FFCP PHASE1:Mm9::chr12:80204900..80204937,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110417 | |EntrezGene=110417 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=27 | |MCL_coexpression_id=27 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc007nzu.1_5end | |association_with_transcript=0bp_to_uc007nzu.1_5end | ||
|cluster_id=chr12:80204900..80204937,- | |||
|description=CAGE_peak_4_at_Pigh_5end | |description=CAGE_peak_4_at_Pigh_5end | ||
|id=chr12:80204900..80204937,- | |id=chr12:80204900..80204937,- | ||
|ontology_enrichment_celltype=CL:0002563!2.37e-09!9;CL:0002251!2.37e-09!9 | |ontology_enrichment_celltype=CL:0002563!2.37e-09!9;CL:0002251!2.37e-09!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.02e-14,9;CL:0002251,7.02e-14,9;CL:0000239,2.66e-09,6;CL:0000677,2.66e-09,6;CL:0000584,2.66e-09,6;CL:0000075,7.71e-08,7;CL:0002076,1.72e-07,15;CL:0000066,4.48e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.31e-27!43;UBERON:0005409!6.43e-26!59;UBERON:0001007!1.82e-15!128;UBERON:0001555!1.82e-15!128;UBERON:0007026!1.82e-15!128;UBERON:0004119!6.67e-15!130;UBERON:0000925!6.67e-15!130;UBERON:0006595!6.67e-15!130;UBERON:0000344!2.75e-14!15;UBERON:0004921!3.53e-14!126;UBERON:0004185!3.53e-14!126;UBERON:0001242!1.45e-12!13;UBERON:0000060!1.45e-12!13;UBERON:0001262!1.45e-12!13;UBERON:0004786!1.45e-12!13;UBERON:0002108!5.60e-11!16;UBERON:0003350!2.37e-09!9;UBERON:0004808!2.37e-09!9;UBERON:0001277!2.37e-09!9;UBERON:0001045!8.56e-09!13;UBERON:0004923!3.19e-08!24;UBERON:0001264!4.75e-08!12;UBERON:0003922!4.75e-08!12;UBERON:0002114!4.75e-08!12;UBERON:0003923!4.75e-08!12;UBERON:0003924!4.75e-08!12;UBERON:0003921!4.75e-08!12;UBERON:0000485!4.12e-07!11;UBERON:0007023!7.76e-07!51 | |ontology_enrichment_uberon=UBERON:0000160!3.31e-27!43;UBERON:0005409!6.43e-26!59;UBERON:0001007!1.82e-15!128;UBERON:0001555!1.82e-15!128;UBERON:0007026!1.82e-15!128;UBERON:0004119!6.67e-15!130;UBERON:0000925!6.67e-15!130;UBERON:0006595!6.67e-15!130;UBERON:0000344!2.75e-14!15;UBERON:0004921!3.53e-14!126;UBERON:0004185!3.53e-14!126;UBERON:0001242!1.45e-12!13;UBERON:0000060!1.45e-12!13;UBERON:0001262!1.45e-12!13;UBERON:0004786!1.45e-12!13;UBERON:0002108!5.60e-11!16;UBERON:0003350!2.37e-09!9;UBERON:0004808!2.37e-09!9;UBERON:0001277!2.37e-09!9;UBERON:0001045!8.56e-09!13;UBERON:0004923!3.19e-08!24;UBERON:0001264!4.75e-08!12;UBERON:0003922!4.75e-08!12;UBERON:0002114!4.75e-08!12;UBERON:0003923!4.75e-08!12;UBERON:0003924!4.75e-08!12;UBERON:0003921!4.75e-08!12;UBERON:0000485!4.12e-07!11;UBERON:0007023!7.76e-07!51 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.50e-26,31;UBERON:0005409,3.61e-22,47;UBERON:0000344,1.08e-21,15;UBERON:0001242,5.78e-19,13;UBERON:0001262,5.78e-19,13;UBERON:0004786,5.78e-19,13;UBERON:0004923,5.25e-14,24;UBERON:0003350,7.02e-14,9;UBERON:0004808,7.02e-14,9;UBERON:0001277,7.02e-14,9;UBERON:0001264,1.83e-12,12;UBERON:0000485,5.77e-11,11;UBERON:0007023,3.78e-09,51;UBERON:0001007,1.76e-07,116;UBERON:0001555,1.76e-07,116;UBERON:0007026,1.76e-07,116;UBERON:0004119,3.28e-07,118;UBERON:0000925,3.28e-07,118;UBERON:0006595,3.28e-07,118;UBERON:0002075,5.60e-07,19 | |||
|phase1_expression=0,3.14077866875425,7.27998783023258,5.14189159221611,3.00537437967808,5.37213670118047,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.75972722056264,4.35877634027623,5.16808767703518,6.8921919385452,6.89507944594845,5.13063232532209,2.77233142735924,2.88249663851896,0,0,0,8.08784535303569,8.81043620400009,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0,0,11.8653584512499,0,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.305518091550949,2.11491850037158,11.1198013710817,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,8.92130714056255,3.96675849995316,0,0,0,0.605050573870028,0.444756087689741,0.380451252225118,2.84717436926707,1.4822905925161,2.5133520880027,1.79060824837036,1.16978452271472,5.39291645192533,7.13255564586491,12.1476176685164,0,0,0,0,0.193952487167626,0.49095073923223,0.316182685621286,0.738050739898011,0.156998727841375,1.23397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