FFCP PHASE1:Mm9::chr12:4824467..4824478,+: Difference between revisions
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{{FFCP|EntrezGene=66055|HGNC=|MCL_coexpression_id=806|UniProt=P59708|association_with_transcript=53bp_to_ENSMUST00000046207,NM_025323,uc007myi.1_5end|description=CAGE_peak_2_at_0610009D07Rik_5end|id=chr12:4824467..4824478,+|ontology_enrichment_celltype=CL:0000034!3.31e-13!97;CL:0000144!2.91e-11!121;CL:0000012!2.91e-11!121;CL:0000723!8.08e-11!91;CL:0000048!8.08e-11!91;CL:0000988!2.13e-10!32;CL:0002032!2.13e-10!32;CL:0000037!2.13e-10!32;CL:0000566!2.13e-10!32;CL:0000837!2.13e-10!32;CL:0002371!5.96e-10!118;CL:0002320!3.75e-09!46;CL:0000134!3.75e-09!46;CL:0000063!4.11e-09!66;CL:0000738!6.61e-09!17;CL:0002087!6.61e-09!17;CL:0000548!1.36e-08!115;CL:0000004!1.36e-08!115;CL:0000255!1.36e-08!115;CL:0000838!1.80e-08!12;CL:0000084!6.60e-08!11;CL:0000827!6.60e-08!11;CL:0000542!6.82e-08!13;CL:0000051!6.82e-08!13;CL:0002031!2.67e-07!25|ontology_enrichment_celltype_v019_2=CL:0000034,1.85e-13,97;CL:0000723,4.88e-11,91;CL:0000048,4.88e-11,91;CL:0000988,8.46e-11,32;CL:0002032,8.46e-11,32;CL:0000037,8.46e-11,32;CL:0000837,8.46e-11,32;CL:0002320,1.55e-09,46;CL:0000134,1.55e-09,46;CL:0000738,5.65e-09,17;CL:0002087,5.65e-09,17;CL:0000838,1.55e-08,12;CL:0000084,5.76e-08,11;CL:0000827,5.76e-08,11;CL:0000542,5.95e-08,13;CL:0000051,5.95e-08,13;CL:0002031,1.20e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.69e-13!48;UBERON:0002390!7.05e-12!45;UBERON:0003061!7.05e-12!45;UBERON:0002384!3.75e-09!46;UBERON:0000072!5.99e-09!27;UBERON:0002370!2.22e-08!23;UBERON:0000974!2.22e-08!23;UBERON:0004807!2.22e-08!23;UBERON:0005058!2.22e-08!23;UBERON:0003351!2.22e-08!23;UBERON:0009113!2.22e-08!23;UBERON:0003295!2.22e-08!23;UBERON:0009722!2.22e-08!23;UBERON:0005562!2.22e-08!23;UBERON:0007690!2.22e-08!23;UBERON:0003408!2.40e-08!24;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0000063!1.43e-07!35;UBERON:0004177!1.69e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-13,48;UBERON:0002405,1.47e-13,48;UBERON:0002390,4.03e-12,45;UBERON:0003061,4.03e-12,45;UBERON:0002384,1.55e-09,46;UBERON:0000077,2.05e-09,35;UBERON:0000072,3.56e-09,27;UBERON:0002370,1.31e-08,23;UBERON:0000974,1.31e-08,23;UBERON:0004807,1.31e-08,23;UBERON:0005058,1.31e-08,23;UBERON:0003351,1.31e-08,23;UBERON:0009113,1.31e-08,23;UBERON:0003295,1.31e-08,23;UBERON:0009722,1.31e-08,23;UBERON:0005562,1.31e-08,23;UBERON:0007690,1.31e-08,23;UBERON:0003408,1.43e-08,24;UBERON:0006562,4.55e-08,24;UBERON:0001557,4.55e-08,24;UBERON:0001042,4.55e-08,24;UBERON:0008814,4.55e-08,24;UBERON:0009145,4.55e-08,24;UBERON:0004177,1.08e-07,29;UBERON:0005057,1.08e-07,29|phase1_expression=0.960893082628764,1.39590163055744,1.81999695755814,2.11724947914781,0,2.51818907867835,3.03696432774183,7.10178278928669,19.1472662126267,20.5976783163354,6.16384685611818,6.86040567359893,9.75844160607873,9.79108507092771,1.66554880907831,2.63217847606774,5.59649502502517,6.62470547252299,5.21034847701807,3.