FFCP PHASE1:Mm9::chr2:66279206..66279219,-: Difference between revisions
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{{FFCP|EntrezGene=20265|HGNC=|MCL_coexpression_id=237|UniProt=A2APX9|association_with_transcript=-309bp_to_ENSMUST00000138910_5end|description=CAGE_peak_3_at_Scn1a_5end|id=chr2:66279206..66279219,-|ontology_enrichment_celltype=CL:0000117!8.72e-08!23;CL:0000337!8.72e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.68e-11,23;CL:0000337,8.68e-11,23;CL:0002610,8.49e-10,3;CL:0002614,1.92e-08,3;CL:0000540,6.44e-07,33;CL:0000047,6.44e-07,33;CL:0000031,6.44e-07,33;CL:0000404,6.44e-07,33;CL:0002611,7.65e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.69e-23!52;UBERON:0005068!7.69e-23!52;UBERON:0006241!7.69e-23!52;UBERON:0007135!7.69e-23!52;UBERON:0000955!1.43e-20!50;UBERON:0006238!1.43e-20!50;UBERON:0002616!1.40e-19!49;UBERON:0000033!1.03e-18!63;UBERON:0000073!1.43e-18!75;UBERON:0001016!1.43e-18!75;UBERON:0001017!2.14e-18!73;UBERON:0005743!2.14e-18!73;UBERON:0002020!8.29e-18!34;UBERON:0002346!6.31e-17!71;UBERON:0003075!6.31e-17!71;UBERON:0007284!6.31e-17!71;UBERON:0004121!1.03e-13!102;UBERON:0000924!1.03e-13!102;UBERON:0006601!1.03e-13!102;UBERON:0007811!2.46e-13!86;UBERON:0003080!2.58e-13!40;UBERON:0002021!7.50e-13!10;UBERON:0000411!7.50e-13!10;UBERON:0001950!7.50e-13!10;UBERON:0003056!1.55e-12!49;UBERON:0002780!2.54e-12!39;UBERON:0001890!2.54e-12!39;UBERON:0006240!2.54e-12!39;UBERON:0002791!3.17e-12!29;UBERON:0003528!3.17e-12!29;UBERON:0001893!3.17e-12!29;UBERON:0000153!3.01e-11!94;UBERON:0003076!3.09e-11!12;UBERON:0003057!3.09e-11!12;UBERON:0002619!1.65e-09!17;UBERON:0002240!2.71e-09!6;UBERON:0005174!2.71e-09!6;UBERON:0001137!2.71e-09!6;UBERON:0002298!5.40e-09!6;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0001948!5.08e-08!5;UBERON:0002315!5.08e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.40e-37,54;UBERON:0001049,1.60e-32,52;UBERON:0005068,1.60e-32,52;UBERON:0006241,1.60e-32,52;UBERON:0007135,1.60e-32,52;UBERON:0001017,3.20e-30,73;UBERON:0001016,2.97e-29,75;UBERON:0002346,2.32e-25,64;UBERON:0003075,2.32e-25,64;UBERON:0007284,2.32e-25,64;UBERON:0000955,1.08e-24,47;UBERON:0006238,1.08e-24,47;UBERON:0002020,3.08e-24,34;UBERON:0002021,7.95e-24,10;UBERON:0000411,7.95e-24,10;UBERON:0001950,7.95e-24,10;UBERON:0002616,5.05e-23,46;UBERON:0004121,8.24e-22,95;UBERON:0000924,8.24e-22,95;UBERON:0006601,8.24e-22,95;UBERON:0010371,1.57e-21,73;UBERON:0003076,7.92e-18,12;UBERON:0003057,7.92e-18,12;UBERON:0003080,2.48e-17,40;UBERON:0003528,8.54e-17,29;UBERON:0002791,8.54e-17,29;UBERON:0001893,8.54e-17,29;UBERON:0002619,3.88e-16,17;UBERON:0010314,6.73e-16,92;UBERON:0002780,1.20e-15,39;UBERON:0001890,1.20e-15,39;UBERON:0006240,1.20e-15,39;UBERON:0000956,3.24e-15,21;UBERON:0001869,3.24e-15,21;UBERON:0000203,3.24e-15,21;UBERON:0003056,2.03e-13,49;UBERON:0002240,2.25e-12,6;UBERON:0005174,2.25e-12,6;UBERON:0001137,2.25e-12,6;UBERON:0000025,1.02e-11,114;UBERON:0002950,5.71e-11,4;UBERON:0001891,5.71e-11,4;UBERON:0009616,5.71e-11,4;UBERON:0010286,5.71e-11,4;UBERON:0004111,1.43e-10,122;UBERON:0001948,6.16e-10,5;UBERON:0002315,6.16e-10,5;UBERON:0004684,8.49e-10,3;UBERON:0002275,8.49e-10,3;UBERON:0002038,1.92e-08,3;UBERON:0009663,1.92e-08,3;UBERON:0009661,1.