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FFCP PHASE1:Mm9::chr7:4642362..4642380,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381979
|EntrezGene=381979
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q5RJI5
|UniProt=Q5RJI5
|association_with_transcript=-149bp_to_ENSMUST00000048248,NM_001003920,NM_001168572,uc009eye.1,uc009eyf.1_5end
|association_with_transcript=-149bp_to_ENSMUST00000048248,NM_001003920,NM_001168572,uc009eye.1,uc009eyf.1_5end
|cluster_id=chr7:4642362..4642380,+
|description=CAGE_peak_3_at_Brsk1_5end
|description=CAGE_peak_3_at_Brsk1_5end
|id=chr7:4642362..4642380,+
|id=chr7:4642362..4642380,+
|ontology_enrichment_celltype=CL:0000117!1.71e-16!23;CL:0000337!1.71e-16!23;CL:0000221!2.97e-16!44;CL:0000133!2.97e-16!44;CL:0000540!4.05e-16!33;CL:0000047!4.05e-16!33;CL:0000031!4.05e-16!33;CL:0000404!4.05e-16!33;CL:0002319!8.93e-16!43;CL:0000393!4.55e-13!39;CL:0000211!4.55e-13!39;CL:0000055!1.11e-12!50
|ontology_enrichment_celltype=CL:0000117!1.71e-16!23;CL:0000337!1.71e-16!23;CL:0000221!2.97e-16!44;CL:0000133!2.97e-16!44;CL:0000540!4.05e-16!33;CL:0000047!4.05e-16!33;CL:0000031!4.05e-16!33;CL:0000404!4.05e-16!33;CL:0002319!8.93e-16!43;CL:0000393!4.55e-13!39;CL:0000211!4.55e-13!39;CL:0000055!1.11e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000117,8.36e-32,23;CL:0000337,8.36e-32,23;CL:0000540,1.15e-21,33;CL:0000047,1.15e-21,33;CL:0000031,1.15e-21,33;CL:0000404,1.15e-21,33;CL:0000393,3.41e-17,39;CL:0000211,3.41e-17,39;CL:0000221,4.36e-17,44;CL:0000133,4.36e-17,44;CL:0002319,2.87e-16,43;CL:0002321,9.06e-09,70;CL:0002609,8.23e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.24e-33!73;UBERON:0005743!1.24e-33!73;UBERON:0000073!3.83e-33!75;UBERON:0001016!3.83e-33!75;UBERON:0001049!1.73e-26!52;UBERON:0005068!1.73e-26!52;UBERON:0006241!1.73e-26!52;UBERON:0007135!1.73e-26!52;UBERON:0000955!1.12e-24!50;UBERON:0006238!1.12e-24!50;UBERON:0002616!4.29e-24!49;UBERON:0004121!6.75e-24!102;UBERON:0000924!6.75e-24!102;UBERON:0006601!6.75e-24!102;UBERON:0000033!2.69e-23!63;UBERON:0002346!1.01e-21!71;UBERON:0003075!1.01e-21!71;UBERON:0007284!1.01e-21!71;UBERON:0002020!2.50e-21!34;UBERON:0003080!8.00e-20!40;UBERON:0002780!3.45e-19!39;UBERON:0001890!3.45e-19!39;UBERON:0006240!3.45e-19!39;UBERON:0003056!4.85e-19!49;UBERON:0002791!1.94e-17!29;UBERON:0003528!1.94e-17!29;UBERON:0001893!1.94e-17!29;UBERON:0000153!2.75e-12!94;UBERON:0000956!2.76e-12!21;UBERON:0001869!2.76e-12!21;UBERON:0000203!2.76e-12!21;UBERON:0007811!2.27e-11!86;UBERON:0002619!4.23e-10!17;UBERON:0002021!1.59e-07!10;UBERON:0000411!1.59e-07!10;UBERON:0001950!1.59e-07!10;UBERON:0003076!3.58e-07!12;UBERON:0003057!3.58e-07!12
|ontology_enrichment_uberon=UBERON:0001017!1.24e-33!73;UBERON:0005743!1.24e-33!73;UBERON:0000073!3.83e-33!75;UBERON:0001016!3.83e-33!75;UBERON:0001049!1.73e-26!52;UBERON:0005068!1.73e-26!52;UBERON:0006241!1.73e-26!52;UBERON:0007135!1.73e-26!52;UBERON:0000955!1.12e-24!50;UBERON:0006238!1.12e-24!50;UBERON:0002616!4.29e-24!49;UBERON:0004121!6.75e-24!102;UBERON:0000924!6.75e-24!102;UBERON:0006601!6.75e-24!102;UBERON:0000033!2.69e-23!63;UBERON:0002346!1.01e-21!71;UBERON:0003075!1.01e-21!71;UBERON:0007284!1.01e-21!71;UBERON:0002020!2.50e-21!34;UBERON:0003080!8.00e-20!40;UBERON:0002780!3.45e-19!39;UBERON:0001890!3.45e-19!39;UBERON:0006240!3.45e-19!39;UBERON:0003056!4.85e-19!49;UBERON:0002791!1.94e-17!29;UBERON:0003528!1.94e-17!29;UBERON:0001893!1.94e-17!29;UBERON:0000153!2.75e-12!94;UBERON:0000956!2.76e-12!21;UBERON:0001869!2.76e