FFCP PHASE1:Mm9::chr17:56145095..56145135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68047 | |EntrezGene=68047 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=B8JJA2 | |UniProt=B8JJA2 | ||
|association_with_transcript=0bp_to_ENSMUST00000133998_5end | |association_with_transcript=0bp_to_ENSMUST00000133998_5end | ||
|cluster_id=chr17:56145095..56145135,+ | |||
|description=CAGE_peak_3_at_Mpnd_5end | |description=CAGE_peak_3_at_Mpnd_5end | ||
|id=chr17:56145095..56145135,+ | |id=chr17:56145095..56145135,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.57e-14,6;CL:0000677,8.57e-14,6;CL:0000584,8.57e-14,6;CL:0000075,1.08e-11,7;CL:0000066,3.83e-10,25;CL:0002563,6.89e-09,9;CL:0002251,6.89e-09,9;CL:0002076,4.37e-08,15;CL:0000682,9.85e-08,3;CL:0000223,4.03e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.04e-14!130;UBERON:0000925!7.04e-14!130;UBERON:0006595!7.04e-14!130;UBERON:0001007!1.93e-13!128;UBERON:0001555!1.93e-13!128;UBERON:0007026!1.93e-13!128;UBERON:0004921!2.16e-12!126;UBERON:0004185!2.16e-12!126;UBERON:0005409!2.17e-12!59;UBERON:0000160!1.21e-10!43;UBERON:0000344!1.20e-07!15 | |ontology_enrichment_uberon=UBERON:0004119!7.04e-14!130;UBERON:0000925!7.04e-14!130;UBERON:0006595!7.04e-14!130;UBERON:0001007!1.93e-13!128;UBERON:0001555!1.93e-13!128;UBERON:0007026!1.93e-13!128;UBERON:0004921!2.16e-12!126;UBERON:0004185!2.16e-12!126;UBERON:0005409!2.17e-12!59;UBERON:0000160!1.21e-10!43;UBERON:0000344!1.20e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.65e-32,31;UBERON:0005409,2.71e-27,47;UBERON:0000344,7.19e-20,15;UBERON:0001242,3.19e-16,13;UBERON:0001262,3.19e-16,13;UBERON:0004786,3.19e-16,13;UBERON:0001007,1.62e-15,116;UBERON:0001555,1.62e-15,116;UBERON:0007026,1.62e-15,116;UBERON:0004119,4.13e-15,118;UBERON:0000925,4.13e-15,118;UBERON:0006595,4.13e-15,118;UBERON:0004921,1.62e-13,114;UBERON:0004923,2.72e-11,24;UBERON:0002108,1.87e-09,4;UBERON:0003350,6.89e-09,9;UBERON:0004808,6.89e-09,9;UBERON:0001277,6.89e-09,9;UBERON:0000331,1.70e-07,3;UBERON:0002116,1.70e-07,3;UBERON:0001204,1.70e-07,3;UBERON:0001168,1.70e-07,3;UBERON:0000485,4.17e-07,11 | |||
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|phase1_expression=0,19.1936474201649,15.9249733786338,30.5488853419898,27.0483694171027,2.68606835059024,4.43864017131499,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.17008658030214,0,0,4.31979541542198,6.42345986988076,12.0588712464154,9.47676391549965,8.18790684206378,12.3515222646643,8.56902441183765,3.32595765982957,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,1.44932244350839,0.860423876981386,0,0,0.649776417447669,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0.432982082022428,1.26679932737549,1.01104889002957,2.16949371466214,0.258937883647172,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0.494389935468748,0,0,0.161766849947409,0,0,0,0,0.41889341362691,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,1.0108910337347,0.210441855886474,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0.590292695242212,0.462801338662135,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,10.5734010554815,6.87571473325215,0,0.232236671860439,0,1.4117846723634,2.44615848229357,1.52180500890047,5.21981967698963,1.81168850196412,2.26201687920243,0.795825888164603,1.9496408711912,6.29173586057955,6.26800344636613,5.57595565112228,0,0.571242563048644,0,0.203651327845314,0.193952487167626,0.280543279561274,0.569128834118316,0.442830443938806,0.784993639206874,0.370191491765402,0.296452627087149,0.333690211432188,0,0,0,0.241177159752417,0.763877555344259,0.575392274901621,0.486405680325106,0.274561413188081,1.43768206527355,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0.37898282354097,0,0.509235257325564,0,0.670025029767263,0.952174563544055,0.585400943573396,0.630540576424764,1.10732344824387,0.797273843287435,2.13022309130459,0.518054945597687,1.3018415272336,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0.604647113929502,0.754420319023592,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0.23467170806371,0.42366414172764,0.661585194164886,0.16488625294148,0,0.120625849856312,0.238744688006273,0.164140899745061,6.70405924248657,0.18542530201051,0.341741761595705,0,0.555583582109135,0,0.27338845544205,0,0,0,0,0.954670618015114,0,0.609958401380546,1.18805874903981,0.836353184057875,1.74690050996942,0.404593039154462,0.165306911450672,1.30877970992015,1.8146096260851,0,0,0.448549638131936,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.288635524920988,0.233753804363138,0.226730383615211,0.887943813496259,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0,0.857473516316263,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.412070114477788,1.28367683836726,0.252697211763798,1.01391719956096,0,0.468207537349412,0.192075457214608,0.516919220600519,0,0.579421629724277,0.192909220463705,0.412085900803307,0.441596760403192,0,0.70990322463735,0.238436189947321,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0,0.679020569229309,1.12228454331548,0.474540072496697,0.197008964751127,0.818462086339379,0.464810523557898,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p3@Mpnd | |short_description=p3@Mpnd | ||
}} | }} |
Latest revision as of 16:45, 26 September 2015
Short description: | p3@Mpnd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mpnd_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000133998_5end |
EntrezGene: | Mpnd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.57e-14 | 6 |
gut absorptive cell | 8.57e-14 | 6 |
enterocyte | 8.57e-14 | 6 |
columnar/cuboidal epithelial cell | 1.08e-11 | 7 |
epithelial cell | 3.83e-10 | 25 |
intestinal epithelial cell | 6.89e-09 | 9 |
epithelial cell of alimentary canal | 6.89e-09 | 9 |
endo-epithelial cell | 4.37e-08 | 15 |
M cell of gut | 9.85e-08 | 3 |
endodermal cell | 4.03e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.65e-32 | 31 |
gastrointestinal system | 2.71e-27 | 47 |
mucosa | 7.19e-20 | 15 |
intestinal mucosa | 3.19e-16 | 13 |
wall of intestine | 3.19e-16 | 13 |
gastrointestinal system mucosa | 3.19e-16 | 13 |
digestive system | 1.62e-15 | 116 |
digestive tract | 1.62e-15 | 116 |
primitive gut | 1.62e-15 | 116 |
endoderm-derived structure | 4.13e-15 | 118 |
endoderm | 4.13e-15 | 118 |
presumptive endoderm | 4.13e-15 | 118 |
subdivision of digestive tract | 1.62e-13 | 114 |
organ component layer | 2.72e-11 | 24 |
small intestine | 1.87e-09 | 4 |
epithelium of mucosa | 6.89e-09 | 9 |
gastrointestinal system epithelium | 6.89e-09 | 9 |
intestinal epithelium | 6.89e-09 | 9 |
ileal mucosa | 1.70e-07 | 3 |
ileum | 1.70e-07 | 3 |
mucosa of small intestine | 1.70e-07 | 3 |
wall of small intestine | 1.70e-07 | 3 |
simple columnar epithelium | 4.17e-07 | 11 |