0,0,0.655453258862952,0,0.578596234326046,0,0,1.96705709207614,2.20749397043786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,1.31976098378028,19.9117707509944,0,0,3.77210159511796,7.08724542913855,4.61152721915891,3.6179961043551,2.90826983582004,4.27796854061666,19.9103157499564,8.4334886859999,12.3762651897824,1.02131881726136,0,0,0,0,0.891844088010353,1.15184314421485,1.522324745573,0,0,42.3414524265527,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.324016022465404,1.46361807210128,0.436725127492355,0.944050424693745,1.90102948168273,2.35580347785627,5.31421390496351,2.4853572523477,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.965947970160952,0.187682475451182,2.38097111547445,0,19.5613120573792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,3.14077866875425,7.27998783023258,5.14189159221611,3.00537437967808,5.37213670118047,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.75972722056264,4.35877634027623,5.16808767703518,6.8921919385452,6.89507944594845,5.13063232532209,2.77233142735924,2.88249663851896,0,0,0,8.08784535303569,8.81043620400009,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0.649776417447669,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0,0,11.8653584512499,0,0,0,0,0,3.72783522436244,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0.305518091550949,2.11491850037158,11.1198013710817,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,8.92130714056255,3.96675849995316,0,0,0,0.605050573870028,0.444756087689741,0.380451252225118,2.84717436926707,1.4822905925161,2.5133520880027,1.79060824837036,1.16978452271472,5.39291645192533,7.13255564586491,12.1476176685164,0,0,0,0,0.193952487167626,0.49095073923223,0.316182685621286,0.738050739898011,0.156998727841375,1.23397163921801,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.157635144106191,0,0,0.655453258862952,0,0.578596234326046,0,0,1.96705709207614,2.20749397043786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0,0,1.31976098378028,19.9117707509944,0,0,3.77210159511796,7.08724542913855,4.61152721915891,3.6179961043551,2.90826983582004,4.27796854061666,19.9103157499564,8.4334886859999,12.3762651897824,1.02131881726136,0,0,0,0,0.891844088010353,1.15184314421485,1.522324745573,0,0,42.3414524265527,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0.324016022465404,1.46361807210128,0.436725127492355,0.944050424693745,1.90102948168273,2.35580347785627,5.31421390496351,2.4853572523477,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,1.36038230169127,0,0,0,0.965947970160952,0.187682475451182,2.38097111547445,0,19.5613120573792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p4@Pigh | |short_description=p4@Pigh | ||
}} | }} |
Latest revision as of 20:32, 26 September 2015
Short description: | p4@Pigh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pigh_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | 0bp_to_uc007nzu.1_5end |
EntrezGene: | Pigh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.02e-14 | 9 |
epithelial cell of alimentary canal | 7.02e-14 | 9 |
brush border epithelial cell | 2.66e-09 | 6 |
gut absorptive cell | 2.66e-09 | 6 |
enterocyte | 2.66e-09 | 6 |
columnar/cuboidal epithelial cell | 7.71e-08 | 7 |
endo-epithelial cell | 1.72e-07 | 15 |
epithelial cell | 4.48e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.50e-26 | 31 |
gastrointestinal system | 3.61e-22 | 47 |
mucosa | 1.08e-21 | 15 |
intestinal mucosa | 5.78e-19 | 13 |
wall of intestine | 5.78e-19 | 13 |
gastrointestinal system mucosa | 5.78e-19 | 13 |
organ component layer | 5.25e-14 | 24 |
epithelium of mucosa | 7.02e-14 | 9 |
gastrointestinal system epithelium | 7.02e-14 | 9 |
intestinal epithelium | 7.02e-14 | 9 |
pancreas | 1.83e-12 | 12 |
simple columnar epithelium | 5.77e-11 | 11 |
adult organism | 3.78e-09 | 51 |
digestive system | 1.76e-07 | 116 |
digestive tract | 1.76e-07 | 116 |
primitive gut | 1.76e-07 | 116 |
endoderm-derived structure | 3.28e-07 | 118 |
endoderm | 3.28e-07 | 118 |
presumptive endoderm | 3.28e-07 | 118 |
viscus | 5.60e-07 | 19 |