-12!21;UBERON:0000203!2.76e-12!21;UBERON:0007811!2.27e-11!86;UBERON:0002619!4.23e-10!17;UBERON:0002021!1.59e-07!10;UBERON:0000411!1.59e-07!10;UBERON:0001950!1.59e-07!10;UBERON:0003076!3.58e-07!12;UBERON:0003057!3.58e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.41e-41,54;UBERON:0001017,3.78e-40,73;UBERON:0002020,3.70e-39,34;UBERON:0001016,1.03e-38,75;UBERON:0001049,3.33e-38,52;UBERON:0005068,3.33e-38,52;UBERON:0006241,3.33e-38,52;UBERON:0007135,3.33e-38,52;UBERON:0003528,2.44e-31,29;UBERON:0002791,2.44e-31,29;UBERON:0001893,2.44e-31,29;UBERON:0000955,1.99e-30,47;UBERON:0006238,1.99e-30,47;UBERON:0002616,2.33e-29,46;UBERON:0004121,4.99e-29,95;UBERON:0000924,4.99e-29,95;UBERON:0006601,4.99e-29,95;UBERON:0002346,8.18e-29,64;UBERON:0003075,8.18e-29,64;UBERON:0007284,8.18e-29,64;UBERON:0010371,1.45e-26,73;UBERON:0003080,1.90e-26,40;UBERON:0002780,2.85e-25,39;UBERON:0001890,2.85e-25,39;UBERON:0006240,2.85e-25,39;UBERON:0000956,5.42e-21,21;UBERON:0001869,5.42e-21,21;UBERON:0000203,5.42e-21,21;UBERON:0003056,6.22e-20,49;UBERON:0010314,1.34e-18,92;UBERON:0002619,1.31e-16,17;UBERON:0002021,1.25e-13,10;UBERON:0000411,1.25e-13,10;UBERON:0001950,1.25e-13,10;UBERON:0003076,7.56e-12,12;UBERON:0003057,7.56e-12,12;UBERON:0002420,2.25e-11,8;UBERON:0007245,2.25e-11,8;UBERON:0010009,2.25e-11,8;UBERON:0010011,2.25e-11,8;UBERON:0000454,2.25e-11,8;UBERON:0000025,3.47e-11,114;UBERON:0004111,3.55e-11,122;UBERON:0002240,2.48e-10,6;UBERON:0005174,2.48e-10,6;UBERON:0001137,2.48e-10,6;UBERON:0001948,7.04e-09,5;UBERON:0002315,7.04e-09,5;UBERON:0011216,1.80e-08,194;UBERON:0000369,1.78e-07,5;UBERON:0002435,1.78e-07,5;UBERON:0000204,1.78e-07,5;UBERON:0010082,1.78e-07,5
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.771778308107841,0,0,7.89034197352431,3.70293685490423,6.33831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,1.76272340924412,2.02508907497536,2.73422449756797,15.7108041422092,11.4851641294839,1.71487118900936,4.2172007248024,4.5960939330501,7.70811166995721,7.40586560894089,7.21950706304344,4.61602007055678,6.49562269577109,3.64639359389732,8.37548997004143,3.93933827022176,4.27835093775068,4.71405736757868,8.96941589034349,5.21918448310842,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,1.40843419776681,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0,0,0,0.587943535678524,0,0,0,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,3.89455662452539,2.74500361691176,3.5183218591602,5.56237824615285,5.11430914660661,5.61027720310812,4.54275536589721,0.712875546952214,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0,0.540186389416048,0.150704817835715,0.476255494059295,0.512454881139399,0.937017245597288,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,0.43839146485515,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0.207125772535502,0,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,5.67782861123144,2.26390147234426,0,0,0.426576501070468,0.232236671860439,0.644337306610467,1.00841762311671,0,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0.350679099451593,0.379419222745544,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.44292937929755,0.318909537314974,0,0.172684981865896,0,0,0,0,0,3.85321415970701,6.56385444916338,0,0,0.631016438832513,0,0.215423397732799,0.477937595905104,0.222798674082394,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,2.24924921495265,0.141940085208269,0.35613120733451,0,0,0,0,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0.214337035031592,0.177