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FFCP PHASE1:Mm9::chr12:58646974..58647003,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:58646974..58647003,-
|DHSsupport=NA
|short_description=p1@Foxa1
|DPIdataset=NA
|description=CAGE_peak_1_at_Foxa1_5end
|association_with_transcript=104bp_to_ENSMUST00000044380,NM_008259,uc007nps.1_5end
|EntrezGene=15375
|EntrezGene=15375
|HGNC=
|HGNC=
|MCL_coexpression_id=2786
|TSSclassifier=NA
|UniProt=P35582
|UniProt=P35582
|association_with_transcript=104bp_to_ENSMUST00000044380,NM_008259,uc007nps.1_5end
|cluster_id=chr12:58646974..58647003,-
|description=CAGE_peak_1_at_Foxa1_5end
|id=chr12:58646974..58647003,-
|ontology_enrichment_celltype=CL:0000223!4.84e-07!20;CL:0000066!5.23e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-09,25;CL:0000223,9.52e-09,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.00e-25!128;UBERON:0001555!3.00e-25!128;UBERON:0007026!3.00e-25!128;UBERON:0004119!1.71e-24!130;UBERON:0000925!1.71e-24!130;UBERON:0006595!1.71e-24!130;UBERON:0004921!3.09e-24!126;UBERON:0004185!3.09e-24!126;UBERON:0005911!3.59e-11!69;UBERON:0000077!4.46e-11!97;UBERON:0005409!9.88e-11!59;UBERON:0005178!1.40e-10!17;UBERON:0005181!1.40e-10!17;UBERON:0002224!1.40e-10!17;UBERON:0000915!1.40e-10!17;UBERON:0008947!1.40e-10!17;UBERON:0003258!1.40e-10!17;UBERON:0001041!1.88e-10!92;UBERON:0009854!5.07e-10!23;UBERON:0009856!5.07e-10!23;UBERON:0009569!8.69e-10!66;UBERON:0002107!2.29e-09!22;UBERON:0007499!2.29e-09!22;UBERON:0006925!2.29e-09!22;UBERON:0009497!2.29e-09!22;UBERON:0000015!2.29e-09!22;UBERON:0002423!2.29e-09!22;UBERON:0006235!2.29e-09!22;UBERON:0008835!2.29e-09!22;UBERON:0003894!2.29e-09!22;UBERON:0004161!2.29e-09!22;UBERON:0008836!2.29e-09!22;UBERON:0002365!5.56e-09!25;UBERON:0002330!5.56e-09!25;UBERON:0000160!1.49e-08!43;UBERON:0002048!1.87e-08!14;UBERON:0000117!1.87e-08!14;UBERON:0000171!1.87e-08!14;UBERON:0000170!1.87e-08!14;UBERON:0005597!1.87e-08!14;UBERON:0000118!1.87e-08!14;UBERON:0005153!6.16e-08!17;UBERON:0005177!1.85e-07!85;UBERON:0000344!4.07e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.14e-30,116;UBERON:0001555,5.14e-30,116;UBERON:0007026,5.14e-30,116;UBERON:0004119,6.85e-29,118;UBERON:0000925,6.85e-29,118;UBERON:0006595,6.85e-29,118;UBERON:0004921,8.03e-29,114;UBERON:0005409,8.18e-17,47;UBERON:0000160,3.81e-14,31;UBERON:0001041,2.35e-12,80;UBERON:0005178,2.88e-12,17;UBERON:0005181,2.88e-12,17;UBERON:0002224,2.88e-12,17;UBERON:0000915,2.88e-12,17;UBERON:0008947,2.88e-12,17;UBERON:0003258,2.88e-12,17;UBERON:0009854,1.33e-11,23;UBERON:0009856,1.33e-11,23;UBERON:0002107,7.94e-11,22;UBERON:0007499,7.94e-11,22;UBERON:0006925,7.94e-11,22;UBERON:0009497,7.94e-11,22;UBERON:0000015,7.94e-11,22;UBERON:0002423,7.94e-11,22;UBERON:0006235,7.94e-11,22;UBERON:0008835,7.94e-11,22;UBERON:0003894,7.94e-11,22;UBERON:0004161,7.94e-11,22;UBERON:0008836,7.94e-11,22;UBERON:0002365,1.33e-10,25;UBERON:0002330,1.33e-10,25;UBERON:0005911,1.41e-10,69;UBERON:0009569,2.68e-10,66;UBERON:0002048,9.57e-10,14;UBERON:0000117,9.57e-10,14;UBERON:0000171,9.57e-10,14;UBERON:0000170,9.57e-10,14;UBERON:0005597,9.57e-10,14;UBERON:0000118,9.57e-10,14;UBERON:0005153,2.17e-09,17;UBERON:0011216,3.03e-08,194;UBERON:0000344,3.68e-08,15;UBERON:0001242,2.80e-07,13;UBERON:0001262,2.80e-07,13;UBERON:0004786,2.80e-07,13;UBERON:0005177,2.94e-07,79;UBERON:0005157,5.04e-07,20
