FFCP PHASE1:Mm9::chr17:51971960..51971979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20230 | |EntrezGene=20230 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q60611 | |UniProt=Q60611 | ||
|association_with_transcript=0bp_to_NM_009122,uc008czf.2_5end | |association_with_transcript=0bp_to_NM_009122,uc008czf.2_5end | ||
|cluster_id=chr17:51971960..51971979,- | |||
|description=CAGE_peak_1_at_Satb1_5end | |description=CAGE_peak_1_at_Satb1_5end | ||
|id=chr17:51971960..51971979,- | |id=chr17:51971960..51971979,- | ||
|ontology_enrichment_celltype=CL:0000838!5.05e-09!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000791!3.10e-07!9;CL:0000789!3.10e-07!9;CL:0002420!3.10e-07!9;CL:0002419!3.10e-07!9;CL:0000790!3.10e-07!9 | |ontology_enrichment_celltype=CL:0000838!5.05e-09!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000791!3.10e-07!9;CL:0000789!3.10e-07!9;CL:0002420!3.10e-07!9;CL:0002419!3.10e-07!9;CL:0000790!3.10e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.16e-11,12;CL:0000084,1.41e-10,11;CL:0000827,1.41e-10,11;CL:0000542,3.94e-10,13;CL:0000051,3.94e-10,13;CL:0000791,4.83e-09,9;CL:0000789,4.83e-09,9;CL:0002420,4.83e-09,9;CL:0002419,4.83e-09,9;CL:0000790,4.83e-09,9;CL:0000624,3.25e-08,8;CL:0002031,1.27e-07,25;CL:0000988,5.52e-07,32;CL:0002032,5.52e-07,32;CL:0000037,5.52e-07,32;CL:0000837,5.52e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.16e-11!29;UBERON:0002370!7.01e-11!23;UBERON:0000974!7.01e-11!23;UBERON:0004807!7.01e-11!23;UBERON:0005058!7.01e-11!23;UBERON:0003351!7.01e-11!23;UBERON:0009113!7.01e-11!23;UBERON:0003295!7.01e-11!23;UBERON:0009722!7.01e-11!23;UBERON:0005562!7.01e-11!23;UBERON:0007690!7.01e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0006562!6.73e-10!24;UBERON:0001557!6.73e-10!24;UBERON:0001042!6.73e-10!24;UBERON:0008814!6.73e-10!24;UBERON:0009145!6.73e-10!24;UBERON:0002390!5.34e-08!45;UBERON:0003061!5.34e-08!45;UBERON:0002193!7.96e-08!48;UBERON:0000072!1.76e-07!27;UBERON:0000065!4.45e-07!41;UBERON:0001004!4.54e-07!42 | |ontology_enrichment_uberon=UBERON:0004177!1.16e-11!29;UBERON:0002370!7.01e-11!23;UBERON:0000974!7.01e-11!23;UBERON:0004807!7.01e-11!23;UBERON:0005058!7.01e-11!23;UBERON:0003351!7.01e-11!23;UBERON:0009113!7.01e-11!23;UBERON:0003295!7.01e-11!23;UBERON:0009722!7.01e-11!23;UBERON:0005562!7.01e-11!23;UBERON:0007690!7.01e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0006562!6.73e-10!24;UBERON:0001557!6.73e-10!24;UBERON:0001042!6.73e-10!24;UBERON:0008814!6.73e-10!24;UBERON:0009145!6.73e-10!24;UBERON:0002390!5.34e-08!45;UBERON:0003061!5.34e-08!45;UBERON:0002193!7.96e-08!48;UBERON:0000072!1.76e-07!27;UBERON:0000065!4.45e-07!41;UBERON:0001004!4.54e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.07e-15,23;UBERON:0000974,5.07e-15,23;UBERON:0004807,5.07e-15,23;UBERON:0005058,5.07e-15,23;UBERON:0003351,5.07e-15,23;UBERON:0009113,5.07e-15,23;UBERON:0003295,5.07e-15,23;UBERON:0009722,5.07e-15,23;UBERON:0005562,5.07e-15,23;UBERON:0007690,5.07e-15,23;UBERON:0004177,4.36e-14,29;UBERON:0005057,4.36e-14,29;UBERON:0006562,5.07e-14,24;UBERON:0003408,5.07e-14,24;UBERON:0001557,5.07e-14,24;UBERON:0001042,5.07e-14,24;UBERON:0008814,5.07e-14,24;UBERON:0009145,5.07e-14,24;UBERON:0000072,1.70e-11,27;UBERON:0000065,1.11e-10,41;UBERON:0002390,3.10e-10,45;UBERON:0003061,3.10e-10,45;UBERON:0001004,3.53e-10,42;UBERON:0000077,4.95e-10,35;UBERON:0002193,6.19e-10,48;UBERON:0002405,6.19e-10,48 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,31.5060909197446,180.913507964892,195.677944005187,34.243593645101,68.1254237820173,78.7523357683546,82.1751782738576,2.33176833270964,3.03712901084739,0.699561878128147,12.4607555316504,9.04955261797876,20.3707032863054,13.0116233931137,30.4823220186718,24.291580389921,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,4.70585190424811,4.09827290975067,1.45653105909346,0,0,0,0,0,0,0.194429899074283,0,0,54.5293469687643,102.2760620236,68.2270412259202,0.257259436035947,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,2.07379224616955,1.75507719831198,1.89292465216244,1.42825492201902,1.10434270475807,0.979926393719632,1.15014565221884,0,0,0,0.307213066512487,0.791317726381163,0.365950574409639,1.56274011167028,0,0,0.45839474333043,3.24091444021034,3.55929201997757,2.60959224155421,0.151452386666368,0.151143120213571,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,6.96521666286266,20.1971549244794,0.445326417194474,0.173485326766136