Personal tools

FFCP PHASE1:Mm9::chr12:4914344..4914364,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr12:4914344..4914364,- |short_description=p2@Ubxn2a |description=CAGE_peak_2_at_Ubxn2a_5end |association_with_transcript=-18bp_to_NM_145441,uc007myr.1,uc007my...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:4914344..4914364,-
|DHSsupport=NA
|short_description=p2@Ubxn2a
|DPIdataset=NA
|description=CAGE_peak_2_at_Ubxn2a_5end
|association_with_transcript=-18bp_to_NM_145441,uc007myr.1,uc007mys.1_5end
|EntrezGene=217379
|EntrezGene=217379
|HGNC=
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=B8JK44,Q99KJ0
|UniProt=B8JK44,Q99KJ0
|association_with_transcript=-18bp_to_NM_145441,uc007myr.1,uc007mys.1_5end
|cluster_id=chr12:4914344..4914364,-
|description=CAGE_peak_2_at_Ubxn2a_5end
|id=chr12:4914344..4914364,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!9.90e-11!51;UBERON:0000344!2.78e-08!15;UBERON:0004119!1.04e-07!130;UBERON:0000925!1.04e-07!130;UBERON:0006595!1.04e-07!130;UBERON:0001007!1.66e-07!128;UBERON:0001555!1.66e-07!128;UBERON:0007026!1.66e-07!128;UBERON:0004923!2.04e-07!24;UBERON:0001242!3.45e-07!13;UBERON:0000060!3.45e-07!13;UBERON:0001262!3.45e-07!13;UBERON:0004786!3.45e-07!13;UBERON:0004921!8.06e-07!126;UBERON:0004185!8.06e-07!126
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.53e-11,51;UBERON:0000344,2.75e-08,15;UBERON:0004119,1.95e-07,118;UBERON:0000925,1.95e-07,118;UBERON:0006595,1.95e-07,118;UBERON:0004923,2.24e-07,24;UBERON:0000160,2.51e-07,31;UBERON:0001007,3.05e-07,116;UBERON:0001555,3.05e-07,116;UBERON:0007026,3.05e-07,116;UBERON:0001242,3.42e-07,13;UBERON:0001262,3.42e-07,13;UBERON:0004786,3.42e-07,13
|phase1_expression=2.7225304007815,59.6747947063307,74.1648760204944,43.8573106394904,66.6191320828642,22.6637017081051,17.0537227634734,5.03580961422147,7.88416844049334,5.38348410540585,12.3276937122364,12.6040011212632,3.59521532855532,3.58423649917889,7.66152452176024,9.11138703254217,9.79386629379405,2.20823515750766,3.70208970735495,2.54633791078818,5.01755411891312,1.58865521921416,0.261199789138935,12.3194165550923,15.1410125504332,55.1262685550419,42.2146756235893,29.3040876452809,18.6222951067246,22.1786514188739,10.6430645114546,5.08024538767705,3.69038872550742,0,5.48818077527422,4.15586613396231,4.69589519403449,4.18531630736908,3.906676722619,0,4.70585190424811,4.09827290975067,3.88408282424923,2.39203954153597,2.53442328048786,2.0190142737785,0.782391344348039,0.872100625521786,1.09843091367236,2.3331587888914,0.979904951377538,2.87505128729943,5.20126078778983,5.07753499407941,5.37750078627942,1.28629718017973,2.0057340795713,4.12537673821954,3.03474691289397,0.528990979272033,2.53532561402472,1.0165335962074,0,0,0.988866362566974,0,1.49800055259202,0.384218305321555,2.69592992002042,2.97013064329719,2.3135745748652,4.28476476605705,4.8591079009355,1.71487118900936,0.862609239164127,1.83843757322004,9.91042928994498,12.7687338085188,13.0565553267807,1.58263545276233,1.73826522844578,2.08365348222704,12.0048689570594,4.50210088025344,8.09830713217094,4.41942878210502,5.26775218956681,5.21918448310842,1.96888102666279,1.96486056277642,5.50742528533188,6.88339101585109,4.75979933595425,3.77792234146472,4.54843492213368,4.03224198387602,8.00533194750986,1.70430322578058,2.85764605063156,1.7666978725517,3.94361575374705,1.28326477414318,10.1922095882658,14.2213340630666,4.76280290224671,3.80039798212648,2.02209778005913,9.1347103775248,3.10725460376606,5.64080128446334,1.21439728736295,0.608930956624282,2.07