FFCP PHASE1:Mm9::chr6:125017706..125017717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381810 | |EntrezGene=381810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |MCL_coexpression_id=12 | ||
|TSSclassifier=NA | |||
|UniProt=G3X9K0,F6S365,Q149R9 | |UniProt=G3X9K0,F6S365,Q149R9 | ||
|association_with_transcript=-220bp_to_ENSMUST00000088292,ENSMUST00000140346,NM_001163269,uc009dtj.1_5end | |association_with_transcript=-220bp_to_ENSMUST00000088292,ENSMUST00000140346,NM_001163269,uc009dtj.1_5end | ||
|cluster_id=chr6:125017706..125017717,+ | |||
|description=CAGE_peak_5_at_Lpar5_5end | |description=CAGE_peak_5_at_Lpar5_5end | ||
|id=chr6:125017706..125017717,+ | |id=chr6:125017706..125017717,+ | ||
|ontology_enrichment_celltype=CL:0002563!8.47e-11!9;CL:0002251!8.47e-11!9;CL:0000239!1.35e-08!6;CL:0000677!1.35e-08!6;CL:0000212!1.35e-08!6;CL:0000584!1.35e-08!6;CL:0000791!2.64e-07!9;CL:0000789!2.64e-07!9;CL:0002420!2.64e-07!9;CL:0002419!2.64e-07!9;CL:0000790!2.64e-07!9;CL:0000075!3.62e-07!7;CL:0000084!7.53e-07!11;CL:0000827!7.53e-07!11 | |ontology_enrichment_celltype=CL:0002563!8.47e-11!9;CL:0002251!8.47e-11!9;CL:0000239!1.35e-08!6;CL:0000677!1.35e-08!6;CL:0000212!1.35e-08!6;CL:0000584!1.35e-08!6;CL:0000791!2.64e-07!9;CL:0000789!2.64e-07!9;CL:0002420!2.64e-07!9;CL:0002419!2.64e-07!9;CL:0000790!2.64e-07!9;CL:0000075!3.62e-07!7;CL:0000084!7.53e-07!11;CL:0000827!7.53e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.70e-18,6;CL:0000677,5.70e-18,6;CL:0000584,5.70e-18,6;CL:0000075,2.19e-15,7;CL:0000682,1.77e-13,3;CL:0002563,6.24e-12,9;CL:0002251,6.24e-12,9;CL:0000066,5.02e-10,25;CL:0002076,4.49e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.54e-19!59;UBERON:0000344!8.15e-18!15;UBERON:0000160!9.61e-17!43;UBERON:0001242!1.60e-15!13;UBERON:0000060!1.60e-15!13;UBERON:0001262!1.60e-15!13;UBERON:0004786!1.60e-15!13;UBERON:0004119!9.72e-15!130;UBERON:0000925!9.72e-15!130;UBERON:0006595!9.72e-15!130;UBERON:0001007!1.48e-13!128;UBERON:0001555!1.48e-13!128;UBERON:0007026!1.48e-13!128;UBERON:0004923!2.02e-13!24;UBERON:0004921!3.71e-12!126;UBERON:0004185!3.71e-12!126;UBERON:0003350!8.47e-11!9;UBERON:0004808!8.47e-11!9;UBERON:0001277!8.47e-11!9;UBERON:0000485!2.22e-08!11 | |ontology_enrichment_uberon=UBERON:0005409!1.54e-19!59;UBERON:0000344!8.15e-18!15;UBERON:0000160!9.61e-17!43;UBERON:0001242!1.60e-15!13;UBERON:0000060!1.60e-15!13;UBERON:0001262!1.60e-15!13;UBERON:0004786!1.60e-15!13;UBERON:0004119!9.72e-15!130;UBERON:0000925!9.72e-15!130;UBERON:0006595!9.72e-15!130;UBERON:0001007!1.48e-13!128;UBERON:0001555!1.48e-13!128;UBERON:0007026!1.48e-13!128;UBERON:0004923!2.02e-13!24;UBERON:0004921!3.71e-12!126;UBERON:0004185!3.71e-12!126;UBERON:0003350!8.47e-11!9;UBERON:0004808!8.47e-11!9;UBERON:0001277!8.47e-11!9;UBERON:0000485!2.22e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.83e-29,31;UBERON:0000344,1.84e-27,15;UBERON:0001242,9.28e-21,13;UBERON:0001262,9.28e-21,13;UBERON:0004786,9.28e-21,13;UBERON:0005409,3.84e-18,47;UBERON:0004923,1.35e-16,24;UBERON:0003350,6.24e-12,9;UBERON:0004808,6.24e-12,9;UBERON:0001277,6.24e-12,9;UBERON:0002108,1.38e-10,4;UBERON:0000485,9.99e-10,11;UBERON:0001962,4.32e-09,2;UBERON:0001961,4.32e-09,2;UBERON:0001744,4.32e-09,2;UBERON:0001007,7.18e-08,116;UBERON:0001555,7.18e-08,116;UBERON:0007026,7.18e-08,116;UBERON:0004119,1.10e-07,118;UBERON:0000925,1.10e-07,118;UBERON:0006595,1.10e-07,118;UBERON:0000331,6.37e-07,3;UBERON:0002116,6.37e-07,3;UBERON:0001204,6.37e-07,3;UBERON:0001168,6.37e-07,3 | |||
