Personal tools

FFCP PHASE1:Mm9::chr4:141349733..141349763,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=12371|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000138359_5end|description=CAGE_peak_1_at_Casp9_5end|id=chr4:141349733..141349763,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!7.07e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-08,31;UBERON:0004923,7.07e-07,24|phase1_expression=3.52327463630547,16.40184415905,17.2899710968024,26.616850595001,34.0609096363516,12.255186849568,9.34450562382103,3.74457637980571,0.422366166455,0.234064526321993,0.856089841127525,0.8774937489487,3.25281386869291,5.59490575481583,4.99664642723494,7.89653542820321,7.69518065940961,13.249410945046,12.614527891728,12.3072999021429,8.75945888556019,8.43973085207525,8.61959304158487,13.2793710918528,11.9292826154928,17.2269589234506,8.61523992318149,11.4199753323521,11.9714754257516,8.82105454159758,8.64748991555688,12.065582795733,20.2971379902908,0,8.66554859253824,4.65457007003779,5.10423390655923,20.0895182753716,21.0960543021426,14.1351410872926,25.2939539853336,24.589637458504,16.0218416500281,4.65818226509636,5.27160042341476,5.68994931701213,15.6478268869608,7.19483016055474,10.1055644057857,7.58276606389705,10.7789544651529,4.31257693094915,4.02678254538567,2.17608642603403,3.02484419228218,9.51859913333004,12.6074713573053,13.9231464914909,3.43937983461316,4.23192783417626,6.97214543856797,7.79342423759004,8.00365316500025,31.0465402462083,24.7216590641744,26.2877642530057,13.7816050838466,13.831858991576,4.25127410464758,4.72520784160917,3.57552434297349,6.85562362569129,5.96345060569357,3.67472397644862,2.58782771749238,3.67687514644008,11.0115880999389,3.83062014255563,4.45458946443106,4.87979264601717,4.39140689291566,4.16730696445408,6.42120897703176,5.06486349028512,6.1119299110724,4.12480019663135,2.98980529678116,3.35519002485541,6.28527404665428,7.85944225110569,12.7540375028738,10.3250865237766,4.0798280022465,16.7307989407723,8.4470934268197,9.40856462904405,7.8648875273781,15.3387290320252,11.1707981979234,12.7202246823722,4.92951969218382,25.6652954828636,20.3844191765317,14.2213340630666,7.14420435337007,6.33399663687746,5.05524445014783,10.0481814152773,8.54495016035667,8.31275978763019,6.59244241711316,7.30717147949139,6.91846491768175,6.33035090321015,8.34879820663504,7.41432888845085,8.89901883843746,5.49477556295664,9.73071607144862,4.36770494858005,4.41683036920787,5.81850303762267,7.45567044872489,5.5628351432194,6.70229461803056,10.2182822083437,1.55759661857696,0.599902730993408,3.43089613097275,3.59497534571574,1.37250180845588,1.88481528169297,2.08589184230732,2.30143911597297,4.1557608911912,2.59586020908412,4.78645010096487,9.33052279575698,9.35074206204597,13.4682787767343,4.55421550369463,8.96618207290544,3.96136685571768,6.93242162044289,7.27990540919208,5.12454881139399,7.68354141389776,11.1242449417777,4.95806383745537,3.40390944302075,2.63926686245923,3.28793598641362,2.78047249225598,4.179025998266,3.2925141825271,7.16523360546575,6.31991868581911,4.63226232806487,3.40996199274711,5.59239585845855,5.62862543954631,5.22179978236943,4.26140524053378,5.50939848892731,4.9365476123961,3.48800917125612,5.633741429392,5.7215017759913,7.07607354627966,4.59668899421467,6.24229833503089,6.28659945928929,6.80605357402257,8.58921080066379,2.10289948564127,2.26390147234426,14.5384264512871,13.2225283331772,6.61193576659225,5.34144345279009,5.92790322081629,6.25218926332362,8.45036566610507,8.75037880117772,9.01605216934572,9.22314146454461,7.03738584640755,8.75408476981064,10.5280607044325,10.7858329038507,8.42938394511308,8.76221602319216,3.22435431620239,5.9409226557059,4.50830942692322,6.92414514674068,7.5641469995374,6.0316805105674,8.72664212314751,8.26616828685772,10.5189147653721,9.00799296629144,6.81841042300442,4.33797274861845,3.93117990226406,4.49724224769707,5.68008339887808,6.75296047306767,5.34714288740982,6.32931502391783,4.37765112292595,6.31491250332587,4.31304619582064,10.0478055870496,11.2333562321242,8.84026072814891,10.0462551572271,8.68398338454061,9.97667226899665,3.7898282354097,5.37784422258685,4.07388205860452,7.74477819352057,8.20780661464897,11.4260947625287,11.3177515757523,7.25121662888479,5.97954662051692,11.0023790373666,8.35702905050264,8.28887912956299,6.65385669474953,16.5870412333199,24.4757557718419,2.95058563811422,4.41498794087572,4.97706828962155,4.68846