553947530453,2.11011696773672,3.41007250693544,4.90099706185734,8.89901883843746,7.80836527367523,3.5384422077995,4.52947179852746,8.61281921995535,5.81850303762267,1.86391761218122,9.9545470983926,12.9856958224342,15.0719662573069,4.07371423320129,1.79970819298022,3.93917703926501,10.6351353977424,5.03250663100489,6.78533501409468,7.47444576826789,6.64860189058859,9.97382613885888,7.46309810111685,2.95334155165917,6.84238338355512,6.82351447770922,9.6803253707778,1.30120442962704,1.14951052216736,0.900310649026746,2.41127708537144,2.78949646520444,2.0498195245576,3.46696380870997,7.50239775143145,0.431135985865684,1.70195472151037,1.40760899331159,1.31517439456545,1.94633074457919,2.78601733217733,1.85203922767149,0.995171334092466,2.1066395619397,0.772043721344145,2.27330799516474,2.07125772535502,1.17263029990548,1.2604344302271,2.13070262026689,2.36117078096885,3.39387648352232,2.32533944750408,2.41446061259657,5.02090972178829,4.93679549740441,7.22336841948019,12.8899407177911,13.1579988682799,10.9775057645525,12.2127841071938,5.25724871410318,3.80747065803352,35.0243909962826,11.1069237998689,0.853153002140936,1.16118335930219,1.28867461322093,1.61346819698674,3.11329261382818,5.70676878337677,13.7613427847908,7.74085087202851,8.79673230800943,6.36660710531683,7.99352757188393,10.7858329038507,17.2910439899755,23.299528970761,0.758671603812327,1.5994791765362,2.25415471346161,1.83286195060783,2.13347735884388,3.43665517462561,5.69128834118316,6.34723636312289,8.47793130343424,8.76119863844784,5.63259991465583,3.50374722003798,4.12773889737726,5.62155280962134,3.44862206360455,2.894125917029,4.32863948028414,4.31544206176216,9.07957269940198,4.66754402419738,2.87536413054709,3.34926852901653,7.48890415474945,5.55673531483646,6.09951205974501,6.75420929908714,7.39012760666419,0.757965647081939,1.46668478797823,1.35796068620151,1.40814148973101,2.1775813467436,1.42826184531608,5.65887578787617,3.4679731703362,4.4292937929755,5.42146213435456,5.89907932976657,7.08008425650172,7.5217510462386,1.50791283939272,0.54390568381871,9.83528546038072,6.62248191131358,10.7568895291821,12.0728037189969,2.78689407140348,19.4402613947367,1.26203287766503,0.390438744296638,1.07711698866399,1.19484398976276,0.668396022247182,1.13230612315533,1.61924280669958,1.75353514746787,0.790575555893047,5.46246237917072,2.41298144854057,1.24645922567079,4.0721739838394,2.96946221350564,13.2745138339963,0.485561272309963,0.604647113929502,2.45186603682668,2.06711325016541,3.68922177532713,7.23599220871019,6.5436071305951,5.34746067577082,6.95280867458795,4.21674434299995,17.5330423521918,8.5109901438447,1.08036656418786,0.646793418913773,0.428674070063185,2.12808280370728,0.535106452806212,1.48094118541909,1.8267896946876,3.75474732901937,6.99045833850607,5.95426674748397,7.74965388824956,4.52100394748536,5.54878909339034,5.252383136138,5.58079059133208,12.2421951384537,17.2445530869774,3.75915937755276,0.82554747185289,2.77791791054568,6.96963290917357,8.74843057414561,6.17701067657611,5.26933132980952,7.55737842547753,6.63359874261234,7.63736494412091,1.58167996790568,1.42323626988794,2.48412283890143,1.67270636811575,2.40198820120795,4.04593039154462,6.69492991375221,8.89970202745701,11.7949625695532,13.6694648879124,0.56369293868419,1.94371509857172,0.66183396182839,1.36115831840833,0.774958940866387,2.02747350588934,2.69921648885234,2.3436789271911,2.09718688851422,1.69108884578204,4.60848010012585,2.8441000856536,0,1.43795340030758,2.5984164595559,3.22248052201467,2.18549490259391,3.