FFCP PHASE1:Mm9::chr12:74040750..74040762,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75801 | |EntrezGene=75801 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=492 | |MCL_coexpression_id=492 | ||
|TSSclassifier=NA | |||
|UniProt=D3YZ78 | |UniProt=D3YZ78 | ||
|association_with_transcript=307bp_to_ENSMUST00000132067,uc007nvx.1_5end | |association_with_transcript=307bp_to_ENSMUST00000132067,uc007nvx.1_5end | ||
|cluster_id=chr12:74040750..74040762,- | |||
|description=CAGE_peak_3_at_4930447C04Rik_5end | |description=CAGE_peak_3_at_4930447C04Rik_5end | ||
|id=chr12:74040750..74040762,- | |id=chr12:74040750..74040762,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.74e-34!9;UBERON:0000019!4.74e-34!9;UBERON:0000047!4.74e-34!9;UBERON:0004088!4.74e-34!9;UBERON:0002104!4.74e-34!9;UBERON:0001456!4.74e-34!9;UBERON:0003072!4.74e-34!9;UBERON:0003071!4.74e-34!9;UBERON:0004128!4.74e-34!9;UBERON:0000007!1.07e-29!8;UBERON:0003296!1.07e-29!8;UBERON:0010133!1.07e-29!8;UBERON:0001444!1.31e-27!11;UBERON:0000020!3.41e-25!12;UBERON:0001032!3.41e-25!12;UBERON:0004456!3.41e-25!12;UBERON:0001894!1.52e-23!10;UBERON:0006222!1.52e-23!10;UBERON:0005085!3.79e-23!13;UBERON:0003056!7.06e-20!49;UBERON:0000033!9.36e-15!63;UBERON:0002346!9.88e-13!71;UBERON:0003075!9.88e-13!71;UBERON:0007284!9.88e-13!71;UBERON:0007811!5.99e-10!86;UBERON:0000153!7.94e-09!94;UBERON:0004121!7.02e-08!102;UBERON:0000924!7.02e-08!102;UBERON:0006601!7.02e-08!102 | |ontology_enrichment_uberon=UBERON:0000970!4.74e-34!9;UBERON:0000019!4.74e-34!9;UBERON:0000047!4.74e-34!9;UBERON:0004088!4.74e-34!9;UBERON:0002104!4.74e-34!9;UBERON:0001456!4.74e-34!9;UBERON:0003072!4.74e-34!9;UBERON:0003071!4.74e-34!9;UBERON:0004128!4.74e-34!9;UBERON:0000007!1.07e-29!8;UBERON:0003296!1.07e-29!8;UBERON:0010133!1.07e-29!8;UBERON:0001444!1.31e-27!11;UBERON:0000020!3.41e-25!12;UBERON:0001032!3.41e-25!12;UBERON:0004456!3.41e-25!12;UBERON:0001894!1.52e-23!10;UBERON:0006222!1.52e-23!10;UBERON:0005085!3.79e-23!13;UBERON:0003056!7.06e-20!49;UBERON:0000033!9.36e-15!63;UBERON:0002346!9.88e-13!71;UBERON:0003075!9.88e-13!71;UBERON:0007284!9.88e-13!71;UBERON:0007811!5.99e-10!86;UBERON:0000153!7.94e-09!94;UBERON:0004121!7.02e-08!102;UBERON:0000924!7.02e-08!102;UBERON:0006601!7.02e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.41e-44,9;UBERON:0000019,2.41e-44,9;UBERON:0000047,2.41e-44,9;UBERON:0010312,2.41e-44,9;UBERON:0004088,2.41e-44,9;UBERON:0002104,2.41e-44,9;UBERON:0001456,2.41e-44,9;UBERON:0003072,2.41e-44,9;UBERON:0004128,2.41e-44,9;UBERON:0003071,2.41e-44,9;UBERON:0001444,3.47e-36,11;UBERON:0000020,3.99e-33,12;UBERON:0001032,3.99e-33,12;UBERON:0004456,3.99e-33,12;UBERON:0000033,1.56e-30,13;UBERON:0005085,1.56e-30,13;UBERON:0000007,6.81e-28,8;UBERON:0003296,6.81e-28,8;UBERON:0010133,6.81e-28,8;UBERON:0003056,6.15e-24,49;UBERON:0001894,2.77e-22,10;UBERON:0006222,2.77e-22,10;UBERON:0002346,5.05e-18,64;UBERON:0003075,5.05e-18,64;UBERON:0007284,5.05e-18,64;UBERON:0010371,1.24e-15,73;UBERON:0010314,4.10e-12,92;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0007811,1.40e-10,36;UBERON:0000153,9.94e-09,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0.780722657776222,1.37941262660084,1.62055916824814,3.91832526372859,4.42237244483631,6.66191345481219,5.15359485078509,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42571487479924,0.900305470156551,0.646793418913773,2.7863814554107,3.3694644392032,1.60531935841864,1.64549020602121,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05220927943237,0.780722657776222,1.37941262660084,1.62055916824814,3.91832526372859,4.42237244483631,6.66191345481219,5.15359485078509,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42571487479924,0.900305470156551,0.646793418913773,2.7863814554107,3.3694644392032,1.60531935841864,1.64549020602121,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p3@4930447C04Rik | |short_description=p3@4930447C04Rik | ||
}} | }} |
Latest revision as of 18:27, 26 September 2015
Short description: | p3@4930447C04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_4930447C04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | 307bp_to_ENSMUST00000132067, uc007nvx.1_5end |
EntrezGene: | 4930447C04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.41e-44 | 9 |
camera-type eye | 2.41e-44 | 9 |
simple eye | 2.41e-44 | 9 |
immature eye | 2.41e-44 | 9 |
ocular region | 2.41e-44 | 9 |
visual system | 2.41e-44 | 9 |
face | 2.41e-44 | 9 |
optic cup | 2.41e-44 | 9 |
optic vesicle | 2.41e-44 | 9 |
eye primordium | 2.41e-44 | 9 |
subdivision of head | 3.47e-36 | 11 |
sense organ | 3.99e-33 | 12 |
sensory system | 3.99e-33 | 12 |
entire sense organ system | 3.99e-33 | 12 |
head | 1.56e-30 | 13 |
ectodermal placode | 1.56e-30 | 13 |
pituitary gland | 6.81e-28 | 8 |
gland of diencephalon | 6.81e-28 | 8 |
neuroendocrine gland | 6.81e-28 | 8 |
pre-chordal neural plate | 6.15e-24 | 49 |
diencephalon | 2.77e-22 | 10 |
future diencephalon | 2.77e-22 | 10 |
neurectoderm | 5.05e-18 | 64 |
neural plate | 5.05e-18 | 64 |
presumptive neural plate | 5.05e-18 | 64 |
ecto-epithelium | 1.24e-15 | 73 |
structure with developmental contribution from neural crest | 4.10e-12 | 92 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
craniocervical region | 1.40e-10 | 36 |
anterior region of body | 9.94e-09 | 43 |