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FFCP PHASE1:Mm9::chr12:81361483..81361492,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:81361483..81361492,-
|DHSsupport=NA
|short_description=p6@Actn1
|DPIdataset=NA
|description=CAGE_peak_6_at_Actn1_5end
|association_with_transcript=-125bp_to_ENSMUST00000021554,NM_134156,uc007oap.2,uc007oaq.2_5end
|EntrezGene=109711
|EntrezGene=109711
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q7TPR4,A1BN54
|UniProt=Q7TPR4,A1BN54
|association_with_transcript=-125bp_to_ENSMUST00000021554,NM_134156,uc007oap.2,uc007oaq.2_5end
|cluster_id=chr12:81361483..81361492,-
|description=CAGE_peak_6_at_Actn1_5end
|id=chr12:81361483..81361492,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-10,9;CL:0000789,1.24e-10,9;CL:0002420,1.24e-10,9;CL:0002419,1.24e-10,9;CL:0000790,1.24e-10,9;CL:0000624,7.61e-09,8;CL:0000084,1.42e-08,11;CL:0000827,1.42e-08,11;CL:0000893,8.36e-08,6;CL:0002489,8.36e-08,6;CL:0000898,8.36e-08,6;CL:0000809,8.36e-08,6;CL:0000810,8.36e-08,6;CL:0000895,8.36e-08,6;CL:0000808,8.36e-08,6;CL:0000894,8.36e-08,6;CL:0000806,8.36e-08,6;CL:0000807,8.36e-08,6;CL:0000805,8.36e-08,6;CL:0002425,8.36e-08,6;CL:0002436,8.36e-08,6;CL:0002427,8.36e-08,6;CL:0002428,8.36e-08,6;CL:0002429,8.36e-08,6;CL:0002433,8.36e-08,6;CL:0002431,8.36e-08,6;CL:0002432,8.36e-08,6;CL:0000838,8.44e-08,12;CL:0000542,3.81e-07,13;CL:0000051,3.81e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!2.78e-11!42;UBERON:0000065!6.16e-11!41;UBERON:0003408!9.87e-10!24;UBERON:0002370!2.13e-09!23;UBERON:0000974!2.13e-09!23;UBERON:0004807!2.13e-09!23;UBERON:0005058!2.13e-09!23;UBERON:0003351!2.13e-09!23;UBERON:0009113!2.13e-09!23;UBERON:0003295!2.13e-09!23;UBERON:0009722!2.13e-09!23;UBERON:0005562!2.13e-09!23;UBERON:0007690!2.13e-09!23;UBERON:0006562!3.08e-09!24;UBERON:0001557!3.08e-09!24;UBERON:0001042!3.08e-09!24;UBERON:0008814!3.08e-09!24;UBERON:0009145!3.08e-09!24;UBERON:0004177!1.18e-08!29;UBERON:0000072!1.45e-07!27;UBERON:0003081!2.10e-07!88;UBERON:0000926!6.47e-07!193;UBERON:0004120!6.47e-07!193;UBERON:0006603!6.47e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.23e-15,23;UBERON:0000974,5.23e-15,23;UBERON:0004807,5.23e-15,23;UBERON:0005058,5.23e-15,23;UBERON:0003351,5.23e-15,23;UBERON:0009113,5.23e-15,23;UBERON:0003295,5.23e-15,23;UBERON:0009722,5.23e-15,23;UBERON:0005562,5.23e-15,23;UBERON:0007690,5.23e-15,23;UBERON:0006562,2.82e-14,24;UBERON:0003408,2.82e-14,24;UBERON:0001557,2.82e-14,24;UBERON:0001042,2.82e-14,24;UBERON:0008814,2.82e-14,24;UBERON:0009145,2.82e-14,24;UBERON:0004177,2.58e-13,29;UBERON:0005057,2.58e-13,29;UBERON:0000072,2.09e-12,27;UBERON:0000077,1.48e-10,35;UBERON:0000065,4.42e-10,41;UBERON:0001004,9.05e-10,42;UBERON:0002193,1.42e-09,48;UBERON:0002405,1.42e-09,48;UBERON:0002390,4.97e-09,45;UBERON:0003061,4.97e-09,45;UBERON:0007811,1.12e-08,36;UBERON:0000490,3.14e-07,66;UBERON:0000153,7.21e-07,43
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0,0.258246646883153,3.51971805379167,4.68129052643987,1.02730780935303,0.957265907944037,2.05440875917447,0.786783621770977,0,0,0,0,0,0.42438965179803,0.340173160604279,0,0,0.639969691173627,0,1.72269589234506,1.29228598847722,0.430942465371778,0.190023419456374,0,0,0,0,0,1.1554064790051,0,0,1.25559489221072,0.7813353445238,2.09409497589519,4.1176204162171,0.683045484958446,1.94204141212461,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.219686182734472,1.1665793944457,0.139986421625363,0,0.167782606057736,2.17608642603403,1.00828139742739,1.54355661621568,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0.852151612890289,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0.45673551887624,1.03575153458869,