60586348559907,3.10148007066612,3.02899349844443,4.80102881926499,3.42809029465258,3.41102582589133,3.94468550725351,4.20756847853648,8.84248496099324,3.7737612073591,2.15313255862742,4.02923079273788,6.95482538515886,5.81815673898664,3.11357761254351,5.78794623513478,5.517293144389,3.3885110557024,8.28585425712918,7.44764167471216,7.38968684077857,4.7955776383945,4.5323633843382,2.02506750069542,8.10578165803597,5.89085131679466,5.69536342927002,1.55681021376265,0.798049746802062,1.87806966329548,1.70174701947806,2.09613162627982,2.75765262675021,3.33370091702423,2.47242068686673,2.24643446714271,1.26348605881899,2.02783439912192,2.45214243801899,3.46473577638565,3.52138338226781,3.50356360629241,5.23923060411381,4.51948871184936,5.59436739344745,2.88460130562315,2.64958056241915,2.40008476669791,3.90446773550542,2.38436189947321,2.61623549938191,3.01150017329058,3.46919892355874,2.37806364734604,4.20911538300549,4.34573164306758,2.24456908663095,3.79632057997357,3.25064791839359,3.27384834535751,3.25367366490529,1.92906610981141,1.74867404556562,3.27504251823572,3.86767897286937,4.59091996965224,5.7353768971074,6.26043156175138
|phase1_expression=2.7225304007815,59.6747947063307,74.1648760204944,43.8573106394904,66.6191320828642,22.6637017081051,17.0537227634734,5.03580961422147,7.88416844049334,5.38348410540585,12.3276937122364,12.6040011212632,3.59521532855532,3.58423649917889,7.66152452176024,9.11138703254217,9.79386629379405,2.20823515750766,3.70208970735495,2.54633791078818,5.01755411891312,1.58865521921416,0.261199789138935,12.3194165550923,15.1410125504332,55.1262685550419,42.2146756235893,29.3040876452809,18.6222951067246,22.1786514188739,10.6430645114546,5.08024538767705,3.69038872550742,0,5.48818077527422,4.15586613396231,4.69589519403449,4.18531630736908,3.906676722619,0,4.70585190424811,4.09827290975067,3.88408282424923,2.39203954153597,2.53442328048786,2.0190142737785,0.782391344348039,0.872100625521786,1.09843091367236,2.3331587888914,0.979904951377538,2.87505128729943,5.20126078778983,5.07753499407941,5.37750078627942,1.28629718017973,2.0057340795713,4.12537673821954,3.03474691289397,0.528990979272033,2.53532561402472,1.0165335962074,0,0,0.988866362566974,0,1.49800055259202,0.384218305321555,2.69592992002042,2.97013064329719,2.3135745748652,4.28476476605705,4.8591079009355,1.71487118900936,0.862609239164127,1.83843757322004,9.91042928994498,12.7687338085188,13.0565553267807,1.58263545276233,1.73826522844578,2.08365348222704,12.0048689570594,4.50210088025344,8.09830713217094,4.41942878210502,5.26775218956681,5.21918448310842,1.96888102666279,1.96486056277642,5.50742528533188,6.88339101585109,4.75979933595425,3.77792234146472,4.54843492213368,4.03224198387602,8.00533194750986,1.70430322578058,2.85764605063156,1.7666978725517,3.94361575374705,1.28326477414318,10.1922095882658,14.2213340630666,4.76280290224671,3.80039798212648,2.02209778005913,9.1347103775248,3.10725460376606,5.64080128446334,1.21439728736295,0.608930956624282,2.07553947530453,2.11011696773672,3.41007250693544,4.90099706185734,8.89901883843746,7.80836527367523,3.5384422077995,4.52947179852746,8.61281921995535,5.81850303762267,1.86391761218122,9.9545470983926,12.9856958224342,15.0719662573069,4.07371423320129,1.79970819298022,3.93917703926501,10.6351353977424,5.03250663100489,6.78533501409468,7.47444576826789,6.64860189058859,9.97382613885888,7.46309810111685,2.95334155165917,6.84238338355512,6.82351447770922,9.6803253707778,1.30120442962704,1.14951052216736,0.900310649026746,2.41127708