FFCP PHASE1:Mm9::chr9:44481310..44481329,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58866 | |EntrezGene=58866 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLT2,D6RI51,Q8VCS8 | |UniProt=Q9JLT2,D6RI51,Q8VCS8 | ||
|association_with_transcript=0bp_to_ENSMUST00000034609,ENSMUST00000139389,NM_021481,uc009pec.1,uc009ped.1,uc012gry.1_5end | |association_with_transcript=0bp_to_ENSMUST00000034609,ENSMUST00000139389,NM_021481,uc009pec.1,uc009ped.1,uc012gry.1_5end | ||
|cluster_id=chr9:44481310..44481329,+ | |||
|description=CAGE_peak_1_at_Treh_5end | |description=CAGE_peak_1_at_Treh_5end | ||
|id=chr9:44481310..44481329,+ | |id=chr9:44481310..44481329,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.21e-12!9;CL:0002251!4.21e-12!9;CL:0000066!1.16e-10!25;CL:0000239!2.95e-09!6;CL:0000677!2.95e-09!6;CL:0000212!2.95e-09!6;CL:0000584!2.95e-09!6;CL:0000223!7.13e-09!20;CL:0000075!9.58e-08!7 | |ontology_enrichment_celltype=CL:0002563!4.21e-12!9;CL:0002251!4.21e-12!9;CL:0000066!1.16e-10!25;CL:0000239!2.95e-09!6;CL:0000677!2.95e-09!6;CL:0000212!2.95e-09!6;CL:0000584!2.95e-09!6;CL:0000223!7.13e-09!20;CL:0000075!9.58e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.43e-17,9;CL:0002251,4.43e-17,9;CL:0000066,1.37e-14,25;CL:0000239,6.85e-13,6;CL:0000677,6.85e-13,6;CL:0000584,6.85e-13,6;CL:0000223,1.18e-11,20;CL:0000075,6.49e-11,7;CL:0002076,1.76e-09,15;CL:0000682,4.92e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.10e-22!43;UBERON:0000344!2.09e-19!15;UBERON:0005409!1.00e-18!59;UBERON:0001242!6.26e-17!13;UBERON:0000060!6.26e-17!13;UBERON:0001262!6.26e-17!13;UBERON:0004786!6.26e-17!13;UBERON:0001007!1.11e-14!128;UBERON:0001555!1.11e-14!128;UBERON:0007026!1.11e-14!128;UBERON:0004119!3.14e-14!130;UBERON:0000925!3.14e-14!130;UBERON:0006595!3.14e-14!130;UBERON:0004921!3.67e-13!126;UBERON:0004185!3.67e-13!126;UBERON:0003350!4.21e-12!9;UBERON:0004808!4.21e-12!9;UBERON:0001277!4.21e-12!9;UBERON:0004923!8.94e-12!24;UBERON:0000485!1.88e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.54e-36,31;UBERON:0000344,7.37e-28,15;UBERON:0001242,3.35e-24,13;UBERON:0001262,3.35e-24,13;UBERON:0004786,3.35e-24,13;UBERON:0005409,2.27e-21,47;UBERON:0004923,5.31e-18,24;UBERON:0003350,4.43e-17,9;UBERON:0004808,4.43e-17,9;UBERON:0001277,4.43e-17,9;UBERON:0000485,1.28e-13,11;UBERON:0001007,9.70e-13,116;UBERON:0001555,9.70e-13,116;UBERON:0007026,9.70e-13,116;UBERON:0004119,2.23e-12,118;UBERON:0000925,2.23e-12,118;UBERON:0006595,2.23e-12,118;UBERON:0004921,5.47e-11,114;UBERON:0002108,2.31e-08,4 | |||
|phase1_expression=0,268.711063882308,226.589621215989,400.462615770243,437.281972243161,14.6054966563344,15.6520469199002,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,5.18764069921526,0,0,82.7160825841913,106.445906415167,175.714981019196,124.059454893814,94.3763999164194,72.7789696517912,59.2270804935837,5.09980174507201,0,0,0,1.44425809875637,6.81562045969819,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.61910957491345,4.54843492213368,4.48026887097336,11.5164424508037,0,0,0,0,0,0,0,0,0,0,33.7984283968418,0,0,0,0,0,0,0.117588707135705,1.0053327306374,1.23597483867187,0,0,0,0,0,3.72783522436244,0,0,188.52730674394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,619.204799311637,208.651497097536,0,0,0,0,0.444756087689741,0.190225626112559,219.232426433564,4.28217282282428,5.02670417600539,8.35617182572834,9.35827618171777,218.413116302976