39511721438424,1.53077922271926,13.4042784121195,15.6719873483361,5.91971964335605,6.8822784320151,2.8711598205751,3.01533397311352,4.52489588640367,5.51067916423484,4.53654233567875,7.09537634096975,1.27006134691926,0,0,2.88851619751275,4.98703936075477,4.08338712524738,20.9265815368454,35.160090503571,18.8468547830567,18.8234076169925,12.294818729252,16.9928623560904,2.39203954153597,2.83855407414641,2.9367480345869,3.12956537739216,0.872100625521786,0.878744730937887,0.972149495371417,1.39986421625363,0,9.56360854529097,18.1340535502836,14.1159395639835,0.771778308107841,0.573066879877513,0,1.61853168687678,3.1739458756322,3.80298842103708,1.0165335962074,2.66788438833342,2.6996991518442,2.96659908770092,2.8419204597844,2.39680088414724,5.76327457982332,2.48855069540346,4.99521971827255,2.10324961351382,1.42825492201902,4.8591079009355,2.32732518508413,2.20444583341944,0.919218786610021,4.40463523997555,2.042997409363,2.91852413186863,3.16527090552465,3.11057988248193,3.12548022334056,1.95428099300967,5.6276261003168,2.29197371665215,3.24091444021034,2.56269025438385,2.79599168737951,1.81742863999642,1.13357340160178,3.47837386442013,0.860423876981386,4.75979933595425,1.61910957491345,1.94932925234301,0,1.96622188184453,4.4311883870295,4.41636207824877,1.7666978725517,0.985903938436763,2.56652954828636,2.54805239706646,0,3.24736561516821,6.08063677140237,6.57181778519218,2.2836775943812,6.99132285847364,1.33597925158342,1.56136794089522,3.95805121805784,1.38369298353635,0.301445281105245,2.70454026412121,0.628332956648377,3.70792451601561,1.01219549843938,1.76922110389975,1.45590164952668,2.87093973998512,2.42437626567611,7.45567044872489,1.17112318804619,1.04723353406728,3.0654846625031,17.2533779288525,13.7977628128484,21.7290088294941,1.79748767285787,3.20250421973039,1.7591609295801,1.73824320192276,0.767146371990992,1.0389402227978,2.27137768294861,3.05518091550949,3.98102305952298,6.31806896084187,2.10441855886474,0.390361328888111,0.91960841773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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66055 | |||
|HGNC= | |||
|MCL_coexpression_id=806 | |||
|TSSclassifier=NA | |||
|UniProt=P59708 | |||
|association_with_transcript=53bp_to_ENSMUST00000046207,NM_025323,uc007myi.1_5end | |||
|cluster_id=chr12:4824467..4824478,+ | |||
|description=CAGE_peak_2_at_0610009D07Rik_5end | |||
|id=chr12:4824467..4824478,+ | |||
|ontology_enrichment_celltype=CL:0000034!3.31e-13!97;CL:0000144!2.91e-11!121;CL:0000012!2.91e-11!121;CL:0000723!8.08e-11!91;CL:0000048!8.08e-11!91;CL:0000988!2.13e-10!32;CL:0002032!2.13e-10!32;CL:0000037!2.13e-10!32;CL:0000566!2.13e-10!32;CL:0000837!2.13e-10!32;CL:0002371!5.96e-10!118;CL:0002320!3.75e-09!46;CL:0000134!3.75e-09!46;CL:0000063!4.11e-09!66;CL:0000738!6.61e-09!17;CL:0002087!6.61e-09!17;CL:0000548!1.36e-08!115;CL:0000004!1.36e-08!115;CL:0000255!1.36e-08!115;CL:0000838!1.80e-08!12;CL:0000084!6.60e-08!11;CL:0000827!6.60e-08!11;CL:0000542!6.82e-08!13