|phase1_expression=0,6.97950815278722,12.739978702907,3.62957053568196,8.01433167914156,35.7582849172325,35.2755087299244,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.99703463710028,0,0,8.63959083084396,9.40578052375397,17.8011908875656,21.9688618041128,19.6078821744159,11.5914285868388,8.31699428207772,24.1686256614282,0,0,0,9.24325183204079,9.30914014007557,11.637653306955,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.839918529752175,5.75010257459886,0,0,0,0,0,0,4.24864567805155,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.766124028511126,2.15049146558741,6.06676923558892,3.84248103130121,7.29278718779464,0.279182999001381,2.8138130501584,3.36156145108982,0.883885756421003,0.711858403995515,0.559198337475902,0,0,17.6817338108023,21.5105969245347,32.638624017972,30.7630819233556,24.0417274455638,29.1217476613268,8.28622078777336,0,0,0.35333957451034,0,0,0,0,47.4115379814559,54.4723710771462,59.1463600667296,8.5637909789295,0,0,0.693941307064543,1.52232739156071,0.691846491768175,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,41.0061874679869,0,0,5.8755122697976,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0.452114453507145,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,1.17263029990548,0,2.13070262026689,0,0.308534225774757,0.232533944750408,1.07309360559848,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0,3.63460661282178,6.08236303326152,9.38468302355029,15.3276203427889,10.5671318284117,9.4791256572971,7.78323153457046,6.08722003560189,4.2707615539006,4.11747386810027,6.53471542880701,5.76973768919337,6.62877896205008,3.59527763461689,9.72621224436124,9.16049856970089,2.27601481143698,2.28497025219458,0,1.4255592949172,1.16371492300575,1.19230893813542,0.252946148497029,0.590440591918409,0.470996183524124,0.370191491765402,18.0836102523161,5.17219827719892,4.71741588271687,3.14806957338795,5.07150303471257,6.75296047306767,6.11102044275408,6.61701116136864,4.05338066937588,4.94210543738547,21.5652309791032,7.07067800570156,6.86482880852033,11.1134706296729,14.1723956682311,6.27176577772377,26.7892125741577,12.506433176852,17.9261474086228,14.9375675482166,23.2343345805617,21.9433197248779,28.8032805472077,22.4403695036469,14.6600684018758,11.0732344824387,15.4671125597762,15.2392882685636,12.9513736399422,12.0058718622655,0,0,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.354680467284547,0.713475270408282,0.164549020602121,0.304464949114599,0.23467170806371,0,114.895295386635,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,7.57850175237612,0,0,0.206386867963223,0,0,0,0,1.18984900995699,1.6794174278839,1.10559979043539,70.6456257331184,26.4140554640248,30.2946006019005,28.5134099769555,33.0359507702861,33.8461973806575,35.0647300600534,44.2195988130547,46.3308017311732,13.73918716893,28.5816084019986,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.821687657318618,0.649604114888975,0.895133478337407,0.39736270956253,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.877120926657772,0.0962118416403295,0,15.6443964694496,0,0,0,70.7073914157817,0,0,1.71494703263253,39.6241962187937,0,0,0,0,0,0,0,0,0,0,1.45302286617847,3.99024873401031,1.70733605754134,2.18796045361465,2.93458427679175,4.59608771125035,4.22268782823069,4.73880631649457,3.20919209591815,5.55933865880354,3.54871019846336,2.26351609663291,5.05664140337365,5.31408764960415,4.82457939227151,4.28664322154766,4.1718357340148,3.8581844092741,2.88460130562315,5.2991611248383,3.77156177623957,1.77475806159337,4.29185141905178,3.63366041580821,4.89368778159719,4.65380343404221,4.024415403201,4.47218509444333,3.80251518768413,8.97827634652382,4.50813068871862,3.25064791839359,5.72923460437565,3.40861050609125,4.43685205256625,5.49583271463481,2.33931608445408,4.94203424311086,0,1.32354851471709,0
