FFCP PHASE1:Mm9::chr11:102006781..102006784,+: Difference between revisions
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|id=chr11:102006781..102006784,+
|short_description=p5@Nags
|description=CAGE_peak_5_at_Nags_5end
|association_with_transcript=-42bp_to_ENSMUST00000129799_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217214 | |EntrezGene=217214 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENSMUST00000129799_5end | |||
|cluster_id=chr11:102006781..102006784,+ | |||
|description=CAGE_peak_5_at_Nags_5end | |||
|id=chr11:102006781..102006784,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.70e-13!9;CL:0002251!1.70e-13!9;CL:0000239!2.43e-10!6;CL:0000677!2.43e-10!6;CL:0000212!2.43e-10!6;CL:0000584!2.43e-10!6;CL:0000066!1.96e-09!25;CL:0000075!1.11e-08!7;CL:0000223!2.00e-07!20;CL:0002076!3.63e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.49e-30,6;CL:0000677,2.49e-30,6;CL:0000584,2.49e-30,6;CL:0000075,5.92e-26,7;CL:0002563,4.13e-20,9;CL:0002251,4.13e-20,9;CL:0000066,3.29e-15,25;CL:0002076,6.65e-12,15;CL:0000223,9.24e-12,20;CL:0000682,1.42e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.82e-21!15;UBERON:0005409!7.44e-21!59;UBERON:0000160!2.81e-20!43;UBERON:0001242!9.52e-19!13;UBERON:0000060!9.52e-19!13;UBERON:0001262!9.52e-19!13;UBERON:0004786!9.52e-19!13;UBERON:0004923!2.58e-18!24;UBERON:0001007!4.32e-16!128;UBERON:0001555!4.32e-16!128;UBERON:0007026!4.32e-16!128;UBERON:0004119!1.24e-15!130;UBERON:0000925!1.24e-15!130;UBERON:0006595!1.24e-15!130;UBERON:0004921!2.05e-14!126;UBERON:0004185!2.05e-14!126;UBERON:0003350!1.70e-13!9;UBERON:0004808!1.70e-13!9;UBERON:0001277!1.70e-13!9;UBERON:0000485!1.32e-10!11;UBERON:0002107!2.82e-08!22;UBERON:0007499!2.82e-08!22;UBERON:0006925!2.82e-08!22;UBERON:0009497!2.82e-08!22;UBERON:0000015!2.82e-08!22;UBERON:0002423!2.82e-08!22;UBERON:0006235!2.82e-08!22;UBERON:0008835!2.82e-08!22;UBERON:0003894!2.82e-08!22;UBERON:0004161!2.82e-08!22;UBERON:0008836!2.82e-08!22;UBERON:0009854!9.01e-08!23;UBERON:0009856!9.01e-08!23;UBERON:0003929!1.44e-07!55;UBERON:0002365!6.87e-07!25;UBERON:0002330!6.87e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.58e-26,15;UBERON:0001242,2.92e-24,13;UBERON:0001262,2.92e-24,13;UBERON:0004786,2.92e-24,13;UBERON:0003350,4.13e-20,9;UBERON:0004808,4.13e-20,9;UBERON:0001277,4.13e-20,9;UBERON:0000485,2.19e-16,11;UBERON:0004923,5.10e-16,24;UBERON:0000160,5.64e-15,31;UBERON:0005409,2.17e-09,47;UBERON:0003929,2.67e-09,55;UBERON:0001007,1.10e-08,116;UBERON:0001555,1.10e-08,116;UBERON:0007026,1.10e-08,116;UBERON:0004119,1.69e-08,118;UBERON:0000925,1.69e-08,118;UBERON:0006595,1.69e-08,118;UBERON:0004921,1.32e-07,114;UBERON:0000490,1.78e-07,66;UBERON:0005911,4.44e-07,69 | |||
|phase1_expression=0,2.44282785347553,3.18499467572675,3.32710632437513,7.01254021924886,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,1.37645568640302,2.8711598205751,1.29228598847722,0.861884930743556,0.760093677825496,2.01624103807945,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0,1.42358718463353,1.31759163779209,0.251335208800269,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0.575392274901621,0.486405680325106,0,0,0,0,1.01031551178845,1.07638448113147,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0.648074866458964,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,2.44282785347553,3.18499467572675,3.32710632437513,7.01254021924886,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0.799962113967033,1.37645568640302,2.8711598205751,1.29228598847722,0.861884930743556,0.760093677825496,2.01624103807945,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,1.29955283489534,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.667134131534611,0,1.42358718463353,1.31759163779209,0.251335208800269,0.795825888164603,0.38992817423824,0,0.648414149624083,0.398282546508734,0,0.114248512609729,0,0,0,0,0,0,0,0,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.482354319504834,0,0.575392274901621,0.486405680325106,0,0,0,0,1.01031551178845,1.07638448113147,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0.648074866458964,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p5@Nags | |||
}} | }} |
Latest revision as of 17:57, 26 September 2015
Short description: | p5@Nags |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nags_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -42bp_to_ENSMUST00000129799_5end |
EntrezGene: | Nags |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.49e-30 | 6 |
gut absorptive cell | 2.49e-30 | 6 |
enterocyte | 2.49e-30 | 6 |
columnar/cuboidal epithelial cell | 5.92e-26 | 7 |
intestinal epithelial cell | 4.13e-20 | 9 |
epithelial cell of alimentary canal | 4.13e-20 | 9 |
epithelial cell | 3.29e-15 | 25 |
endo-epithelial cell | 6.65e-12 | 15 |
endodermal cell | 9.24e-12 | 20 |
M cell of gut | 1.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.58e-26 | 15 |
intestinal mucosa | 2.92e-24 | 13 |
wall of intestine | 2.92e-24 | 13 |
gastrointestinal system mucosa | 2.92e-24 | 13 |
epithelium of mucosa | 4.13e-20 | 9 |
gastrointestinal system epithelium | 4.13e-20 | 9 |
intestinal epithelium | 4.13e-20 | 9 |
simple columnar epithelium | 2.19e-16 | 11 |
organ component layer | 5.10e-16 | 24 |
intestine | 5.64e-15 | 31 |
gastrointestinal system | 2.17e-09 | 47 |
gut epithelium | 2.67e-09 | 55 |
digestive system | 1.10e-08 | 116 |
digestive tract | 1.10e-08 | 116 |
primitive gut | 1.10e-08 | 116 |
endoderm-derived structure | 1.69e-08 | 118 |
endoderm | 1.69e-08 | 118 |
presumptive endoderm | 1.69e-08 | 118 |
subdivision of digestive tract | 1.32e-07 | 114 |
unilaminar epithelium | 1.78e-07 | 66 |
endo-epithelium | 4.44e-07 | 69 |