0,0.173485326766136,0,0,0,0,0,0.988779870937496,1.3013942122792,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0,0,0.162241263067758,0.509196819251581,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.308534225774757,0.465067889500816,0.804820204198858,0.116765342367169,0.329119699826961,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.605050573870028,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,2.25415471346161,0.407302655690628,0.193952487167626,0.49095073923223,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,1.10851914099963,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,1.11618338060241,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0,0,0,0,0.655739781506702,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0.851640511249612,0.534196811001766,0.81443479676788,1.15479086080775,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,0.63549621259146,0.441056796109924,0.98931751764888,0.322928853391811,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,0.370850604021019,0.512612642393558,1.03193433981611,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.743881101528023,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,1.58005560314089,0,0.308132871494482,0.129920822977795,0.537080087002444,0.596044064343795,1.20195449519969,1.62458479892035,1.51449674922221,1.143102099825,0.604957110821043,0.877120926657772,1.73181314952593,0.935015217452552,0.226730383615211,0,0.538283139656854,0.167884616364078,0.772758376128762,0.750729901804728,1.46521299413812,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.463537303779422,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0.191288332068843,0,0
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,0,0,0.671517087647559,0,0.258246646883153,3.51971805379167,4.68129052643987,1.02730780935303,0.957265907944037,2.05440875917447,0.786783621770977,0,0,0,0,0,0.42438965179803,0.340173160604279,0,0,0.639969691173627,0,1.72269589234506,1.29228598847722,0.430942465371778,0.190023419456374,0,0,0,0,0,1.1554064790051,0,0,1.25559489221072,0.7813353445238,2.09409497589519,4.1176204162171,0.683045484958446,1.94204141212461,0.251793635951155,0.202753862439029,0.367093504323363,0,0.218025156380447,0.219686182734472,1.1665793944457,0.139986421625363,0,0.167782606057736,2.17608642603403,1.00828139742739,1.54355661621568,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0,0.852151612890289,0,0.35333957451034,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0,0.45673551887624,1.03575153458869,0,0.173485326766136,0,0,0,0,0,0.988779870937496,1.3013942122792,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0,0,0.162241263067758,0.509196819251581,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0,0,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.828503090142008,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.308534225774757,0.465067889500816,0.804820204198858,0.116765342367169,0.329119699826961,0.32833492815819,0.243206428637567,0.292399974850665,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0.264450566663544,0,0.232236671860439,0.257734922644187,0.605050573870028,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0,0,0,0.199141273254367,0.189667900953082,0,2.25415471346161,0.407302655690628,0.193952487167626,0.49095073923223,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.549122826376163,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,1.10851914099963,0.757965647081939,0.488894929326078,0.339490171550376,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.664394068946325,1.11618338060241,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0,0,0,0,0.655739781506702,