746368813,3.11476396215683,2.52470927204373,3.47059041357882,3.51394869866975,5.17016154558717,6.93009514062401,6.90675889655422,9.6246020468203,9.31064613852257,6.13737301613755,8.69633111482352,1.92792789853084,9.65192579416227,5.69809931735217,8.1443479676788,7.25868541079156,5.30980553359851,4.37005145078967,4.53485335447127,5.28094223316515,3.2483208216885,6.14870295887855,6.46070732920553,9.08834323693764,4.9909632973861,4.10847785316561,1.05418608574999,3.09406629744561,10.2131881726136,2.70091641046965,5.82114077022395,4.71541477069503,4.78818630834139,5.17269571046005,5.59466670047211,8.22055362609418,6.8054795338476,8.68511490541663,6.17479514553893,4.61681508236144,2.9063596805263,2.83470747162333,2.98430860007841,4.43180429311665,9.61886760878507,4.45020724825223,8.03093139749908,8.46186158649212,7.03739204004904,6.2161590811548,9.43190171275074,7.0921233694022,0.849892149969277,1.53946597556024,1.93479963326193,2.86401185404534,3.63786392618306,5.28630614529807,4.64422965533745,4.39085421630384,5.02233896616208,6.06889558731693,7.43881101528023,4.71160695571253,10.2395828900516,6.21339313086926,3.94585057078933,8.07389348637486,11.913011312911,12.6393272423631,10.4619457016962,7.94093789806657,9.50593633030607,10.0257376329842,12.0588246089567,6.03960302065015,6.33666013767304,2.8441000856536,3.44632865993279,3.59488350076895,2.98817892848929,2.32734704367726,3.57626438606277,2.76449533895928,3.54454865218985,2.42319479875554,3.12447907285499,2.52065462842101,3.50848370663109,3.65604998233252,3.97381467417334,3.62768613784338,6.65957860122194,4.21655126064536,4.86865387455827,9.07991091951295,6.94425159169373,6.22715522508701,3.42989406526505,6.01886524842436,2.25900737046827,1.84130094602871,1.14579102687879,2.57779773515531,4.11049511862385,1.5107877947794,2.70009000092722,4.5032120322422,2.26571204492102,4.14208249401456,5.18936737920883,7.98049746802062,4.60980735536162,4.37592090722929,2.93458427679175,3.8607136774503,4.00044110042907,5.76898160268904,2.56735367673452,4.04315538822076,5.32306529769503,3.58390048633545,4.49479235855436,3.71345883948242,4.99688579913835,1.90517476513229,4.05595140806994,4.43691207066522,5.35711671044299,4.71036544430071,4.4573002810104,4.61437096014278,5.24559617884106,5.23247099876383,4.32903149910521,4.06150117880047,4.75612729469209,2.63069711437843,3.39510284614654,5.05028044491965,4.38949567059444,4.13718825977367,3.27384834535751,4.49316839439301,5.5942917184531,3.99696924700713,5.14649538579898,4.08255002691767,4.97349663378993,5.29419405886837,4.40548887678801|short_description=p1@Casp9}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12371
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000138359_5end
|cluster_id=chr4:141349733..141349763,+
|description=CAGE_peak_1_at_Casp9_5end
|id=chr4:141349733..141349763,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004923!7.07e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.46e-08,31;UBERON:0004923,7.07e-07,24
|phase1_expression=3.52327463630547,16.40184415905,17.2899710968024,26.616850595001,34.0609096363516,12.255186849568,9.34450562382103,3.74457637980571,0.422366166455,0.234064526321993,0.856089841127525,0.8774937489487,3.25281386869291,5.59490575481583,4.99664642723494,7.89653542820321,7.69518065940961,13.249410945046,12.614527891728,12.3072999021429,8.75945888556019,8.43973085207525,8.61959304158487,13.2793710918528,11.9292826154928,17.2269589234506,8.61523992318149,11.4199753323521,11.9714754257516,8.82105454159758,8.64748991555688,12.065582795733,20.2971379902908,0,8.66554859253824,4.65457007003779,5.10423390655923,20.0895182753716,21.0960543021426,14.1351410872926,25.2939539853336,24.589637458504,16.0218416500281,4.65818226509636,5.27160042341476,5.68994931701213,15.6478268869608,7.19483016055474,10.1055644057857,7.58276606389705,10.7789544651529,4.31257693094915,4.02678254538567,2.17608642603403,3.02484419228218,9.51859913333004,12.6074713573053,13.9231464914909,3.43937983461316,4.23192783417626,6.97214543856797,7.79342423759004,8.00365316500025,31.0465402462083,24.7216590641744,26.2877642530057,13.7816050838466,13.831858991576,4.25127410464758,4.72520784160917,3.57552434297349,6.85562362569129,5.96345060569357,3.67472397644862,2.58782771749238,3.67687514644008,11.0115880999389,3.83062014255563,4.45458946443106,4.87979264601717,4.39140689291566,4.16730696445408,6.42120897703176,5.06486349028512,6.1119299