,1.82679286987285,0.922461989024234,0.753613202763113,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0,7.42853771936706,2.39961092397363,2.28726408731516,0,0,0.753926112677186,1.21677024134594,2.30143911597297,0.20778804455956,0.162241263067758,0.203678727700633,1.61729061793121,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.544291993210623,0.896796041993948,0.187403449119458,0.258703370739016,0.215567992932842,0.756424320671277,0,0.657587197282725,0.556094498451196,2.43776516565517,1.64625709126355,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,2.80236821681207,0,2.79084688934462,2.59420190546738,5.26319954731196,1.75640092232841,0.805238512562231,0.630869845692382,4.21908910755066,0,0,0.213288250535234,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.658795818896044,1.50801125280162,0.397912944082302,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,2.40179147216586,0,0,0,0,6.19773152534718,0.238043640886014,1.75620283072019,1.41871629695572,0.8858587585951,1.59454768657487,2.78567635016755,2.59027472798843,1.3018415272336,0,0,0,1.10374698521893,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0.809621403349789,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.882113592219848,0,2.58343082713449,1.02531972377865,0.477489376012546,0.164140899745061,0.582961673259701,0.370850604021019,3.41741761595705,0.206386867963223,0.555583582109135,0.941842285023455,4.37421528707281,5.49067615695654,13.7682528295023,9.37674730568509,8.7065983496787,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,263.237263483272,2.22997736819181,6.47079030138412,51.7084875451624,133.195861576606,181.396076915295,306.258005376881,276.917863452332,360.450226314887,334.471674408794,413.689837616457,478.908025955143,408.611691446479,491.233619869134,0,2.44184548711471,24.7610244242153,1.67884616364078,0.386379188064381,0,0.183151624267265,0,1.00314420807073,4.51801474093653,4.60325236507177,3.43737308063638,3.95262319390481,0.685082519770642,1.5107877947794,4.05013500139084,2.70192721934532,2.26571204492102,1.55328093525546,0,0,0.512200817262403,1.70174701947806,0.419226325255965,1.10306105070008,0.888986911206461,1.44224540067226,0.64183841918363,2.02157769411038,1.52087579934144,3.58390048633545,1.31098110457835,1.6646539625266,1.89537047553524,1.90517476513229,0.811190281613988,1.35036454324594,2.06042950401653,1.76638704161277,2.05721551431249,3.37204031702741,2.86123427936785,2.32554266611726,1.97629698872194,2.11536519729191,2.0122077016005,0.789209134313529,2.17286582153379,1.68342681497322,1.54225523561426,2.46261205938909,0.818462086339379,2.94379998253335,2.3148793317737,1.49886346762768,2.33931608445408,1.71896843238639,1.3390183244819,1.10295709559758,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,31.5060909197446,180.913507964892,195.677944005187,34.243593645101,68.1254237820173,78.7523357683546,82.1751782738576,2.33176833270964,3.03712901084739,0.699561878128147,12.4607555316504,9.04955261797876,20.3707032863054,13.0116233931137,30.4823220186718,24.291580389921,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,4.70585190424811,4.09827290975067,1.45653105909346,0,0,0,0,0,0,0.194429899074283,0,0,54.5293469687643,102.2760620236,68.2270412259202,0.257259436035947,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,2.07379224616955,1.75507719831198,1.89292465216244,1.42825492201902,1.10434270475807,0.979926393719632,1.15014565221884,0,0,0,0.307213066512487,0.791317726381163,0.365950574409639,1.56274011167028,0,0,0.45839474333043,3.24091444021034,3.55929201997757,2.60959224155421,0.151452386666368,0.151143120213571,0,0,0,0,0,0,5.75822122540183,0,0,0,0,0,0,0,0,0,0,6.96521666286266,20.1971549244794,0.445326417194474,0.173485326766136,1.82679286987285,0.922461989024234,0.753613202763113,0.470354828542819,0.125666591329675,0,0.433798070759735,0,0.323533699894818,0.883366073841574,0.484875253135222,1.86391761218122,0,0,0,7.42853771936706,2.39961092397363,2.28726408731516,0,0,0.753926112677186,1.21677024134594,2.30143911597297,0.20778804455956,0.162241263067758,0.203678727700633,1.61729061793121,0,0.631325567659422,0,0,0.180062129805349,0.452114453507145,0.544291993210623,0.896796041993948,0.187403449119458,0.258703370739016,0.215567992932842,0.756424320671277,0,0.657587197282725,0.556094498451196,2.43776516565517,1.64625709126355,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,2.80236821681207,0,2.79084688