|phase1_expression=0,1.04692622291808,4.09499315450582,4.83942738090928,4.50806156951712,1.34303417529512,0.934450562382103,0.774739940649458,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.786783621770977,0,0,0,0,0,0,0,0.0992909512008853,0,1.43993180514066,1.37645568640302,2.29692785646008,1.7230479846363,1.50829862880122,3.42042155021473,3.52842181663903,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,0.596869416123452,0.58489226135736,2.69645822596266,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0,1.7488850197791,0,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,4.09499315450582,4.83942738090928,4.50806156951712,1.34303417529512,0.934450562382103,0.774739940649458,0.140788722151667,0,0.171217968225505,0.239316476986009,0.342401459862411,0.786783621770977,0,0,0,0,0,0,0,0.0992909512008853,0,1.43993180514066,1.37645568640302,2.29692785646008,1.7230479846363,1.50829862880122,3.42042155021473,3.52842181663903,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0,0.570676878337677,1.42358718463353,0.658795818896044,0.502670417600539,0.596869416123452,0.58489226135736,2.69645822596266,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0.65954501176592,0.161464426695906,0.301564624640779,0.119372344003136,0,1.7488850197791,0,0.170870880797853,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0.269141569828427,0,0.19318959403219,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0.407412341537585,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Lpar5 | |short_description=p5@Lpar5 | ||
}} | }} |
Latest revision as of 16:41, 26 September 2015
Short description: | p5@Lpar5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lpar5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -220bp_to_ENSMUST00000088292, ENSMUST00000140346, NM_001163269, uc009dtj.1_5end |
EntrezGene: | Lpar5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.70e-18 | 6 |
gut absorptive cell | 5.70e-18 | 6 |
enterocyte | 5.70e-18 | 6 |
columnar/cuboidal epithelial cell | 2.19e-15 | 7 |
M cell of gut | 1.77e-13 | 3 |
intestinal epithelial cell | 6.24e-12 | 9 |
epithelial cell of alimentary canal | 6.24e-12 | 9 |
epithelial cell | 5.02e-10 | 25 |
endo-epithelial cell | 4.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.83e-29 | 31 |
mucosa | 1.84e-27 | 15 |
intestinal mucosa | 9.28e-21 | 13 |
wall of intestine | 9.28e-21 | 13 |
gastrointestinal system mucosa | 9.28e-21 | 13 |
gastrointestinal system | 3.84e-18 | 47 |
organ component layer | 1.35e-16 | 24 |
epithelium of mucosa | 6.24e-12 | 9 |
gastrointestinal system epithelium | 6.24e-12 | 9 |
intestinal epithelium | 6.24e-12 | 9 |
small intestine | 1.38e-10 | 4 |
simple columnar epithelium | 9.99e-10 | 11 |
gut-associated lymphoid tissue | 4.32e-09 | 2 |
mucosa-associated lymphoid tissue | 4.32e-09 | 2 |
lymphoid tissue | 4.32e-09 | 2 |
digestive system | 7.18e-08 | 116 |
digestive tract | 7.18e-08 | 116 |
primitive gut | 7.18e-08 | 116 |
endoderm-derived structure | 1.10e-07 | 118 |
endoderm | 1.10e-07 | 118 |
presumptive endoderm | 1.10e-07 | 118 |
ileal mucosa | 6.37e-07 | 3 |
ileum | 6.37e-07 | 3 |
mucosa of small intestine | 6.37e-07 | 3 |
wall of small intestine | 6.37e-07 | 3 |