,0.501572104035363,9.03602948187307,16.1113832777512,14.3223878359849,12.7171354934329,7.53590771747707,3.7769694869485,10.1253375034771,8.55610286126019,5.43770890781046,9.83744592328458,0.415149390336707,0.798049746802062,0.682934423016537,0.486213434136588,0.209613162627982,0.735374033800057,1.33348036680969,0.618105171716683,1.28367683836726,1.26348605881899,2.02783439912192,1.88626341386076,0.842773567228942,1.53660365771686,1.60819313075717,0.952587382566147,1.39061191133827,0.77163688185482,2.88460130562315,1.03039244094078,0.342869252385415,1.06485483695602,0.953744759789284,0.145346416632329,0.470546902076653,1.01537529470012,1.09756783723664,0.789209134313529,1.7654534799962,0,1.42362021749009,0.689531376628944,1.22769312950907,1.08455788830176,0.578719832943424,1.24905288968973,0.701794825336225,0.859484216193193,1.72159498861959,0.661774257358546,0.927471342481686
|short_description=p5@Lingo1
}}
}}

Latest revision as of 21:11, 26 September 2015

Short description:p5@Lingo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lingo1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 7bp_to_ENSMUST00000114256_5end
EntrezGene:Lingo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lingo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G19.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.51e-2323
neuroblast (sensu Vertebrata)8.51e-2323
neuron5.41e-1533
neuronal stem cell5.41e-1533
neuroblast5.41e-1533
electrically signaling cell5.41e-1533
neural cell1.32e-1443
ectodermal cell4.45e-1444
neurectodermal cell4.45e-1444
electrically responsive cell1.22e-1239
electrically active cell1.22e-1239

Uber anatomy
Ontology termp-valuen
central nervous system3.58e-3873
nervous system1.05e-3675
regional part of nervous system3.82e-3554
neural tube1.24e-3252
neural rod1.24e-3252
future spinal cord1.24e-3252
neural keel1.24e-3252
gray matter2.18e-3134
ectoderm-derived structure3.79e-3095
ectoderm3.79e-3095
presumptive ectoderm3.79e-3095
neurectoderm2.92e-2964
neural plate2.92e-2964
presumptive neural plate2.92e-2964
brain3.04e-2647
future brain3.04e-2647
regional part of brain1.94e-2546
ecto-epithelium3.82e-2573
brain grey matter7.75e-2529
regional part of telencephalon7.75e-2529
telencephalon7.75e-2529
anterior neural tube1.57e-2340
regional part of forebrain1.72e-2239
forebrain1.72e-2239
future forebrain1.72e-2239
pre-chordal neural plate2.23e-2249
structure with developmental contribution from neural crest5.32e-1792
cerebral cortex1.12e-1621
cerebral hemisphere1.12e-1621
pallium1.12e-1621
occipital lobe2.02e-1310
visual cortex2.02e-1310
neocortex2.02e-1310
regional part of cerebral cortex2.46e-1317
posterior neural tube2.35e-0912
chordal neural plate2.35e-0912
basal ganglion2.48e-098
nuclear complex of neuraxis2.48e-098
aggregate regional part of brain2.48e-098
collection of basal ganglia2.48e-098
cerebral subcortex2.48e-098
tube2.93e-09114
spinal cord1.43e-086
dorsal region element1.43e-086
dorsum1.43e-086
anatomical conduit1.87e-08122
regional part of spinal cord8.50e-085
gray matter of spinal cord8.50e-085
corpus striatum9.51e-075
striatum9.51e-075
ventral part of telencephalon9.51e-075
future corpus striatum9.51e-075
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