FFCP PHASE1:Mm9::chr4:141302645..141302674,+: Difference between revisions
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{{FFCP|EntrezGene=75986|HGNC=|MCL_coexpression_id=8|UniProt=A2AS89|association_with_transcript=55bp_to_NM_001081408,uc008vpe.1_5end|description=CAGE_peak_3_at_Agmat_5end|id=chr4:141302645..141302674,+|ontology_enrichment_celltype=CL:0002563!1.27e-07!9;CL:0002251!1.27e-07!9;CL:0000066!6.66e-07!25|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-09,9;CL:0002251,1.05e-09,9;CL:0000066,3.73e-09,25;CL:0000223,4.35e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.62e-18!22;UBERON:0007499!2.62e-18!22;UBERON:0006925!2.62e-18!22;UBERON:0009497!2.62e-18!22;UBERON:0000015!2.62e-18!22;UBERON:0002423!2.62e-18!22;UBERON:0006235!2.62e-18!22;UBERON:0008835!2.62e-18!22;UBERON:0003894!2.62e-18!22;UBERON:0004161!2.62e-18!22;UBERON:0008836!2.62e-18!22;UBERON:0009854!4.47e-17!23;UBERON:0009856!4.47e-17!23;UBERON:0002365!6.31e-15!25;UBERON:0002330!6.31e-15!25;UBERON:0000160!1.51e-13!43;UBERON:0005409!2.80e-11!59;UBERON:0000344!3.33e-11!15;UBERON:0001007!1.04e-10!128;UBERON:0001555!1.04e-10!128;UBERON:0007026!1.04e-10!128;UBERON:0005172!1.46e-10!49;UBERON:0005173!1.46e-10!49;UBERON:0002417!1.46e-10!49;UBERON:0000916!1.46e-10!49;UBERON:0004119!3.22e-10!130;UBERON:0000925!3.22e-10!130;UBERON:0006595!3.22e-10!130;UBERON:0001242!7.01e-10!13;UBERON:0000060!7.01e-10!13;UBERON:0001262!7.01e-10!13;UBERON:0004786!7.01e-10!13;UBERON:0004921!8.68e-10!126;UBERON:0004185!8.68e-10!126;UBERON:0003929!1.87e-08!55;UBERON:0003350!1.27e-07!9;UBERON:0004808!1.27e-07!9;UBERON:0001277!1.27e-07!9;UBERON:0005256!3.70e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.33e-23,31;UBERON:0002107,1.27e-22,22;UBERON:0007499,1.27e-22,22;UBERON:0006925,1.27e-22,22;UBERON:0009497,1.27e-22,22;UBERON:0000015,1.27e-22,22;UBERON:0002423,1.27e-22,22;UBERON:0006235,1.27e-22,22;UBERON:0008835,1.27e-22,22;UBERON:0003894,1.27e-22,22;UBERON:0004161,1.27e-22,22;UBERON:0008836,1.27e-22,22;UBERON:0009854,2.66e-21,23;UBERON:0009856,2.66e-21,23;UBERON:0002365,5.51e-19,25;UBERON:0002330,5.51e-19,25;UBERON:0001007,3.44e-16,116;UBERON:0001555,3.44e-16,116;UBERON:0007026,3.44e-16,116;UBERON:0004119,1.22e-15,118;UBERON:0000925,1.22e-15,118;UBERON:0006595,1.22e-15,118;UBERON:0004921,7.76e-15,114;UBERON:0000344,1.66e-14,15;UBERON:0005409,2.10e-14,47;UBERON:0003929,3.61e-13,55;UBERON:0001242,9.92e-13,13;UBERON:0001262,9.92e-13,13;UBERON:0004786,9.92e-13,13;UBERON:0003350,1.05e-09,9;UBERON:0004808,1.05e-09,9;UBERON:0001277,1.05e-09,9;UBERON:0000490,2.15e-09,66;UBERON:0005911,1.36e-08,69;UBERON:0005256,3.71e-08,45;UBERON:0000485,1.63e-07,11;UBERON:0004923,2.05e-07,24;UBERON:0005172,5.79e-07,49;UBERON:0005173,5.79e-07,49;UBERON:0002417,5.79e-07,49;UBERON:0000916,5.79e-07,49;UBERON:0003914,7.02e-07,47|phase1_expression=0,4.18770489167233,5.45999087267443,5.74682001482977,9.01612313903425,7.55456723603504,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.91971964335605,6.8822784320151,4.59385571292016,7.75371593086335,5.817723282519,4.18051522804023,5.29263272495855,4.8780712344167,0,0,0,9.82095507154334,16.2909952451323,9.59595974433135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,41.3003460951065,84.3164453797611,84.1936978954995,46.1341256387845,40.7704467258575,16.5724415755467,0,0,0,0,0,0,0,0,0,0,18.4977885144877,0,0.593768556259299,1.04091196059682,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,19.3048913664387,0,0.464473343720877,2.96395161040815,11.6976444281539,12.4531704553127