FFCP PHASE1:Mm9::chr6:124683085..124683138,-: Difference between revisions
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{{FFCP|EntrezGene=15170|HGNC=|MCL_coexpression_id=36|UniProt=G3UXM2|association_with_transcript=0bp_to_ENSMUST00000172770,ENSMUST00000173647_5end|description=CAGE_peak_1_at_Ptpn6_5end|id=chr6:124683085..124683138,-|ontology_enrichment_celltype=CL:0000988!2.71e-11!32;CL:0002032!2.71e-11!32;CL:0000037!2.71e-11!32;CL:0000566!2.71e-11!32;CL:0000837!2.71e-11!32;CL:0002031!5.63e-09!25;CL:0000738!3.40e-08!17;CL:0002087!3.40e-08!17;CL:0000838!4.44e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,2.18e-11,32;CL:0002032,2.18e-11,32;CL:0000037,2.18e-11,32;CL:0000837,2.18e-11,32;CL:0002031,4.58e-09,25;CL:0000738,3.32e-08,17;CL:0002087,3.32e-08,17;CL:0000838,4.36e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.02e-19!48;UBERON:0002405!1.35e-18!70;UBERON:0002390!1.17e-17!45;UBERON:0003061!1.17e-17!45;UBERON:0002371!4.16e-10!16;UBERON:0001474!4.53e-10!22;UBERON:0004765!4.53e-10!22;UBERON:0001434!4.53e-10!22;UBERON:0000926!2.62e-09!193;UBERON:0004120!2.62e-09!193;UBERON:0006603!2.62e-09!193;UBERON:0001041!4.22e-09!92;UBERON:0001007!5.38e-09!128;UBERON:0001555!5.38e-09!128;UBERON:0007026!5.38e-09!128;UBERON:0005057!5.49e-09!51;UBERON:0004177!6.80e-09!29;UBERON:0004119!8.80e-09!130;UBERON:0000925!8.80e-09!130;UBERON:0006595!8.80e-09!130;UBERON:0000077!1.21e-08!97;UBERON:0004921!2.11e-08!126;UBERON:0004185!2.11e-08!126;UBERON:0003104!1.30e-07!131;UBERON:0009142!1.30e-07!131;UBERON:0003081!1.66e-07!88;UBERON:0002204!2.66e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.05e-19,48;UBERON:0002405,2.05e-19,48;UBERON:0002390,6.04e-18,45;UBERON:0003061,6.04e-18,45;UBERON:0002371,4.03e-10,16;UBERON:0001474,4.40e-10,22;UBERON:0004765,4.40e-10,22;UBERON:0001434,4.40e-10,22;UBERON:0004177,4.01e-09,29;UBERON:0005057,4.01e-09,29;UBERON:0001041,7.02e-09,80;UBERON:0001007,1.29e-08,116;UBERON:0001555,1.29e-08,116;UBERON:0007026,1.29e-08,116;UBERON:0004119,2.16e-08,118;UBERON:0000925,2.16e-08,118;UBERON:0006595,2.16e-08,118;UBERON:0004921,4.94e-08,114;UBERON:0002204,2.43e-07,32;UBERON:0003081,3.39e-07,87;UBERON:0000077,4.65e-07,35;UBERON:0005911,8.73e-07,69|phase1_expression=3.04282809499109,7.32848356042658,7.27998783023258,0,0,19.809754085603,8.64366770203445,74.2459109789064,25.6235474316033,41.4294211589928,33.558721772199,39.9658516566635,91.2499890533327,105.866107329406,68.9537206958422,66.6143629712527,30.7807226376385,295.114855692631,245.160607287061,244.448439435665,6.54833334163237,111.603029149795,82.2779335787646,35.9982951285165,35.7878478464785,6.89078356938024,8.61523992318149,11.4199753323521,2.28028103347649,2.52030129759931,8.20402889424627,1.27006134691926,1.23012957516914,0,2.02196133825892,1.99481574430191,3.26670970019791,488.007881439234,334.411527456187,415.677852715196,554.114061725215,556.682070241133,556.394864573702,1.25896817975577,0.101376931219515,0.550640256485045,2.34717403304412,0.872100625521786,0.219686182734472,0,2.2397827460058,1.43752564364972,242.278083147371,46.423177088726,56.463758255934,1.28629718017973,2.0057340795713,3.6097046459421,1.01158230429799,1.05798195854407,0.633831403506179,0.338844532069132,0.889294796111139,215.525982288895,205.684203413931,223.801236208022,59.0212217721257,35.348084089583,0.933206510776299,0.675029691658453,1.05162480675691,3.42781181284564,1.10434270475807,0.857435594504678,0.479227355091182,0.919218786610021,1.10115880999389,2.55374676170375,1.22885226604995,0.659431438650969,0.548925861614458,1.04182674111352,2.51264699101243,1.12552522006336,1.5279824777681,1.17851434189467,2.84743361598206,1.86399445825301,0.757261933331841,0.226714680320357,0,6.0229671388697,0,1.07940638327563,1.94932925234301,0.896053774194671,16.7128859956785,0.170430322578058,0.519572009205738,0.70667914902068,2.25349471642689,0,0,0,1.29894624606728,1.01343946190039,1.51657333504435,12.5602267690966,160.023612093952,13.0629082377046,5.20455980298408,2.74018930480927,3.22861696158482,2.86373017049983,3.41007250693544,5.40366342717605,0.988779870937496,7.80836527367523,92.8841079547368,11.0001457964238,39.7514733228708,32.0017667069247,7.45567044872489,0.585561594023094,1.46612694769419,11.240110429178,74.1655620691647,64.1895922162946,83.4851391870035,1.49790639404823,1.37250180845588,1.13088916901578,1.56441888173049,1.53429274398198,1.66230435647648,2.59586020908412,4.17541391786297,48.5187185379363,3.53811