;CL:0000051!6.82e-08!13;CL:0002031!2.67e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.85e-13,97;CL:0000723,4.88e-11,91;CL:0000048,4.88e-11,91;CL:0000988,8.46e-11,32;CL:0002032,8.46e-11,32;CL:0000037,8.46e-11,32;CL:0000837,8.46e-11,32;CL:0002320,1.55e-09,46;CL:0000134,1.55e-09,46;CL:0000738,5.65e-09,17;CL:0002087,5.65e-09,17;CL:0000838,1.55e-08,12;CL:0000084,5.76e-08,11;CL:0000827,5.76e-08,11;CL:0000542,5.95e-08,13;CL:0000051,5.95e-08,13;CL:0002031,1.20e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.69e-13!48;UBERON:0002390!7.05e-12!45;UBERON:0003061!7.05e-12!45;UBERON:0002384!3.75e-09!46;UBERON:0000072!5.99e-09!27;UBERON:0002370!2.22e-08!23;UBERON:0000974!2.22e-08!23;UBERON:0004807!2.22e-08!23;UBERON:0005058!2.22e-08!23;UBERON:0003351!2.22e-08!23;UBERON:0009113!2.22e-08!23;UBERON:0003295!2.22e-08!23;UBERON:0009722!2.22e-08!23;UBERON:0005562!2.22e-08!23;UBERON:0007690!2.22e-08!23;UBERON:0003408!2.40e-08!24;UBERON:0006562!7.43e-08!24;UBERON:0001557!7.43e-08!24;UBERON:0001042!7.43e-08!24;UBERON:0008814!7.43e-08!24;UBERON:0009145!7.43e-08!24;UBERON:0000063!1.43e-07!35;UBERON:0004177!1.69e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-13,48;UBERON:0002405,1.47e-13,48;UBERON:0002390,4.03e-12,45;UBERON:0003061,4.03e-12,45;UBERON:0002384,1.55e-09,46;UBERON:0000077,2.05e-09,35;UBERON:0000072,3.56e-09,27;UBERON:0002370,1.31e-08,23;UBERON:0000974,1.31e-08,23;UBERON:0004807,1.31e-08,23;UBERON:0005058,1.31e-08,23;UBERON:0003351,1.31e-08,23;UBERON:0009113,1.31e-08,23;UBERON:0003295,1.31e-08,23;UBERON:0009722,1.31e-08,23;UBERON:0005562,1.31e-08,23;UBERON:0007690,1.31e-08,23;UBERON:0003408,1.43e-08,24;UBERON:0006562,4.55e-08,24;UBERON:0001557,4.55e-08,24;UBERON:0001042,4.55e-08,24;UBERON:0008814,4.55e-08,24;UBERON:0009145,4.55e-08,24;UBERON:0004177,1.08e-07,29;UBERON:0005057,1.08e-07,29 | |||
|phase1_expression=0.960893082628764,1.39590163055744,1.81999695755814,2.11724947914781,0,2.51818907867835,3.03696432774183,7.10178278928669,19.1472662126267,20.5976783163354,6.16384685611818,6.86040567359893,9.75844160607873,9.79108507092771,1.66554880907831,2.63217847606774,5.59649502502517,6.62470547252299,5.21034847701807,3.39511721438424,1.53077922271926,13.4042784121195,15.6719873483361,5.91971964335605,6.8822784320151,2.8711598205751,3.01533397311352,4.52489588640367,5.51067916423484,4.53654233567875,7.09537634096975,1.27006134691926,0,0,2.88851619751275,4.98703936075477,4.08338712524738,20.9265815368454,35.160090503571,18.8468547830567,18.8234076169925,12.294818729252,16.9928623560904,2.39203954153597,2.83855407414641,2.9367480345869,3.12956537739216,0.872100625521786,0.878744730937887,0.972149495371417,1.39986421625363,0,9.56360854529097,18.1340535502836,14.1159395639835,0.771778308107841,0.573066879877513,0,1.61853168687678,3.1739458756322,3.80298842103708,1.0165335962074,2.66788438833342,2.6996991518442,2.96659908770092,2.8419204597844,2.39680088414724,5.76327457982332,2.48855069540346,4.99521971827255,2.10324961351382,