,11.9842144450912,5.21981967698963,20.2579714310533,14.8287773192159,14.1259095149217,9.16331209459865,4.49409704327111,3.6743468478698,2.58883655230677,0,0.685491075658373,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.295220295959204,0.31399745568275,0.493588655687202,53.6579255027739,1.50160595144485,3.14494392181125,4.04751802292737,3.04290182082754,6.51178331331525,10.1850340712568,11.7955416354832,24.3202840162553,31.0254396902532,37.3797336971122,54.70471930727,50.5501030445588,52.031248857105,35.3412904638167,43.9023604440664,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,5.94385074286909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,1.18805874903981,0.836353184057875,0.87345025498471,0.809186078308924,3.88471241909079,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.682934423016537,0.972426868273176,1.67690530102386,1.83843508450014,0.888986911206461,2.47242068686673,1.60459604795908,1.01078884705519,2.02783439912192,1.50901073108861,1.12369808963859,1.21647789569252,1.55075766180156,0.952587382566147,1.0429589335037,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,1.95223386775271,1.43061713968393,1.59881058295561,1.03520318456864,1.26921911837515,0.548783918618318,1.8414879800649,0.814824683075171,1.12228454331548,2.37270036248348,1.47756723563345,2.86461730218783,1.85924209423159,0.578719832943424,0,1.63752125911786,2.57845264857958,0,0,0.231867835620421|short_description=p3@Agmat}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75986 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=A2AS89 | |||
|association_with_transcript=55bp_to_NM_001081408,uc008vpe.1_5end | |||
|cluster_id=chr4:141302645..141302674,+ | |||
|description=CAGE_peak_3_at_Agmat_5end | |||
|id=chr4:141302645..141302674,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.27e-07!9;CL:0002251!1.27e-07!9;CL:0000066!6.66e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.05e-09,9;CL:0002251,1.05e-09,9;CL:0000066,3.73e-09,25;CL:0000223,4.35e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.62e-18!22;UBERON:0007499!2.62e-18!22;UBERON:0006925!2.62e-18!22;UBERON:0009497!2.62e-18!22;UBERON:0000015!2.62e-18!22;UBERON:0002423!2.62e-18!22;UBERON:0006235!2.62e-18!22;UBERON:0008835!2.62e-18!22;UBERON:0003894!2.62e-18!22;UBERON:0004161!2.62e-18!22;UBERON:0008836!2.62e-18!22;UBERON:0009854!4.47e-17!23;UBERON:0009856!4.47e-17!23;UBERON:0002365!6.31e-15!25;UBERON:0002330!6.31e-15!25;UBERON:0000160!1.51e-13!43;UBERON:0005409!2.80e-11!59;UBERON:0000344!3.33e-11!15;UBERON:0001007!1.04e-10!128;UBERON:0001555!1.04e-10!128;UBERON:0007026!1.04e-10!128;UBERON:0005172!1.46e-10!49;UBERON:0005173!1.46e-10!49;UBERON:0002417!1.46e-10!49;UBERON:0000916!1.46e-10!49;UBERON:0004119!3.22e-10!130;UBERON:0000925!3.22e-10!130;UBERON:0006595!3.22e-10!130;UBERON:0001242!7.01e-10!13;UBERON:0000060!7.01e-10!13;UBERON:0001262!7.01e-10!13;UBERON:0004786!7.01e-10!13;UBERON:0004921!8.68e-10!126;UBERON:0004185!8.68e-10!126;UBERON:0003929!1.87e-08!55;UBERON:0003350!1.27e-07!9;UBERON:0004808!1.27e-07!9;UBERON:0001277!1.27e-07!9;UBERON:0005256!3.70e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.33e-23,31;UBERON:0002107,1.27e-22,22;UBERON:0007499,1.27e-22,22;UBERON:0006925,1.27e-22,22;UBERON:0009497,1.27e-22,22;UBERON:0000015,1.27e-22,22;UBERON:0002423,1.27e-22,22;UBERON:0006235,1.27e-22,22;UBERON:0008835,1.27e-22,22;UBERON:0003894,1.27e-22,22;UBERON:0004161,1.27e-22,22;UBERON:0008836,1.27e-22,22;UBERON:0009854,2.66e-21,23;UBERON:0009856,2.66e-21,23;UBERON:0002365,5.51e-19,25