FFCP PHASE1:Mm9::chr12:57714288..57714305,-: Difference between revisions
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|id=chr12:57714288..57714305,-
|short_description=p2@Nkx2-9
|description=CAGE_peak_2_at_Nkx2-9_5end
|association_with_transcript=-17bp_to_ENSMUST00000072631,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18094 | |EntrezGene=18094 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=97 | |||
|TSSclassifier=NA | |||
|UniProt=B2RWY9 | |UniProt=B2RWY9 | ||
|association_with_transcript=-17bp_to_ENSMUST00000072631,ENSMUST00000171331,NM_008701,uc007nph.1_5end | |||
|cluster_id=chr12:57714288..57714305,- | |||
|description=CAGE_peak_2_at_Nkx2-9_5end | |||
|id=chr12:57714288..57714305,- | |||
|ontology_enrichment_celltype=CL:0000349!1.50e-09!3;CL:0000351!1.50e-09!3;CL:0000068!4.54e-09!3;CL:0002202!4.54e-09!3;CL:0000069!4.54e-09!3;CL:0002632!4.54e-09!3;CL:0002368!4.54e-09!3;CL:0000307!4.54e-09!3;CL:0000377!4.54e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-38,3;CL:0000351,1.17e-38,3;CL:0000068,2.33e-17,3;CL:0002202,2.33e-17,3;CL:0000069,2.33e-17,3;CL:0002632,2.33e-17,3;CL:0002368,2.33e-17,3;CL:0000307,2.33e-17,3;CL:0000377,2.33e-17,3;CL:0000708,1.76e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.92e-11!6;UBERON:0000358!1.50e-09!3;UBERON:0000307!1.50e-09!3;UBERON:0003126!4.54e-09!3;UBERON:0001005!4.54e-09!3;UBERON:0007196!4.54e-09!3;UBERON:0001558!4.54e-09!3;UBERON:0000073!6.79e-09!75;UBERON:0001016!6.79e-09!75;UBERON:0001017!3.13e-08!73;UBERON:0005743!3.13e-08!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.17e-38,3;UBERON:0000307,1.17e-38,3;UBERON:0007010,1.17e-38,3;UBERON:0003126,2.33e-17,3;UBERON:0001005,2.33e-17,3;UBERON:0007196,2.33e-17,3;UBERON:0001558,2.33e-17,3;UBERON:0003210,1.76e-07,2;UBERON:0001896,2.03e-07,2;UBERON:0002298,2.03e-07,2;UBERON:0005290,2.03e-07,2;UBERON:0010096,2.03e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0,0.61119299110724,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,1.26679932737549,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77163478772568,6.6388253891012,5.87596157274275,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,0,0,0,1.35537812827653,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0.383062014255563,0.153606533256243,0,0,0,0.279182999001381,0,0.61119299110724,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,1.26679932737549,0.505524445014783,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.449371918214468,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.28932855251423,0,0,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77163478772568,6.6388253891012,5.87596157274275,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Nkx2-9 | |||
}} | }} |
Latest revision as of 16:45, 26 September 2015
Short description: | p2@Nkx2-9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nkx2-9_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | -17bp_to_ENSMUST00000072631, ENSMUST00000171331, NM_008701, uc007nph.1_5end |
EntrezGene: | Nkx2-9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.17e-38 | 3 |
trophoblast cell | 1.17e-38 | 3 |
duct epithelial cell | 2.33e-17 | 3 |
epithelial cell of tracheobronchial tree | 2.33e-17 | 3 |
branched duct epithelial cell | 2.33e-17 | 3 |
epithelial cell of lower respiratory tract | 2.33e-17 | 3 |
respiratory epithelial cell | 2.33e-17 | 3 |
tracheal epithelial cell | 2.33e-17 | 3 |
tracheoblast | 2.33e-17 | 3 |
leptomeningeal cell | 1.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.17e-38 | 3 |
blastula | 1.17e-38 | 3 |
cleaving embryo | 1.17e-38 | 3 |
trachea | 2.33e-17 | 3 |
respiratory airway | 2.33e-17 | 3 |
tracheobronchial tree | 2.33e-17 | 3 |
lower respiratory tract | 2.33e-17 | 3 |
blood-cerebrospinal fluid barrier | 1.76e-07 | 2 |
medulla oblongata | 2.03e-07 | 2 |
brainstem | 2.03e-07 | 2 |
myelencephalon | 2.03e-07 | 2 |
future myelencephalon | 2.03e-07 | 2 |