1.42825492201902,4.8591079009355,2.32732518508413,2.20444583341944,0.919218786610021,4.40463523997555,2.042997409363,2.91852413186863,3.16527090552465,3.11057988248193,3.12548022334056,1.95428099300967,5.6276261003168,2.29197371665215,3.24091444021034,2.56269025438385,2.79599168737951,1.81742863999642,1.13357340160178,3.47837386442013,0.860423876981386,4.75979933595425,1.61910957491345,1.94932925234301,0,1.96622188184453,4.4311883870295,4.41636207824877,1.7666978725517,0.985903938436763,2.56652954828636,2.54805239706646,0,3.24736561516821,6.08063677140237,6.57181778519218,2.2836775943812,6.99132285847364,1.33597925158342,1.56136794089522,3.95805121805784,1.38369298353635,0.301445281105245,2.70454026412121,0.628332956648377,3.70792451601561,1.01219549843938,1.76922110389975,1.45590164952668,2.87093973998512,2.42437626567611,7.45567044872489,1.17112318804619,1.04723353406728,3.0654846625031,17.2533779288525,13.7977628128484,21.7290088294941,1.79748767285787,3.20250421973039,1.7591609295801,1.73824320192276,0.767146371990992,1.0389402227978,2.27137768294861,3.05518091550949,3.98102305952298,6.31806896084187,2.10441855886474,0.390361328888111,0.919608417733892,1.62055916824814,1.35634336052144,1.29269348387523,0.768682321709099,0.937017245597288,1.29351685369508,1.72454394346274,1.70195472151037,1.40760899331159,1.31517439456545,3.05851974148158,1.39300866608867,3.2925141825271,2.38841120182192,11.2354109970118,9.00717674901503,13.0715209721973,1.44988040774851,0.703578179943289,0.36012412292203,1.18372367792605,0.393528463494808,0.308534225774757,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,1.31333971263276,0.405344047729279,0.292399974850665,0.658650345873152,0.536825675041487,1.68231958851302,6.17427674275707,1.32167513193519,3.70230793328962,1.70630600428187,1.62565670302307,0.515469845288373,1.81515172161008,0.889512175379481,3.23383564391351,1.89811624617805,2.63518327558417,2.5133520880027,2.58643413653496,2.14460495831032,2.69645822596266,3.02593269824572,3.58454291857861,1.32767530667157,1.48523066392647,3.38123207019241,1.22190796707189,1.55161989734101,2.24434623649019,1.26473074248515,0.442830443938806,0.470996183524124,1.60416313098341,0.296452627087149,0.500535317148282,0.196558995113203,0.899448449539415,1.21716072833102,0.241177159752417,1.52775511068852,1.43848068725405,3.08056930872567,0.549122826376163,1.43768206527355,1.11642284300551,1.5601883655728,0.757736633841335,0.896987067609561,1.4473305640901,2.58654466233247,1.32643988239339,1.46668478797823,1.01847051465113,0.938760993154008,1.34005005953453,0.238043640886014,1.17080188714679,1.7339865851681,1.7717175171902,1.91345722388985,1.96635977658886,2.07221978239075,1.59113964439663,4.52373851817817,6.52686820582452,7.37646409528554,3.58717770196152,1.76605648986571,1.99259867206745,2.29508923527346,0.757412781613119,2.2085575359138,1.95219372148319,1.93881057959519,2.62865677747807,1.11399337041197,1.13230612315533,1.61924280669958,2.33804686329049