;UBERON:0002330,5.51e-19,25;UBERON:0001007,3.44e-16,116;UBERON:0001555,3.44e-16,116;UBERON:0007026,3.44e-16,116;UBERON:0004119,1.22e-15,118;UBERON:0000925,1.22e-15,118;UBERON:0006595,1.22e-15,118;UBERON:0004921,7.76e-15,114;UBERON:0000344,1.66e-14,15;UBERON:0005409,2.10e-14,47;UBERON:0003929,3.61e-13,55;UBERON:0001242,9.92e-13,13;UBERON:0001262,9.92e-13,13;UBERON:0004786,9.92e-13,13;UBERON:0003350,1.05e-09,9;UBERON:0004808,1.05e-09,9;UBERON:0001277,1.05e-09,9;UBERON:0000490,2.15e-09,66;UBERON:0005911,1.36e-08,69;UBERON:0005256,3.71e-08,45;UBERON:0000485,1.63e-07,11;UBERON:0004923,2.05e-07,24;UBERON:0005172,5.79e-07,49;UBERON:0005173,5.79e-07,49;UBERON:0002417,5.79e-07,49;UBERON:0000916,5.79e-07,49;UBERON:0003914,7.02e-07,47 | |||
|phase1_expression=0,4.18770489167233,5.45999087267443,5.74682001482977,9.01612313903425,7.55456723603504,8.1764424208434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,5.91971964335605,6.8822784320151,4.59385571292016,7.75371593086335,5.817723282519,4.18051522804023,5.29263272495855,4.8780712344167,0,0,0,9.82095507154334,16.2909952451323,9.59595974433135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,41.3003460951065,84.3164453797611,84.1936978954995,46.1341256387845,40.7704467258575,16.5724415755467,0,0,0,0,0,0,0,0,0,0,18.4977885144877,0,0.593768556259299,1.04091196059682,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,19.3048913664387,0,0.464473343720877,2.96395161040815,11.6976444281539,12.4531704553127,11.9842144450912,5.21981967698963,20.2579714310533,14.8287773192159,14.1259095149217,9.16331209459865,4.49409704327111,3.6743468478698,2.58883655230677,0,0.685491075658373,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.295220295959204,0.31399745568275,0.493588655687202,53.6579255027739,1.50160595144485,3.14494392181125,4.04751802292737,3.04290182082754,6.51178331331525,10.1850340712568,11.7955416354832,24.3202840162553,31.0254396902532,37.3797336971122,54.70471930727,50.5501030445588,52.031248857105,35.3412904638167,43.9023604440664,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0.485561272309963,0.604647113929502,0.188605079755898,0,0,5.94385074286909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,8.74442509889552,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,1.18805874903981,0.836353184057875,0.87345025498471,0.809186078308924,3.88471241909079,0,0,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.682934423016537,0.972426868273176,1.67690530102386,1.83843508450014,0.888986911206461,2.47242068686673,1.60459604795908,1.01078884705519,2.02783439912192,1.50901073108861,1.12369808963859,1.21647789569252,1.55075766180156,0.952587382566147,1.0429589335037,1.73618298417335,1.23625770240992,1.17759136107518,0.342869252385415,1.95223386775271,1.43061713968393,1.59881058295561,1.03520318456864,1.26921911837515,0.548783918618318,1.8414879800649,0.814824683075171,1.12228454331548,2.37270036248348,1.47756723563345,2.86461730218783,1.85924209423159,0.578719832943424,0,1.63752125911786,2.57845264857958,0,0,0.231867835620421 | |||
|short_description=p3@Agmat | |||
}} |
Latest revision as of 15:42, 26 September 2015
Short description: | p3@Agmat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Agmat_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 55bp_to_NM_001081408, uc008vpe.1_5end |
EntrezGene: | Agmat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.05e-09 | 9 |
epithelial cell of alimentary canal | 1.05e-09 | 9 |
epithelial cell | 3.73e-09 | 25 |
endodermal cell | 4.35e-08 | 20 |