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FFCP PHASE1:Mm9::chr9:43851294..43851336,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=21838
|EntrezGene=21838
|HGNC=
|HGNC=
|MCL_coexpression_id=848
|TSSclassifier=NA
|UniProt=P01831
|UniProt=P01831
|association_with_transcript=-130bp_to_ENSMUST00000114840,NM_009382,uc009pbl.1_5end
|association_with_transcript=-130bp_to_ENSMUST00000114840,NM_009382,uc009pbl.1_5end
|cluster_id=chr9:43851294..43851336,+
|description=CAGE_peak_2_at_Thy1_5end
|description=CAGE_peak_2_at_Thy1_5end
|id=chr9:43851294..43851336,+
|id=chr9:43851294..43851336,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!8.55e-20!86;UBERON:0000153!1.86e-19!94;UBERON:0001049!1.15e-13!52;UBERON:0005068!1.15e-13!52;UBERON:0006241!1.15e-13!52;UBERON:0007135!1.15e-13!52;UBERON:0000955!2.55e-13!50;UBERON:0006238!2.55e-13!50;UBERON:0002616!8.15e-13!49;UBERON:0001017!1.44e-12!73;UBERON:0005743!1.44e-12!73;UBERON:0000073!4.48e-12!75;UBERON:0001016!4.48e-12!75;UBERON:0000033!1.01e-11!63;UBERON:0002346!4.40e-11!71;UBERON:0003075!4.40e-11!71;UBERON:0007284!4.40e-11!71;UBERON:0002020!8.15e-11!34;UBERON:0004121!9.55e-11!102;UBERON:0000924!9.55e-11!102;UBERON:0006601!9.55e-11!102;UBERON:0003056!1.32e-09!49;UBERON:0003080!4.38e-09!40;UBERON:0002780!1.60e-08!39;UBERON:0001890!1.60e-08!39;UBERON:0006240!1.60e-08!39;UBERON:0002791!1.64e-08!29;UBERON:0003528!1.64e-08!29;UBERON:0001893!1.64e-08!29;UBERON:0002370!3.07e-08!23;UBERON:0000974!3.07e-08!23;UBERON:0004807!3.07e-08!23;UBERON:0005058!3.07e-08!23;UBERON:0003351!3.07e-08!23;UBERON:0009113!3.07e-08!23;UBERON:0003295!3.07e-08!23;UBERON:0009722!3.07e-08!23;UBERON:0005562!3.07e-08!23;UBERON:0007690!3.07e-08!23;UBERON:0002619!3.60e-08!17;UBERON:0002021!7.43e-08!10;UBERON:0000411!7.43e-08!10;UBERON:0001950!7.43e-08!10;UBERON:0000064!1.09e-07!99;UBERON:0006562!1.48e-07!24;UBERON:0003408!1.48e-07!24;UBERON:0001557!1.48e-07!24;UBERON:0001042!1.48e-07!24;UBERON:0008814!1.48e-07!24;UBERON:0009145!1.48e-07!24;UBERON:0000063!4.79e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.60e-28,54;UBERON:0001049,1.55e-24,52;UBERON:0005068,1.55e-24,52;UBERON:0006241,1.55e-24,52;UBERON:0007135,1.55e-24,52;UBERON:0001017,6.56e-22,73;UBERON:0001016,4.75e-21,75;UBERON:0002020,1.48e-20,34;UBERON:0000955,2.63e-20,47;UBERON:0006238,2.63e-20,47;UBERON:0002346,1.50e-19,64;UBERON:0003075,1.50e-19,64;UBERON:0007284,1.50e-19,64;UBERON:0002616,2.53e-19,46;UBERON:0010371,3.29e-17,73;UBERON:0003080,1.32e-16,40;UBERON:0004121,1.47e-16,95;UBERON:0000924,1.47e-16,95;UBERON:0006601,1.47e-16,95;UBERON:0003528,1.91e-16,29;UBERON:0002791,1.91e-16,29;UBERON:0001893,1.91e-16,29;UBERON:0002780,1.92e-15,39;UBERON:0001890,1.92e-15,39;UBERON:0006240,1.92e-15,39;UBERON:0002619,6.35e-15,17;UBERON:0002021,9.03e-15,10;UBERON:0000411,9.03e-15,10;UBERON:0001950,9.03e-15,10;UBERON:0003056,1.50e-13,49;UBERON:0000956,2.24e-13,21;UBERON:0001869,2.24e-13,21;UBERON:0000203,2.24e-13,21;UBERON:0010314,7.44e-11,92;UBERON:0011216,4.58e-10,194;UBERON:0002370,4.81e-10,23;UBERON:0000974,4.81e-10,23;UBERON:0004807,4.81e-10,23;UBERON:0005058,4.81e-10,23;UBERON:0003351,4.81e-10,23;UBERON:0009113,4.81e-10,23;UBERON:0003295,4.81e-10,23;UBERON:0009722,4.81e-10,23;UBERON:0005562,4.81e-10,23;UBERON:0007690,4.81e-10,23;UBERON:0000483,5.80e-10,174;UBERON:0000119,1.03e-09,176;UBERON:0006562,1.76e-09,24;UBERON:0003408,1.76e-09,24;UBERON:0001557,1.76e-09,24;UBERON:0001042,1.76e-09,24;UBERON:0008814,1.76e-09,24;UBERON:0009145,1.76e-09,24;UBERON:0003076,1.05e-08,12;UBERON:0003057,1.05e-08,12;UBERON:0000072,4.73e-08,27;UBERON:0004177,2.87e-07,29;UBERON:0005057,2.87e-07,29