92e-08,3;UBERON:0000125,1.92e-08,3;UBERON:0002308,1.92e-08,3;UBERON:0011216,2.93e-08,194;UBERON:0004733,2.44e-07,6;UBERON:0004732,2.44e-07,6;UBERON:0002028,2.44e-07,6;UBERON:0007277,2.44e-07,6;UBERON:0001896,7.17e-07,2;UBERON:0002298,7.17e-07,2;UBERON:0005290,7.17e-07,2;UBERON:0010096,7.17e-07,2;UBERON:0002256,7.65e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56952953211411,6.62605622854841,0,0,0,11.0115880999389,11.8749224419225,9.67721159514334,0.131886287730194,0.182975287204819,0,4.18774498502071,2.8138130501584,2.90316670775939,13.258286346315,15.6608848879013,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,6.5907881338122,0.457500602818626,0,3.12883776346098,3.06858548796397,6.64921742590592,5.84068547043927,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,7.2671245687166,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,1.14579102687879,5.15559547031063,4.11049511862385,2.2661816921691,2.02506750069542,3.60256962579376,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0,0,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.237270036248348,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.927471342481686|short_description=p3@Scn1a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20265 | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|TSSclassifier=NA | |||
|UniProt=A2APX9 | |||
|association_with_transcript=-309bp_to_ENSMUST00000138910_5end | |||
|cluster_id=chr2:66279206..66279219,- | |||
|description=CAGE_peak_3_at_Scn1a_5end | |||
|id=chr2:66279206..66279219,- | |||
|ontology_enrichment_celltype=CL:0000117!8.72e-08!23;CL:0000337!8.72e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.68e-11,23;CL:0000337,8.68e-11,23;CL:0002610,8.49e-10,3;CL:0002614,1.92e-08,3;CL:0000540,6.44e-07,33;CL:0000047,6.44e-07,33;CL:0000031,6.44e-07,33;CL:0000404,6.44e-07,33;CL:0002611,7.65e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.69e-23!52;UBERON:0005068!7.69e-23!52;UBERON:0006241!7.69e-23!52;UBERON:0007135!7.69e-23!52;UBERON:0000955!1.43e-20!50;UBERON:0006238!1.43e-20!50;UBERON:0002616!1.40e-19!49;UBERON:0000033!1.03e-18!63;UBERON:0000073!1.43e-18!75;UBERON:0001016!1.43e-18!75;UBERON:0001017!2.14e-18!73;UBERON:0005743!2.14e-18!73;UBERON:0002020!8.29e-18!34;UBERON:0002346!6.31e-17!71;UBERON:0003075!6.31e-17!71;UBERON:0007284!6.31e-17!71;UBERON:0004121!1.03e-13!102;UBERON:0000924!1.03e-13!102;UBERON:0006601!1.03e-13!102;UBERON:0007811!2.46e-13!86;UBERON:0003080!2.58e-13!40;UBERON:0002021!7.50e-13!10;UBERON:0000411!7.50e-13!10;UBERON:0001950!7.50e-13!10;UBERON:0003056!1.55e-12!49;UBERON:0002780!2.54e-12!39;UBERON:0001890!2.54e-12!39;UBERON:0006240!2.54e-12!39;UBERON:0002791!3.17e-12!29;UBERON:0003528!3.17e-12!29;UBERON:0001893!3.17e-12!29;UBERON:0000153!3.01e-11!94;UBERON:0003076!3.09e-11!12;UBERON:0003057!3.09e-11!12;UBERON:0002619!1.65e-09!17;UBERON:0002240!2.71e-09!6;UBERON:0005174!2.71e-09!6;UBERON:0001137!2.71e-09!6;UBERON:0002298!5.40e-09!6;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0001948!5.08e-08!5;UBERON:0002315!5.08e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.40e-37,54;UBERON:0001049,1.60e-32,52;UBERON:0005068,1.60e-32,52;UBERON:0006241,1.60e-32,52;UBERON:0007135,1.60e-32,52;UBERON:0001017,3.20e-30,73;UBERON