340233642274,0.713475270408282,0.493647061806363,0.913394847343798,0,0,0,0,0,0.0603129249281559,0,0,0,6.86073617438886,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0.330613822901344,0,0.259229946583586,0,2.25477175473676,0.299033092087958,0.330916980914195,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0.724752362478018,0.864090018773596,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.36630324853453,0.214368379079066,0,6.21227026878773,3.22227665555024,5.72895513439397,3.95262319390481,1.37016503954128,8.3093328712867,6.75022500231806,2.70192721934532,2.26571204492102,4.65984280576638,0.518936737920883,1.19707462020309,0.853668028770671,0.972426868273176,0.209613162627982,1.10306105070008,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0.50695859978048,0.754505365544305,0.749132059759059,0.960377286073039,0.746661096422973,1.42888107384922,1.27472758539341,1.15745532278223,0.412085900803307,1.03039244094078,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.846984423737976,0.846146078916765,0.73171189149109,1.8414879800649,0.679020569229309,1.12228454331548,1.06771516311757,0.689531376628944,0.409231043169689,0.619747364743864,0.578719832943424,2.24829520144151,0.701794825336225,0.429742108096597,0,0.220591419119515,0.463735671240843
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|short_description=p3@Brsk1
|short_description=p3@Brsk1
}}
}}

Latest revision as of 17:48, 26 September 2015

Short description:p3@Brsk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Brsk1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -149bp_to_ENSMUST00000048248, NM_001003920, NM_001168572, uc009eye.1, uc009eyf.1_5end
EntrezGene:Brsk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Brsk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D55.56
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A36.56
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.41e-4154
central nervous system3.78e-4073
gray matter3.70e-3934
nervous system1.03e-3875
neural tube3.33e-3852
neural rod3.33e-3852
future spinal cord3.33e-3852
neural keel3.33e-3852
brain grey matter2.44e-3129
regional part of telencephalon2.44e-3129
telencephalon2.44e-3129
brain1.99e-3047
future brain1.99e-3047
regional part of brain2.33e-2946
ectoderm-derived structure4.99e-2995
ectoderm4.99e-2995
presumptive ectoderm4.99e-2995
neurectoderm8.18e-2964
neural plate8.18e-2964
presumptive neural plate8.18e-2964
ecto-epithelium1.45e-2673
anterior neural tube1.90e-2640
regional part of forebrain2.85e-2539
forebrain2.85e-2539
future forebrain2.85e-2539
cerebral cortex5.42e-2121
cerebral hemisphere5.42e-2121
pallium5.42e-2121
pre-chordal neural plate6.22e-2049
structure with developmental contribution from neural crest1.34e-1892
regional part of cerebral cortex1.31e-1617
occipital lobe1.25e-1310
visual cortex1.25e-1310
neocortex1.25e-1310
posterior neural tube7.56e-1212
chordal neural plate7.56e-1212
basal ganglion2.25e-118
nuclear complex of neuraxis2.25e-118
aggregate regional part of brain2.25e-118
collection of basal ganglia2.25e-118
cerebral subcortex2.25e-118
tube3.47e-11114
anatomical conduit3.55e-11122
spinal cord2.48e-106
dorsal region element2.48e-106
dorsum2.48e-106
regional part of spinal cord7.04e-095
gray matter of spinal cord7.04e-095
organ system subdivision1.80e-08194
corpus striatum1.78e-075
striatum1.78e-075
ventral part of telencephalon1.78e-075
future corpus striatum1.78e-075
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