110724,4.12480019663135,2.98980529678116,3.35519002485541,6.28527404665428,7.85944225110569,12.7540375028738,10.3250865237766,4.0798280022465,16.7307989407723,8.4470934268197,9.40856462904405,7.8648875273781,15.3387290320252,11.1707981979234,12.7202246823722,4.92951969218382,25.6652954828636,20.3844191765317,14.2213340630666,7.14420435337007,6.33399663687746,5.05524445014783,10.0481814152773,8.54495016035667,8.31275978763019,6.59244241711316,7.30717147949139,6.91846491768175,6.33035090321015,8.34879820663504,7.41432888845085,8.89901883843746,5.49477556295664,9.73071607144862,4.36770494858005,4.41683036920787,5.81850303762267,7.45567044872489,5.5628351432194,6.70229461803056,10.2182822083437,1.55759661857696,0.599902730993408,3.43089613097275,3.59497534571574,1.37250180845588,1.88481528169297,2.08589184230732,2.30143911597297,4.1557608911912,2.59586020908412,4.78645010096487,9.33052279575698,9.35074206204597,13.4682787767343,4.55421550369463,8.96618207290544,3.96136685571768,6.93242162044289,7.27990540919208,5.12454881139399,7.68354141389776,11.1242449417777,4.95806383745537,3.40390944302075,2.63926686245923,3.28793598641362,2.78047249225598,4.179025998266,3.2925141825271,7.16523360546575,6.31991868581911,4.63226232806487,3.40996199274711,5.59239585845855,5.62862543954631,5.22179978236943,4.26140524053378,5.50939848892731,4.9365476123961,3.48800917125612,5.633741429392,5.7215017759913,7.07607354627966,4.59668899421467,6.24229833503089,6.28659945928929,6.80605357402257,8.58921080066379,2.10289948564127,2.26390147234426,14.5384264512871,13.2225283331772,6.61193576659225,5.34144345279009,5.92790322081629,6.25218926332362,8.45036566610507,8.75037880117772,9.01605216934572,9.22314146454461,7.03738584640755,8.75408476981064,10.5280607044325,10.7858329038507,8.42938394511308,8.76221602319216,3.22435431620239,5.9409226557059,4.50830942692322,6.92414514674068,7.5641469995374,6.0316805105674,8.72664212314751,8.26616828685772,10.5189147653721,9.00799296629144,6.81841042300442,4.33797274861845,3.93117990226406,4.49724224769707,5.68008339887808,6.75296047306767,5.34714288740982,6.32931502391783,4.37765112292595,6.31491250332587,4.31304619582064,10.0478055870496,11.2333562321242,8.84026072814891,10.0462551572271,8.68398338454061,9.97667226899665,3.7898282354097,5.37784422258685,4.07388205860452,7.74477819352057,8.20780661464897,11.4260947625287,11.3177515757523,7.25121662888479,5.97954662051692,11.0023790373666,8.35702905050264,8.28887912956299,6.65385669474953,16.5870412333199,24.4757557718419,2.95058563811422,4.41498794087572,4.97706828962155,4.68846746368813,3.11476396215683,2.52470927204373,3.47059041357882,3.51394869866975,5.17016154558717,6.93009514062401,6.90675889655422,9.6246020468203,9.31064613852257,6.13737301613755,8.69633111482352,1.92792789853084,9.65192579416227,5.69809931735217,8.1443479676788,7.25868541079156,5.30980553359851,4.37005145078967,4.53485335447127,5.28094223316515,3.2483208216885,6.14870295887855,6.46070732920553,9.08834323693764,4.9909632973861,4.10847785316561,1.05418608574999,3.09406629744561,10.2131881726136,2.70091641046965,5.82114077022395,4.71541477069503,4.78818630834139,5.17269571046005,5.59466670047211,8.22055362609418,6.8054795338476,8.68511490541663,6.17479514553893,4.61681508236144,2.9063596805263,2.83470747162333,2.98430860007841,4.43180429311665,9.61886760878507,4.45020724825223,8.03093139749908,8.46186158649212,7.03739204004904,6.2161590811548,9.43190171275074,7.0921233694022,0.849892149969277,1.53946597556024,1.93479963326193,2.86401185404534,3.63786392618306,5.28630614529807,4.64422965533745,4.39085421630384,5.02233896616208,6.06889558731693,7.43881101528023,4.71160695571253,10.2395828900516,6.21339313086926,3.94585057078933,8.07389348637486,11.913011312911,12.6393272423631,10.4619457016962,7.94093789806657,9.50593633030607,10.0257376329842,12.0588246089567,6.03960302065015,6.33666013767304,2.8441000856536,3.44632865993279,3.59488350076895,2.98817892848929,2.32734704367726,3.57626438606277,2.76449533895928,3.54454865218985,2.42319479875554,3.12447907285499,2.52065462842101,3.50848370663109,3.65604998233252,3.97381467417334,3.62768613784338,6.65957860122194,4.21655126064536,4.86865387455827,9.07991091951295,6.94425159169373,6.22715522508701,3.42989406526505,6.01886524842436,2.25900737046827,1.84130094602871,1.14579102687879,2.57779773515531,4.11049511862385,1.5107877947794,2.70009000092722,4.5032120322