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0,0,0,0,0,1.10556277196391,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0,0,0.872100625521786,1.75748946187577,1.36100929351998,0.279972843250725,0,0,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,0.768436610643109,0,0,0,4.28476476605705,6.84692476950002,0,0,0.919218786610021,12.1127469099328,9.19348834213351,6.75868746327471,0.263772575460388,0.182975287204819,0,3.07101298901519,3.93933827022176,3.51435969886663,4.41942878210502,2.84743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0.913396434936424,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,1.46612694769419,0.255457055208591,0.239630249011841,0,0,4.79330046095433,4.57500602818627,1.25654352112864,4.69325664519146,4.60287823194595,8.72709787150152,5.353961681236,0.509196819251581,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.816437989815934,0.12811372028485,0.843315521037559,1.55222022443409,0,0,0,0,0.834141747676794,1.39300866608867,1.23469281844766,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,4.41608891984667,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.631222379012867,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,2.72936002979246,2.34423373184406,0.491804836130026,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.790575555893047,1.92792789853084,0.283880170416537,0.35613120733451,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,1.70219802876894,0,0,0,0,0.535106452806212,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,2.09903754704677,0.72375509913787,0.596861720015682,0.164140899745061,0,3.33765543618917,0.170870880797853,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.104859344425711,0,0,7.90027801570446,0.810900861160657,3.28675062927447,4.54722880422283,8.23522800070415,5.16571522431289,4.32703618271888,6.64602872285597,6.66378569657774,4.87723562591999,4.94048307170519,5.45764132142614,4.42574471545516,5.61009130471531,0,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,5.64751842617067,7.82552902062201,10.8850147553485,4.1244763762485,4.11049511862385,1.5107877947794,4.72515750162264,3.60256962579376,2.71885445390523,3.62432218226274,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.888986911206461,0.412070114477788,0,0.758091635291392,1.2673964994512,0.754505365544305,0.468207537349412,0.448176066834085,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.950628796921032,0,0.118635018124174,0.394017929502254,0.409231043169689,0.464810523557898,0.771626443924566,0.999242311751784,0.467863216890817,0.859484216193193,1.3390183244819,0.882365676478062,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.468129052643987,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0,0,0,0,0,1.10556277196391,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,0,0,0.872100625521786,1.75748946187577,1.36100929351998,0.279972843250725,0,0,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,0.768436610643109,0,0,0,4.28476476605705,6.84692476950002,0,0,0.919218786610021,12.1127469099328,9.19348834213351,6.75868746327471,0.263772575460388,0.182975287204819,0,3.07101298901519,3.93933827022176,3.51435969886663,4.41942878210502,2.84743361598206,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0.913396434936424,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0.220841518460394,0,0,2.04946557908083,1.46612694769419,0.255457055208591,0.239630249011841,0,0,4.79330046095433,4.57500602818627,1.25654352112864,4.69325664519146,4.60287823194595,8.72709787150152,5.353961681236,0.509196819251581,0,0,0.420883711772948,0,0,0.180062129805349,0.60281927134286,0.816437989815934,0.12811372028485,0.843315521037559,1.55222022443409,0,0,0,0,0.834141747676794,1.39300866608867,1.23469281844766,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.292399974850665,0.439100230582101,0.134206418760372,4.41608891984667,1.13195073617213,0,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.387904974335251,0.631222379012867,0.379419222745544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44292937929755,0,0,0,0,0,0,0,0,2.72936002979246,2.34423373184406,0.491804836130026,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.790575555893047,1.92792789853084,0.283880170416537,0.35613120733451,