|phase1_expression=0,6.97950815278722,12.739978702907,3.62957053568196,8.01433167914156,35.7582849172325,35.2755087299244,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.99703463710028,0,0,8.63959083084396,9.40578052375397,17.8011908875656,21.9688618041128,19.6078821744159,11.5914285868388,8.31699428207772,24.1686256614282,0,0,0,9.24325183204079,9.30914014007557,11.637653306955,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.839918529752175,5.75010257459886,0,0,0,0,0,0,4.24864567805155,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.766124028511126,2.15049146558741,6.06676923558892,3.84248103130121,7.29278718779464,0.279182999001381,2.8138130501584,3.36156145108982,0.883885756421003,0.711858403995515,0.559198337475902,0,0,17.6817338108023,21.5105969245347,32.638624017972,30.7630819233556,24.0417274455638,29.1217476613268,8.28622078777336,0,0,0.35333957451034,0,0,0,0,47.4115379814559,54.4723710771462,59.1463600667296,8.5637909789295,0,0,0.693941307064543,1.52232739156071,0.691846491768175,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,41.0061874679869,0,0,5.8755122697976,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0.452114453507145,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,1.17263029990548,0,2.13070262026689,0,0.308534225774757,0.232533944750408,1.07309360559848,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0,3.63460661282178,6.08236303326152,9.38468302355029,15.3276203427889,10.5671318284117,9.4791256572971,7.78323153457046,6.08722003560189,4.2707615539006,4.11747386810027,6.53471542880701,5.76973768919337,6.62877896205008,3.59527763461689,9.72621224436124,9.16049856970089,2.27601481143698,2.28497025219458,0,1.4255592949172,1.16371492300575,1.19230893813542,0.252946148497029,0.590440591918409,0.470996183524124,0.370191491765402,18.0836102523161,5.17219827719892,4.71741588271687,3.14806957338795,5.07150303471257,6.75296047306767,6.11102044275408,6.61701116136864,4.05338066937588,4.94210543738547,21.5652309791032,7.07067800570156,6.86482880852033,11.1134706296729,14.1723956682311,6.27176577772377,26.7892125741577,12.506433176852,17.9261474086228,14.9375675482166,23.2343345805617,21.9433197248779,28.8032805472077,22.4403695036469,14.6600684018758,11.0732344824387,15.4671125597762,15.2392882685636,12.9513736399422,12.0058718622655,0,0,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.354680467284547,0.713475270408282,0.164549020602121,0.304464949114599,0.23467170806371,0,114.895295386635,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,7.57850175237612,0,0,0.206386867963223,0,0,0,0,1.18984900995699,1.6794174278839,1.10559979043539,70.6456257331184,26.4140554640248,30.2946006019005,28.5134099769555,33.0359507702861,33.8461973806575,35.0647300600534,44.2195988130547,46.3308017311732,13.73918716893,28.5816084019986,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.821687657318618,0.649604114888975,0.895133478337407,0.39736270956253,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.877120926657772,0.0962118416403295,0,15.6443964694496,0,0,0,70.7073914157817,0,0,1.71494703263253,39.6241962187937,0,0,0,0,0,0,0,0,0,0,1.45302286617847,3.99024873401031,1.70733605754134,2.18796045361465,2.93458427679175,4.59608771125035,4.22268782823069,4.73880631649457,3.20919209591815,5.55933865880354,3.54871019846336,2.26351609663291,5.05664140337365,5.31408764960415,4.82457939227151,4.28664322154766,4.1718357340148,3.8581844092741,2.88460130562315,5.2991611248383,3.77156177623957,1.77475806159337,4.29185141905178,3.63366041580821,4.89368778159719,4.65380343404221,4.024415403201,4.47218509444333,3.80251518768413,8.97827634652382,4.50813068871862,3.25064791839359,5.72923460437565,3.40861050609125,4.43685205256625,5.49583271463481,2.33931608445408,4.94203424311086,0,1.32354851471709,0
|short_description=p1@Foxa1
}}
}}

Latest revision as of 16:52, 26 September 2015

Short description:p1@Foxa1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Foxa1_5end
Coexpression cluster:MCL_coexpression_mm9:2786
Association with transcript: 104bp_to_ENSMUST00000044380, NM_008259, uc007nps.1_5end