861807145,3.15662783829711,2.21204753036596,1.37941262660084,1.62055916824814,2.10986744970001,1.08858398642125,1.0249097622788,2.15513966487376,1.81092359517311,2.58681591519411,1.32374256117473,1.75951124163949,3.72632745126877,1.66828349535359,4.179025998266,5.55611768301447,3.58261680273288,68.816892356697,57.9032791008109,69.9042208513158,1.65700618028402,1.40715635988658,1.98068267607116,2.3674473558521,2.55793501271625,1.3884040159864,0.930135779001631,1.3413670069981,2.33530684734339,1.31647879930784,3.94001913789829,4.70199095365963,5.26319954731196,15.3685080703735,7.51555945058082,1.4720296399488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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15170 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=G3UXM2 | |||
|association_with_transcript=0bp_to_ENSMUST00000172770,ENSMUST00000173647_5end | |||
|cluster_id=chr6:124683085..124683138,- | |||
|description=CAGE_peak_1_at_Ptpn6_5end | |||
|id=chr6:124683085..124683138,- | |||
|ontology_enrichment_celltype=CL:0000988!2.71e-11!32;CL:0002032!2.71e-11!32;CL:0000037!2.71e-11!32;CL:0000566!2.71e-11!32;CL:0000837!2.71e-11!32;CL:0002031!5.63e-09!25;CL:0000738!3.40e-08!17;CL:0002087!3.40e-08!17;CL:0000838!4.44e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.18e-11,32;CL:0002032,2.18e-11,32;CL:0000037,2.18e-11,32;CL:0000837,2.18e-11,32;CL:0002031,4.58e-09,25;CL:0000738,3.32e-08,17;CL:0002087,3.32e-08,17;CL:0000838,4.36e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.02e-19!48;UBERON:0002405!1.35e-18!70;UBERON:0002390!1.17e-17!45;UBERON:0003061!1.17e-17!45;UBERON:0002371!4.16e-10!16;UBERON:0001474!4.53e-10!22;UBERON:0004765!4.53e-10!22;UBERON:0001434!4.53e-10!22;UBERON:0000926!2.62e-09!193;UBERON:0004120!2.62e-09!193;UBERON:0006603!2.62e-09!193;UBERON:0001041!4.22e-09!92;UBERON:0001007!5.38e-09!128;UBERON:0001555!5.38e-09!128;UBERON:0007026!5.38e-09!128;UBERON:0005057!5.49e-09!51;UBERON:0004177!6.80e-09!29;UBERON:0004119!8.80e-09!130;UBERON:0000925!8.80e-09!130;UBERON:0006595!8.80e-09!130;UBERON:0000077!1.21e-08!97;UBERON:0004921!2.11e-08!126;UBERON:0004185!2.11e-08!126;UBERON:0003104!1.30e-07!131;UBERON:0009142!1.30e-07!131;UBERON:0003081!1.66e-07!88;UBERON:0002204!2.66e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.05e-19,48;UBERON:0002405,2.05e-19,48;UBERON:0002390,6.04e-18,45;UBERON:0003061,6.04e-18,45;UBERON:0002371,4.03e-10,16;UBERON:0001474,4.40e-10,22;UBERON:0004765,4.40e-10,22;UBERON:0001434,4.40e-10,22;UBERON:0004177,4.01e-09,29;UBERON:0005057,4.01e-09,29;UBERON:0001041,7.02e-09,80;UBERON:0001007,1.29e-08,116;UBERON:0001555,1.29e-08,116;UBERON:0007026,1.29e-08,116;UBERON:0004119,2.16e-08,118;UBERON:0000925,2.16e-08,118;UBERON:0006595,2.16e-08,118;UBERON:0004921,4.94e-08,114;UBERON:0002204,2.43e-07,32;UBERON:0003081,3.39e-07,87;UBERON:0000077,4.65e-07,35;UBERON:0005911,8.73e-07,69 | |||
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| |||
|short_description=p1@Ptpn6 | |||
}} |
Latest revision as of 15:57, 26 September 2015
Short description: | p1@Ptpn6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptpn6_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000172770, ENSMUST00000173647_5end |
EntrezGene: | Ptpn6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.18e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.18e-11 | 32 |
hematopoietic stem cell | 2.18e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.18e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.58e-09 | 25 |
leukocyte | 3.32e-08 | 17 |
nongranular leukocyte | 3.32e-08 | 17 |
lymphoid lineage restricted progenitor cell | 4.36e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.05e-19 | 48 |
immune system | 2.05e-19 | 48 |
hematopoietic system | 6.04e-18 | 45 |
blood island | 6.04e-18 | 45 |
bone marrow | 4.03e-10 | 16 |
bone element | 4.40e-10 | 22 |
skeletal element | 4.40e-10 | 22 |
skeletal system | 4.40e-10 | 22 |
hemopoietic organ | 4.01e-09 | 29 |
immune organ | 4.01e-09 | 29 |
foregut | 7.02e-09 | 80 |
digestive system | 1.29e-08 | 116 |
digestive tract | 1.29e-08 | 116 |
primitive gut | 1.29e-08 | 116 |
endoderm-derived structure | 2.16e-08 | 118 |
endoderm | 2.16e-08 | 118 |
presumptive endoderm | 2.16e-08 | 118 |
subdivision of digestive tract | 4.94e-08 | 114 |
musculoskeletal system | 2.43e-07 | 32 |
lateral plate mesoderm | 3.39e-07 | 87 |
mixed endoderm/mesoderm-derived structure | 4.65e-07 | 35 |
endo-epithelium | 8.73e-07 | 69 |