537144,2.78949646520444,2.0498195245576,3.46696380870997,7.50239775143145,0.431135985865684,1.70195472151037,1.40760899331159,1.31517439456545,1.94633074457919,2.78601733217733,1.85203922767149,0.995171334092466,2.1066395619397,0.772043721344145,2.27330799516474,2.07125772535502,1.17263029990548,1.2604344302271,2.13070262026689,2.36117078096885,3.39387648352232,2.32533944750408,2.41446061259657,5.02090972178829,4.93679549740441,7.22336841948019,12.8899407177911,13.1579988682799,10.9775057645525,12.2127841071938,5.25724871410318,3.80747065803352,35.0243909962826,11.1069237998689,0.853153002140936,1.16118335930219,1.28867461322093,1.61346819698674,3.11329261382818,5.70676878337677,13.7613427847908,7.74085087202851,8.79673230800943,6.36660710531683,7.99352757188393,10.7858329038507,17.2910439899755,23.299528970761,0.758671603812327,1.5994791765362,2.25415471346161,1.83286195060783,2.13347735884388,3.43665517462561,5.69128834118316,6.34723636312289,8.47793130343424,8.76119863844784,5.63259991465583,3.50374722003798,4.12773889737726,5.62155280962134,3.44862206360455,2.894125917029,4.32863948028414,4.31544206176216,9.07957269940198,4.66754402419738,2.87536413054709,3.34926852901653,7.48890415474945,5.55673531483646,6.09951205974501,6.75420929908714,7.39012760666419,0.757965647081939,1.46668478797823,1.35796068620151,1.40814148973101,2.1775813467436,1.42826184531608,5.65887578787617,3.4679731703362,4.4292937929755,5.42146213435456,5.89907932976657,7.08008425650172,7.5217510462386,1.50791283939272,0.54390568381871,9.83528546038072,6.62248191131358,10.7568895291821,12.0728037189969,2.78689407140348,19.4402613947367,1.26203287766503,0.390438744296638,1.07711698866399,1.19484398976276,0.668396022247182,1.13230612315533,1.61924280669958,1.75353514746787,0.790575555893047,5.46246237917072,2.41298144854057,1.24645922567079,4.0721739838394,2.96946221350564,13.2745138339963,0.485561272309963,0.604647113929502,2.45186603682668,2.06711325016541,3.68922177532713,7.23599220871019,6.5436071305951,5.34746067577082,6.95280867458795,4.21674434299995,17.5330423521918,8.5109901438447,1.08036656418786,0.646793418913773,0.428674070063185,2.12808280370728,0.535106452806212,1.48094118541909,1.8267896946876,3.75474732901937,6.99045833850607,5.95426674748397,7.74965388824956,4.52100394748536,5.54878909339034,5.252383136138,5.58079059133208,12.2421951384537,17.2445530869774,3.75915937755276,0.82554747185289,2.77791791054568,6.96963290917357,8.74843057414561,6.17701067657611,5.26933132980952,7.55737842547753,6.63359874261234,7.63736494412091,1.58167996790568,1.42323626988794,2.48412283890143,1.67270636811575,2.40198820120795,4.04593039154462,6.69492991375221,8.89970202745701,11.7949625695532,13.6694648879124,0.56369293868419,1.94371509857172,0.66183396182839,1.36115831840833,0.774958940866387,2.02747350588934,2.69921648885234,2.3436789271911,2.09718688851422,1.69108884578204,4.60848010012585,2.8441000856536,0,1.43795340030758,2.5984164595559,3.22248052201467,2.18549490259391,3.60586348559907,3.10148007066612,3.02899349844443,4.80102881926499,3.42809029465258,3.41102582589133,3.94468550725351,4.20756847853648,8.84248496099324,3.7737612073591,2.15313255862742,4.02923079273788,6.95482538515886,5.81815673898664,3.11357761254351,5.78794623513478,5.517293144389,3.3885110557024,8.28585425712918,7.44764167471216,7.38968684077857,4.7955776383945,4.5323633843382,2.02506750069542,8.10578165803597,5.89085131679466,5.69536342927002,1.55681021376265,0.798049746802062,1.87806966329548,1.70174701947806,2.09613162