422,2.26571204492102,4.14208249401456,5.18936737920883,7.98049746802062,4.60980735536162,4.37592090722929,2.93458427679175,3.8607136774503,4.00044110042907,5.76898160268904,2.56735367673452,4.04315538822076,5.32306529769503,3.58390048633545,4.49479235855436,3.71345883948242,4.99688579913835,1.90517476513229,4.05595140806994,4.43691207066522,5.35711671044299,4.71036544430071,4.4573002810104,4.61437096014278,5.24559617884106,5.23247099876383,4.32903149910521,4.06150117880047,4.75612729469209,2.63069711437843,3.39510284614654,5.05028044491965,4.38949567059444,4.13718825977367,3.27384834535751,4.49316839439301,5.5942917184531,3.99696924700713,5.14649538579898,4.08255002691767,4.97349663378993,5.29419405886837,4.40548887678801
|short_description=p1@Casp9
}}

Latest revision as of 15:44, 26 September 2015

Short description:p1@Casp9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Casp9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000138359_5end
EntrezGene:Casp9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Casp9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.29
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.62
CD326+ enterocyte, pool2.CNhs13197.11849-124I434.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.90
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.62
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.93
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G925.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C731.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C813.78
Mouse Microglia, donor2.CNhs12634.11736-123E813.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.36
Mouse Schwann, donor1.CNhs12507.11728-123D96.29
Mouse Schwann, donor2.CNhs12573.11746-123F97.86
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H125.67
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.05
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D67.31
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F56.33
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I37.41
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H15.49
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G413.47
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E28.97
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C67.28
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C85.51
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I27.08
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G16.24
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D28.59
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I314.54
intestine, adult.CNhs10496.178-9A313.22
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D85.93
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A510.53
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G18.76
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G76.03
kidney, neonate N10.CNhs11206.758-6D58.73
kidney, neonate N20.CNhs11113.832-19I18.27
kidney, neonate N25.CNhs11122.1353-25F310.52
kidney, neonate N30.CNhs11203.1385-42H19.01
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H110.05
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B19.98
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I611.43
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E57.25
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E611.00
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A124.48
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D79.09
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C75.82
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G38.69
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.83
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I19.62
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H19.43
spleen, neonate N25.CNhs11099.1354-25G37.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C511.91
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I510.46
testis, embryo E18.CNhs11027.503-18G57.94
testis, neonate N00.CNhs11189.1300-22B79.51
testis, neonate N07.CNhs11222.726-26I410.03
testis, neonate N10.CNhs11204.763-44D912.06
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.97
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I85.19
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine5.46e-0831
organ component layer7.07e-0724
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:141349733..141349763,%2B&oldid=4261328"