FFCP PHASE1:Mm9::chr6:136730239..136730327,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14917 | |EntrezGene=14917 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UWA6 | |UniProt=Q3UWA6 | ||
|association_with_transcript=0bp_to_ENSMUST00000032338,ENSMUST00000078095,NM_001127318,NM_145067,uc009emb.2,uc009emc.2_5end | |association_with_transcript=0bp_to_ENSMUST00000032338,ENSMUST00000078095,NM_001127318,NM_145067,uc009emb.2,uc009emc.2_5end | ||
|cluster_id=chr6:136730239..136730327,- | |||
|description=CAGE_peak_1_at_Gucy2c_5end | |description=CAGE_peak_1_at_Gucy2c_5end | ||
|id=chr6:136730239..136730327,- | |id=chr6:136730239..136730327,- | ||
|ontology_enrichment_celltype=CL:0002563!1.79e-08!9;CL:0002251!1.79e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.79e-08!9;CL:0002251!1.79e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.15e-10,9;CL:0002251,3.15e-10,9;CL:0000239,8.29e-08,6;CL:0000677,8.29e-08,6;CL:0000584,8.29e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.06e-22!43;UBERON:0005409!8.79e-21!59;UBERON:0000344!1.68e-13!15;UBERON:0001007!2.61e-12!128;UBERON:0001555!2.61e-12!128;UBERON:0007026!2.61e-12!128;UBERON:0004119!2.93e-12!130;UBERON:0000925!2.93e-12!130;UBERON:0006595!2.93e-12!130;UBERON:0001242!7.91e-12!13;UBERON:0000060!7.91e-12!13;UBERON:0001262!7.91e-12!13;UBERON:0004786!7.91e-12!13;UBERON:0004921!3.49e-11!126;UBERON:0004185!3.49e-11!126;UBERON:0003350!1.79e-08!9;UBERON:0004808!1.79e-08!9;UBERON:0001277!1.79e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.21e-31,31;UBERON:0005409,6.57e-26,47;UBERON:0000344,1.59e-16,15;UBERON:0001242,1.99e-14,13;UBERON:0001262,1.99e-14,13;UBERON:0004786,1.99e-14,13;UBERON:0001007,1.11e-11,116;UBERON:0001555,1.11e-11,116;UBERON:0007026,1.11e-11,116;UBERON:0004119,3.32e-11,118;UBERON:0000925,3.32e-11,118;UBERON:0006595,3.32e-11,118;UBERON:0004921,1.98e-10,114;UBERON:0003350,3.15e-10,9;UBERON:0004808,3.15e-10,9;UBERON:0001277,3.15e-10,9;UBERON:0004923,2.92e-08,24;UBERON:0000485,7.67e-08,11 | |||
|phase1_expression=0,309.890161983753,277.094536788227,311.235673434728,323.077745815394,127.252488109212,93.4450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.392498565473,166.780547335833,237.157801179503,194.273660267743,145.874024528347,199.524590429193,194.315230044907,140.133682734153,0,0,0,79.7230470513518,61.1743494919252,80.6468957236358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.383062014255563,1.68967186581868,0.395658863190582,0.182975287204819,0,0.837548997004143,1.68828783009504,1.06958773443767,0,0,0,0,0,0,0,4.0798280022465,1.07940638327563,2.59910566979068,0.448026887097336,13.4826643326482,0,0,0,0,0,0,0,0,0,0,26.3764762151029,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,102.515468669967,0,0,140.756837419934,0,0,0,0,0,0,0,0,1.45451631191692,0.811206315338788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.676028777934,157.612537731472,3.62590025909898,9.0572302025571,38.1447685513396,72.6060688644033,94.5106686340699,97.7759718218554,147.578538140343,164.369556814563,119.384224180128,113.803102007538,98.2618999080366,142.013466567367,146.325459765168,185.798807946325,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,1.77871576252289,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,1.52775511068852,1.72617682470486,3.40483976227574,1.37280706594041,2.87536413054709,1.86070473834252,2.49630138491648,2.27320990152401,1.07638448113147,7.71909634181387,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.51161778482376,0.377210159511796,1.18120757152309,0.307435147943927,40.3148137342425,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0,0.16488625294148,0,0,0.596861720015682,1.47726809770555,141.951167438737,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,2.03319467126849,11.5565714679327,2.92723614420256,7.20596460362386,2.42755823492677,1.65306911450672,0.523511883968059,152.55682356444,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.972426868273176,0,1.83843508450014,4.88942801163553,2.88449080134452,6.4183841918363,5.81203587056734,5.57654459758527,4.52703219326583,3.7456602987953,4.8018864303652,6.03072424033939,4.76293691283074,3.70829843023538,5.40145817298374,8.24171801606613,4.85756436443511,4.4573002810104,3.19456451086807,5.00715998889374,4.65108533223451,4.14081273827455,6.17686637609238,5.67076715905595,6.57674278594607,4.34573164306758,5.05028044491965,5.45721083371201,4.62971067165148,5.32000356120596,6.19747364743864,5.98010494041538,0,4.67863216890817,7.95022899978704,0.57386499620653,0,0 | |phase1_expression=0,309.890161983753,277.094536788227,311.235673434728,323.077745815394,127.252488109212,93.4450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,158.392498565473,166.780547335833,237.157801179503,194.273660267743,145.874024528347,199.524590429193,194.315230044907,140.133682734153,0,0,0,79.7230470513518,61.1743494919252,80.6468957236358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.383062014255563,1.68967186581868,0.395658863190582,0.182975287204819,0,0.837548997004143,1.68828783009504,1.06958773443767,0,0,0,0,0,0,0,4.0798280022465,1.07940638327563,2.59910566979068,0.448026887097336,13.4826643326482,0,0,0,0,0,0,0,0,0,0,26.3764762151029,0,0,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.161766849947409,0,0,102.515468669967,0,0,140.756837419934,0,0,0,0,0,0,0,0,1.45451631191692,0.811206315338788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,225.676028777934,157.612537731472,3.62590025909898,9.0572302025571,38.1447685513396,72.6060688644033,94.5106686340699,97.7759718218554,147.578538140343,164.369556814563,119.384224180128,113.803102007538,98.2618999080366,142.013466567367,146.325459765168,185.798807946325,0,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0,0,0,1.77871576252289,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,1.52775511068852,1.72617682470486,3.40483976227574,1.37280706594041,2.87536413054709,1.86070473834252,2.49630138491648,2.27320990152401,1.07638448113147,7.71909634181387,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,1.51161778482376,0.377210159511796,1.18120757152309,0.307435147943927,40.3148137342425,0.363533729477506,0,0,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0,0,0.469343416127421,0,0,0.16488625294148,0,0,0.596861720015682,1.47726809770555,141.951167438737,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,2.03319467126849,11.5565714679327,2.92723614420256,7.20596460362386,2.42755823492677,1.65306911450672,0.523511883968059,152.55682356444,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.972426868273176,0,1.83843508450014,4.88942801163553,2.88449080134452,6.4183841918363,5.81203587056734,5.57654459758527,4.52703219326583,3.7456602987953,4.8018864303652,6.03072424033939,4.76293691283074,3.70829843023538,5.40145817298374,8.24171801606613,4.85756436443511,4.4573002810104,3.19456451086807,5.00715998889374,4.65108533223451,4.14081273827455,6.17686637609238,5.67076715905595,6.57674278594607,4.34573164306758,5.05028044491965,5.45721083371201,4.62971067165148,5.32000356120596,6.19747364743864,5.98010494041538,0,4.67863216890817,7.95022899978704,0.57386499620653,0,0 | ||
|short_description=p1@Gucy2c | |short_description=p1@Gucy2c | ||
}} | }} |
Latest revision as of 20:22, 26 September 2015
Short description: | p1@Gucy2c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gucy2c_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000032338, ENSMUST00000078095, NM_001127318, NM_145067, uc009emb.2, uc009emc.2_5end |
EntrezGene: | Gucy2c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.15e-10 | 9 |
epithelial cell of alimentary canal | 3.15e-10 | 9 |
brush border epithelial cell | 8.29e-08 | 6 |
gut absorptive cell | 8.29e-08 | 6 |
enterocyte | 8.29e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.21e-31 | 31 |
gastrointestinal system | 6.57e-26 | 47 |
mucosa | 1.59e-16 | 15 |
intestinal mucosa | 1.99e-14 | 13 |
wall of intestine | 1.99e-14 | 13 |
gastrointestinal system mucosa | 1.99e-14 | 13 |
digestive system | 1.11e-11 | 116 |
digestive tract | 1.11e-11 | 116 |
primitive gut | 1.11e-11 | 116 |
endoderm-derived structure | 3.32e-11 | 118 |
endoderm | 3.32e-11 | 118 |
presumptive endoderm | 3.32e-11 | 118 |
subdivision of digestive tract | 1.98e-10 | 114 |
epithelium of mucosa | 3.15e-10 | 9 |
gastrointestinal system epithelium | 3.15e-10 | 9 |
intestinal epithelium | 3.15e-10 | 9 |
organ component layer | 2.92e-08 | 24 |
simple columnar epithelium | 7.67e-08 | 11 |