EntrezGene:Foxa1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Foxa1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I735.76
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I835.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H917.80
GP2+ M cell, pool2.CNhs13231.11846-124I121.97
GP2+ M cell, pool3.CNhs13240.11847-124I219.61
Ileum epithelium, pool1.CNhs13199.10252-104B911.59
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C830.76
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G147.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G254.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G359.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.56
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D515.33
intestine, embryo E15.CNhs10602.976-16D810.57
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E39.73
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B218.08
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G46.62
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H114.17
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B126.79
lung, embryo E12.CNhs10522.354-16G212.51
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C514.94
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A621.94
lung, embryo E18.CNhs10583.1287-20I628.80
lung, neonate N00.CNhs11224.640-42C622.44
lung, neonate N06.CNhs11212.683-20E514.66
lung, neonate N07.CNhs11111.715-19A311.07
lung, neonate N10.CNhs11219.750-23E615.47
lung, neonate N20.CNhs11109.822-18A415.24
lung, neonate N25.CNhs11119.1359-25C712.95
lung, neonate N30.CNhs11133.1394-42H212.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F8114.90
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H670.65
stomach, embryo E12.CNhs10588.356-43E326.41
stomach, embryo E15.CNhs10603.1252-16G830.29
stomach, embryo E16.CNhs11022.459-17D428.51
stomach, embryo E17.CNhs11006.1035-18D533.04
stomach, embryo E18.CNhs10999.1286-20C633.85
stomach, neonate N03.CNhs11193.1340-24B835.06
stomach, neonate N07.CNhs11210.718-18A944.22
stomach, neonate N25.CNhs11104.1355-25E446.33
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C128.58
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B415.64
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E470.71
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F839.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.68e-0925
endodermal cell9.52e-0920

Uber anatomy
Ontology termp-valuen
digestive system5.14e-30116
digestive tract5.14e-30116
primitive gut5.14e-30116
endoderm-derived structure6.85e-29118
endoderm6.85e-29118
presumptive endoderm6.85e-29118
subdivision of digestive tract8.03e-29114
gastrointestinal system8.18e-1747
intestine3.81e-1431
foregut2.35e-1280
thoracic cavity element2.88e-1217
thoracic segment organ2.88e-1217
thoracic cavity2.88e-1217
thoracic segment of trunk2.88e-1217
respiratory primordium2.88e-1217
endoderm of foregut2.88e-1217
digestive tract diverticulum1.33e-1123
sac1.33e-1123
liver7.94e-1122
epithelial sac7.94e-1122
digestive gland7.94e-1122
epithelium of foregut-midgut junction7.94e-1122
anatomical boundary7.94e-1122
hepatobiliary system7.94e-1122
foregut-midgut junction7.94e-1122
hepatic diverticulum7.94e-1122
liver primordium7.94e-1122
septum transversum7.94e-1122
liver bud7.94e-1122
exocrine gland1.33e-1025
exocrine system1.33e-1025
endo-epithelium1.41e-1069
subdivision of trunk2.68e-1066
lung9.57e-1014
respiratory tube9.57e-1014
respiration organ9.57e-1014
pair of lungs9.57e-1014
lung primordium9.57e-1014
lung bud9.57e-1014
epithelial bud2.17e-0917
organ system subdivision3.03e-08194
mucosa3.68e-0815
intestinal mucosa2.80e-0713
wall of intestine2.80e-0713
gastrointestinal system mucosa2.80e-0713
trunk region element2.94e-0779
epithelial fold5.04e-0720
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