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0.712994756769443,0,0,0,1.70219802876894,0,0,0,0,0.535106452806212,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,2.09903754704677,0.72375509913787,0.596861720015682,0.164140899745061,0,3.33765543618917,0.170870880797853,0,0,0.188368457004691,0,0,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0,0.404593039154462,0.247960367176008,0,0.129614973291793,0,0.56369293868419,0,0,0.194451188344048,0,0,0.117357238645754,0,0.104859344425711,0,0,7.90027801570446,0.810900861160657,3.28675062927447,4.54722880422283,8.23522800070415,5.16571522431289,4.32703618271888,6.64602872285597,6.66378569657774,4.87723562591999,4.94048307170519,5.45764132142614,4.42574471545516,5.61009130471531,0,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,5.64751842617067,7.82552902062201,10.8850147553485,4.1244763762485,4.11049511862385,1.5107877947794,4.72515750162264,3.60256962579376,2.71885445390523,3.62432218226274,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.888986911206461,0.412070114477788,0,0.758091635291392,1.2673964994512,0.754505365544305,0.468207537349412,0.448176066834085,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0,0,0,0.532427418478012,0.238436189947321,0.145346416632329,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.950628796921032,0,0.118635018124174,0.394017929502254,0.409231043169689,0.464810523557898,0.771626443924566,0.999242311751784,0.467863216890817,0.859484216193193,1.3390183244819,0.882365676478062,0.231867835620421
|short_description=p2@Thy1
|short_description=p2@Thy1
}}
}}

Latest revision as of 16:27, 26 September 2015

Short description:p2@Thy1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Thy1_5end
Coexpression cluster:MCL_coexpression_mm9:848
Association with transcript: -130bp_to_ENSMUST00000114840, NM_009382, uc009pbl.1_5end
EntrezGene:Thy1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Thy1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C46.66
thymus, neonate N07.CNhs11211.713-19D34.88
thymus, neonate N10.CNhs11194.748-24E44.94
thymus, neonate N20.CNhs11186.820-7A25.46
thymus, neonate N25.CNhs11125.1362-25G74.43
thymus, neonate N30.CNhs11132.1393-42G25.61
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.60e-2854
neural tube1.55e-2452
neural rod1.55e-2452
future spinal cord1.55e-2452
neural keel1.55e-2452
central nervous system6.56e-2273
nervous system4.75e-2175
gray matter1.48e-2034
brain2.63e-2047
future brain2.63e-2047
neurectoderm1.50e-1964
neural plate1.50e-1964
presumptive neural plate1.50e-1964
regional part of brain2.53e-1946
ecto-epithelium3.29e-1773
anterior neural tube1.32e-1640
ectoderm-derived structure1.47e-1695
ectoderm1.47e-1695
presumptive ectoderm1.47e-1695
brain grey matter1.91e-1629
regional part of telencephalon1.91e-1629
telencephalon1.91e-1629
regional part of forebrain1.92e-1539
forebrain1.92e-1539
future forebrain1.92e-1539
regional part of cerebral cortex6.35e-1517
occipital lobe9.03e-1510
visual cortex9.03e-1510
neocortex9.03e-1510
pre-chordal neural plate1.50e-1349
cerebral cortex2.24e-1321
cerebral hemisphere2.24e-1321
pallium2.24e-1321
structure with developmental contribution from neural crest7.44e-1192
organ system subdivision4.58e-10194
thymus4.81e-1023
neck4.81e-1023
respiratory system epithelium4.81e-1023
hemolymphoid system gland4.81e-1023
pharyngeal epithelium4.81e-1023
thymic region4.81e-1023
pharyngeal gland4.81e-1023
entire pharyngeal arch endoderm4.81e-1023
thymus primordium4.81e-1023
early pharyngeal endoderm4.81e-1023
epithelium5.80e-10174
cell layer1.03e-09176
pharynx1.76e-0924
gland of gut1.76e-0924
upper respiratory tract1.76e-0924
chordate pharynx1.76e-0924
pharyngeal arch system1.76e-0924
pharyngeal region of foregut1.76e-0924
posterior neural tube1.05e-0812
chordal neural plate1.05e-0812
segment of respiratory tract4.73e-0827
hemopoietic organ2.87e-0729
immune organ2.87e-0729
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