:0001016,2.97e-29,75;UBERON:0002346,2.32e-25,64;UBERON:0003075,2.32e-25,64;UBERON:0007284,2.32e-25,64;UBERON:0000955,1.08e-24,47;UBERON:0006238,1.08e-24,47;UBERON:0002020,3.08e-24,34;UBERON:0002021,7.95e-24,10;UBERON:0000411,7.95e-24,10;UBERON:0001950,7.95e-24,10;UBERON:0002616,5.05e-23,46;UBERON:0004121,8.24e-22,95;UBERON:0000924,8.24e-22,95;UBERON:0006601,8.24e-22,95;UBERON:0010371,1.57e-21,73;UBERON:0003076,7.92e-18,12;UBERON:0003057,7.92e-18,12;UBERON:0003080,2.48e-17,40;UBERON:0003528,8.54e-17,29;UBERON:0002791,8.54e-17,29;UBERON:0001893,8.54e-17,29;UBERON:0002619,3.88e-16,17;UBERON:0010314,6.73e-16,92;UBERON:0002780,1.20e-15,39;UBERON:0001890,1.20e-15,39;UBERON:0006240,1.20e-15,39;UBERON:0000956,3.24e-15,21;UBERON:0001869,3.24e-15,21;UBERON:0000203,3.24e-15,21;UBERON:0003056,2.03e-13,49;UBERON:0002240,2.25e-12,6;UBERON:0005174,2.25e-12,6;UBERON:0001137,2.25e-12,6;UBERON:0000025,1.02e-11,114;UBERON:0002950,5.71e-11,4;UBERON:0001891,5.71e-11,4;UBERON:0009616,5.71e-11,4;UBERON:0010286,5.71e-11,4;UBERON:0004111,1.43e-10,122;UBERON:0001948,6.16e-10,5;UBERON:0002315,6.16e-10,5;UBERON:0004684,8.49e-10,3;UBERON:0002275,8.49e-10,3;UBERON:0002038,1.92e-08,3;UBERON:0009663,1.92e-08,3;UBERON:0009661,1.92e-08,3;UBERON:0000125,1.92e-08,3;UBERON:0002308,1.92e-08,3;UBERON:0011216,2.93e-08,194;UBERON:0004733,2.44e-07,6;UBERON:0004732,2.44e-07,6;UBERON:0002028,2.44e-07,6;UBERON:0007277,2.44e-07,6;UBERON:0001896,7.17e-07,2;UBERON:0002298,7.17e-07,2;UBERON:0005290,7.17e-07,2;UBERON:0010096,7.17e-07,2;UBERON:0002256,7.65e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56952953211411,6.62605622854841,0,0,0,11.0115880999389,11.8749224419225,9.67721159514334,0.131886287730194,0.182975287204819,0,4.18774498502071,2.8138130501584,2.90316670775939,13.258286346315,15.6608848879013,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,6.5907881338122,0.457500602818626,0,3.12883776346098,3.06858548796397,6.64921742590592,5.84068547043927,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94405927989778,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,7.2671245687166,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,1.14579102687879,5.15559547031063,4.11049511862385,2.2661816921691,2.02506750069542,3.60256962579376,1.81256963593682,1.55328093525546,0,0,0,0,0,0,0,0,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.354951612318675,0,0,0.188218760830661,0.507687647350059,0.365855945745545,0.263069711437843,0.543216455383447,0,0.237270036248348,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.927471342481686 | |||
|short_description=p3@Scn1a | |||
}} |
Latest revision as of 20:53, 26 September 2015
Short description: | p3@Scn1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scn1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | -309bp_to_ENSMUST00000138910_5end |
EntrezGene: | Scn1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.68e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.68e-11 | 23 |
raphe nuclei neuron | 8.49e-10 | 3 |
neuron of the substantia nigra | 1.92e-08 | 3 |
neuron | 6.44e-07 | 33 |
neuronal stem cell | 6.44e-07 | 33 |
neuroblast | 6.44e-07 | 33 |
electrically signaling cell | 6.44e-07 | 33 |
neuron of the dorsal spinal cord | 7.65e-07 | 2 |