627982,2.75765262675021,3.33370091702423,2.47242068686673,2.24643446714271,1.26348605881899,2.02783439912192,2.45214243801899,3.46473577638565,3.52138338226781,3.50356360629241,5.23923060411381,4.51948871184936,5.59436739344745,2.88460130562315,2.64958056241915,2.40008476669791,3.90446773550542,2.38436189947321,2.61623549938191,3.01150017329058,3.46919892355874,2.37806364734604,4.20911538300549,4.34573164306758,2.24456908663095,3.79632057997357,3.25064791839359,3.27384834535751,3.25367366490529,1.92906610981141,1.74867404556562,3.27504251823572,3.86767897286937,4.59091996965224,5.7353768971074,6.26043156175138
|short_description=p2@Ubxn2a
}}
}}

Latest revision as of 15:28, 26 September 2015

Short description:p2@Ubxn2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ubxn2a_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -18bp_to_NM_145441, uc007myr.1, uc007mys.1_5end
EntrezGene:Ubxn2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ubxn2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I559.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I674.16
CD326+ enterocyte, pool1.CNhs13542.11848-124I343.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I466.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.70
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.14
GP2+ M cell, pool1.CNhs13228.11845-124H955.13
GP2+ M cell, pool2.CNhs13231.11846-124I142.21
GP2+ M cell, pool3.CNhs13240.11847-124I229.30
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C122.18
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D75.64
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I212.99
colon, adult.CNhs10468.36-18H715.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.94
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B27.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.84
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G112.89
heart, neonate N20.CNhs11127.821-26I613.16
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D212.21
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I335.02
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A57.99
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E317.29
intestine, neonate N30.CNhs11131.1384-42G123.30
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D55.69
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H18.76
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F49.08
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C77.08
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A312.07
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I55.25
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I112.24
spinal cord, adult.CNhs10505.24-13C917.24
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H18.75
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.63
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A96.69
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C113.67
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D34.80
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A23.41
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism9.53e-1151
mucosa2.75e-0815
endoderm-derived structure1.95e-07118
endoderm1.95e-07118
presumptive endoderm1.95e-07118
organ component layer2.24e-0724
intestine2.51e-0731
digestive system3.05e-07116
digestive tract3.05e-07116
primitive gut3.05e-07116
intestinal mucosa3.42e-0713
wall of intestine3.42e-0713
gastrointestinal system mucosa3.42e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:4914344..4914364,-&oldid=4260757"