934462,2.59420190546738,5.26319954731196,1.75640092232841,0.805238512562231,0.630869845692382,4.21908910755066,0,0,0.213288250535234,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.658795818896044,1.50801125280162,0.397912944082302,0.779856348476481,0.898819408654221,0,0.398282546508734,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0,0,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.936113019343682,0.252578877947112,0,0,2.40179147216586,0,0,0,0,6.19773152534718,0.238043640886014,1.75620283072019,1.41871629695572,0.8858587585951,1.59454768657487,2.78567635016755,2.59027472798843,1.3018415272336,0,0,0,1.10374698521893,0.481651769963376,0,0,0,0.315508219416257,0,0,0,0,0,0.809621403349789,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,1.06949213515416,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.882113592219848,0,2.58343082713449,1.02531972377865,0.477489376012546,0.164140899745061,0.582961673259701,0.370850604021019,3.41741761595705,0.206386867963223,0.555583582109135,0.941842285023455,4.37421528707281,5.49067615695654,13.7682528295023,9.37674730568509,8.7065983496787,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.777689839750757,0.621339313086926,0,0.448549638131936,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,263.237263483272,2.22997736819181,6.47079030138412,51.7084875451624,133.195861576606,181.396076915295,306.258005376881,276.917863452332,360.450226314887,334.471674408794,413.689837616457,478.908025955143,408.611691446479,491.233619869134,0,2.44184548711471,24.7610244242153,1.67884616364078,0.386379188064381,0,0.183151624267265,0,1.00314420807073,4.51801474093653,4.60325236507177,3.43737308063638,3.95262319390481,0.685082519770642,1.5107877947794,4.05013500139084,2.70192721934532,2.26571204492102,1.55328093525546,0,0,0.512200817262403,1.70174701947806,0.419226325255965,1.10306105070008,0.888986911206461,1.44224540067226,0.64183841918363,2.02157769411038,1.52087579934144,3.58390048633545,1.31098110457835,1.6646539625266,1.89537047553524,1.90517476513229,0.811190281613988,1.35036454324594,2.06042950401653,1.76638704161277,2.05721551431249,3.37204031702741,2.86123427936785,2.32554266611726,1.97629698872194,2.11536519729191,2.0122077016005,0.789209134313529,2.17286582153379,1.68342681497322,1.54225523561426,2.46261205938909,0.818462086339379,2.94379998253335,2.3148793317737,1.49886346762768,2.33931608445408,1.71896843238639,1.3390183244819,1.10295709559758,0.463735671240843 | ||
|short_description=p1@Satb1 | |short_description=p1@Satb1 | ||
}} | }} |
Latest revision as of 16:04, 26 September 2015
Short description: | p1@Satb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Satb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_NM_009122, uc008czf.2_5end |
EntrezGene: | Satb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.16e-11 | 12 |
T cell | 1.41e-10 | 11 |
pro-T cell | 1.41e-10 | 11 |
lymphocyte | 3.94e-10 | 13 |
common lymphoid progenitor | 3.94e-10 | 13 |
mature alpha-beta T cell | 4.83e-09 | 9 |
alpha-beta T cell | 4.83e-09 | 9 |
immature T cell | 4.83e-09 | 9 |
mature T cell | 4.83e-09 | 9 |
immature alpha-beta T cell | 4.83e-09 | 9 |
CD4-positive, alpha-beta T cell | 3.25e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.27e-07 | 25 |
hematopoietic cell | 5.52e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.52e-07 | 32 |
hematopoietic stem cell | 5.52e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.07e-15 | 23 |
neck | 5.07e-15 | 23 |
respiratory system epithelium | 5.07e-15 | 23 |
hemolymphoid system gland | 5.07e-15 | 23 |
pharyngeal epithelium | 5.07e-15 | 23 |
thymic region | 5.07e-15 | 23 |
pharyngeal gland | 5.07e-15 | 23 |
entire pharyngeal arch endoderm | 5.07e-15 | 23 |
thymus primordium | 5.07e-15 | 23 |
early pharyngeal endoderm | 5.07e-15 | 23 |
hemopoietic organ | 4.36e-14 | 29 |
immune organ | 4.36e-14 | 29 |
pharynx | 5.07e-14 | 24 |
gland of gut | 5.07e-14 | 24 |
upper respiratory tract | 5.07e-14 | 24 |
chordate pharynx | 5.07e-14 | 24 |
pharyngeal arch system | 5.07e-14 | 24 |
pharyngeal region of foregut | 5.07e-14 | 24 |
segment of respiratory tract | 1.70e-11 | 27 |
respiratory tract | 1.11e-10 | 41 |
hematopoietic system | 3.10e-10 | 45 |
blood island | 3.10e-10 | 45 |
respiratory system | 3.53e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 4.95e-10 | 35 |
hemolymphoid system | 6.19e-10 | 48 |
immune system | 6.19e-10 | 48 |