,221.325363071687,341.52728363124,0,0,0,0,0.775809948670503,0.98190147846446,0.252946148497029,5.31396532726568,25.2767951824613,24.5560356204383,0,0,0.196558995113203,0,0,0,0,0,1.94562272130042,0.823684239564244,1.43768206527355,0,0,0.252578877947112,0.717589654087649,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,146.323379988185,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0.518459893167171,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,268.711063882308,226.589621215989,400.462615770243,437.281972243161,14.6054966563344,15.6520469199002,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,5.18764069921526,0,0,82.7160825841913,106.445906415167,175.714981019196,124.059454893814,94.3763999164194,72.7789696517912,59.2270804935837,5.09980174507201,0,0,0,1.44425809875637,6.81562045969819,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,1.61910957491345,4.54843492213368,4.48026887097336,11.5164424508037,0,0,0,0,0,0,0,0,0,0,33.7984283968418,0,0,0,0,0,0,0.117588707135705,1.0053327306374,1.23597483867187,0,0,0,0,0,3.72783522436244,0,0,188.52730674394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,619.204799311637,208.651497097536,0,0,0,0,0.444756087689741,0.190225626112559,219.232426433564,4.28217282282428,5.02670417600539,8.35617182572834,9.35827618171777,218.413116302976,221.325363071687,341.52728363124,0,0,0,0,0.775809948670503,0.98190147846446,0.252946148497029,5.31396532726568,25.2767951824613,24.5560356204383,0,0,0.196558995113203,0,0,0,0,0,1.94562272130042,0.823684239564244,1.43768206527355,0,0,0.252578877947112,0.717589654087649,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,1.98475558249466,0,0,0,0,0,146.323379988185,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0.518459893167171,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.237270036248348,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p1@Treh | |short_description=p1@Treh | ||
}} | }} |
Latest revision as of 17:12, 26 September 2015
Short description: | p1@Treh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Treh_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000034609, ENSMUST00000139389, NM_021481, uc009pec.1, uc009ped.1, uc012gry.1_5end |
EntrezGene: | Treh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.43e-17 | 9 |
epithelial cell of alimentary canal | 4.43e-17 | 9 |
epithelial cell | 1.37e-14 | 25 |
brush border epithelial cell | 6.85e-13 | 6 |
gut absorptive cell | 6.85e-13 | 6 |
enterocyte | 6.85e-13 | 6 |
endodermal cell | 1.18e-11 | 20 |
columnar/cuboidal epithelial cell | 6.49e-11 | 7 |
endo-epithelial cell | 1.76e-09 | 15 |
M cell of gut | 4.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.54e-36 | 31 |
mucosa | 7.37e-28 | 15 |
intestinal mucosa | 3.35e-24 | 13 |
wall of intestine | 3.35e-24 | 13 |
gastrointestinal system mucosa | 3.35e-24 | 13 |
gastrointestinal system | 2.27e-21 | 47 |
organ component layer | 5.31e-18 | 24 |
epithelium of mucosa | 4.43e-17 | 9 |
gastrointestinal system epithelium | 4.43e-17 | 9 |
intestinal epithelium | 4.43e-17 | 9 |
simple columnar epithelium | 1.28e-13 | 11 |
digestive system | 9.70e-13 | 116 |
digestive tract | 9.70e-13 | 116 |
primitive gut | 9.70e-13 | 116 |
endoderm-derived structure | 2.23e-12 | 118 |
endoderm | 2.23e-12 | 118 |
presumptive endoderm | 2.23e-12 | 118 |
subdivision of digestive tract | 5.47e-11 | 114 |
small intestine | 2.31e-08 | 4 |