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0.851640511249612,0.534196811001766,0.81443479676788,1.15479086080775,0,0.242780636154981,0,0.377210159511796,0.590603785761546,0.307435147943927,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.18006109403131,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.469343416127421,0.63549621259146,0.441056796109924,0.98931751764888,0.322928853391811,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,0.370850604021019,0.512612642393558,1.03193433981611,0.185194527369712,0.565105371014073,0,0,0,0,0,0,0.158167996790568,0,0.432021363287205,0.209088296014469,0.218362563746178,0,0.743881101528023,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0,0,0,1.58005560314089,0,0.308132871494482,0.129920822977795,0.537080087002444,0.596044064343795,1.20195449519969,1.62458479892035,1.51449674922221,1.143102099825,0.604957110821043,0.877120926657772,1.73181314952593,0.935015217452552,0.226730383615211,0,0.538283139656854,0.167884616364078,0.772758376128762,0.750729901804728,1.46521299413812,0.428736758158132,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.463537303779422,0,0,0,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0,0,0.191288332068843,0,0
|short_description=p6@Actn1
}}
}}

Latest revision as of 20:56, 26 September 2015

Short description:p6@Actn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Actn1_5end
Coexpression cluster:NA
Association with transcript: -125bp_to_ENSMUST00000021554, NM_134156, uc007oap.2, uc007oaq.2_5end
EntrezGene:Actn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Actn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.24e-109
alpha-beta T cell1.24e-109
immature T cell1.24e-109
mature T cell1.24e-109
immature alpha-beta T cell1.24e-109
CD4-positive, alpha-beta T cell7.61e-098
T cell1.42e-0811
pro-T cell1.42e-0811
thymocyte8.36e-086
double negative thymocyte8.36e-086
naive T cell8.36e-086
double-positive, alpha-beta thymocyte8.36e-086
CD4-positive, alpha-beta thymocyte8.36e-086
naive thymus-derived CD4-positive, alpha-beta T cell8.36e-086
DN4 thymocyte8.36e-086
DN1 thymic pro-T cell8.36e-086
DN2 thymocyte8.36e-086
DN3 thymocyte8.36e-086
immature single positive thymocyte8.36e-086
early T lineage precursor8.36e-086
mature CD4 single-positive thymocyte8.36e-086
resting double-positive thymocyte8.36e-086
double-positive blast8.36e-086
CD69-positive double-positive thymocyte8.36e-086
CD69-positive, CD4-positive single-positive thymocyte8.36e-086
CD4-positive, CD8-intermediate double-positive thymocyte8.36e-086
CD24-positive, CD4 single-positive thymocyte8.36e-086
lymphoid lineage restricted progenitor cell8.44e-0812
lymphocyte3.81e-0713
common lymphoid progenitor3.81e-0713

Uber anatomy
Ontology termp-valuen
thymus5.23e-1523
neck5.23e-1523
respiratory system epithelium5.23e-1523
hemolymphoid system gland5.23e-1523
pharyngeal epithelium5.23e-1523
thymic region5.23e-1523
pharyngeal gland5.23e-1523
entire pharyngeal arch endoderm5.23e-1523
thymus primordium5.23e-1523
early pharyngeal endoderm5.23e-1523
pharynx2.82e-1424
gland of gut2.82e-1424
upper respiratory tract2.82e-1424
chordate pharynx2.82e-1424
pharyngeal arch system2.82e-1424
pharyngeal region of foregut2.82e-1424
hemopoietic organ2.58e-1329
immune organ2.58e-1329
segment of respiratory tract2.09e-1227
mixed endoderm/mesoderm-derived structure1.48e-1035
respiratory tract4.42e-1041
respiratory system9.05e-1042
hemolymphoid system1.42e-0948
immune system1.42e-0948
hematopoietic system4.97e-0945
blood island4.97e-0945
craniocervical region1.12e-0836
unilaminar epithelium3.14e-0766
anterior region of body7.21e-0743
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