,2.37172666767914,0.642642632843614,1.27746076687442,1.06839362200353,3.4206261464251,0.824850614862677,0,1.94224508923985,1.51161778482376,1.13163047853539,0.590603785761546,0.307435147943927,2.32585463851399,0.727067458955011,1.06949213515416,1.26414703174326,0,0,3.06395645178409,1.08036656418786,1.94038025674132,0.857348140126369,0.886701168211368,1.24858172321449,1.48094118541909,1.2178597964584,6.33613611772018,6.35496212591461,1.98475558249466,1.48397627647332,5.48979050766079,3.07595917133595,2.26807453605959,0.984845398470368,2.91480836629851,1.29797711407357,4.44264290074417,1.44470807574256,2.40752885580625,2.44878994106098,2.05041341581538,1.14389086603261,7.64902934972349,9.79660166265606,12.1615976947893,2.86401185404534,1.10717597753397,0.813277868507395,2.80813886136683,2.92723614420256,2.83871332870031,2.96701562046606,1.570415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| |||
|short_description=p2@0610009D07Rik | |||
}} |
Latest revision as of 15:27, 26 September 2015
Short description: | p2@0610009D07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_0610009D07Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:806 |
Association with transcript: | 53bp_to_ENSMUST00000046207, NM_025323, uc007myi.1_5end |
EntrezGene: | 0610009D07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.85e-13 | 97 |
somatic stem cell | 4.88e-11 | 91 |
multi fate stem cell | 4.88e-11 | 91 |
hematopoietic cell | 8.46e-11 | 32 |
hematopoietic oligopotent progenitor cell | 8.46e-11 | 32 |
hematopoietic stem cell | 8.46e-11 | 32 |
hematopoietic multipotent progenitor cell | 8.46e-11 | 32 |
connective tissue cell | 1.55e-09 | 46 |
mesenchymal cell | 1.55e-09 | 46 |
leukocyte | 5.65e-09 | 17 |
nongranular leukocyte | 5.65e-09 | 17 |
lymphoid lineage restricted progenitor cell | 1.55e-08 | 12 |
T cell | 5.76e-08 | 11 |
pro-T cell | 5.76e-08 | 11 |
lymphocyte | 5.95e-08 | 13 |
common lymphoid progenitor | 5.95e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 1.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.47e-13 | 48 |
immune system | 1.47e-13 | 48 |
hematopoietic system | 4.03e-12 | 45 |
blood island | 4.03e-12 | 45 |
connective tissue | 1.55e-09 | 46 |
mixed endoderm/mesoderm-derived structure | 2.05e-09 | 35 |
segment of respiratory tract | 3.56e-09 | 27 |
thymus | 1.31e-08 | 23 |
neck | 1.31e-08 | 23 |
respiratory system epithelium | 1.31e-08 | 23 |
hemolymphoid system gland | 1.31e-08 | 23 |
pharyngeal epithelium | 1.31e-08 | 23 |
thymic region | 1.31e-08 | 23 |
pharyngeal gland | 1.31e-08 | 23 |
entire pharyngeal arch endoderm | 1.31e-08 | 23 |
thymus primordium | 1.31e-08 | 23 |
early pharyngeal endoderm | 1.31e-08 | 23 |
gland of gut | 1.43e-08 | 24 |
pharynx | 4.55e-08 | 24 |
upper respiratory tract | 4.55e-08 | 24 |
chordate pharynx | 4.55e-08 | 24 |
pharyngeal arch system | 4.55e-08 | 24 |
pharyngeal region of foregut | 4.55e-08 | 24 |
hemopoietic organ | 1.08e-07 | 29 |
immune organ | 1.08e-07 | 29 |