FFCP PHASE1:Mm9::chr12:47919913..47919924,-: Difference between revisions
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{{FFCP|EntrezGene=664883|HGNC=|MCL_coexpression_id=87|UniProt=Q9JKN6|association_with_transcript=-151bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end|description=CAGE_peak_5_at_Nova1_5end|id=chr12:47919913..47919924,-|ontology_enrichment_celltype=CL:0000117!1.70e-12!23;CL:0000337!1.70e-12!23;CL:0000540!5.20e-12!33;CL:0000047!5.20e-12!33;CL:0000031!5.20e-12!33;CL:0000404!5.20e-12!33;CL:0002319!9.17e-10!43;CL:0000221!2.88e-09!44;CL:0000133!2.88e-09!44;CL:0000393!1.92e-08!39;CL:0000211!1.92e-08!39;CL:0000055!8.64e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.20e-20,23;CL:0000337,9.20e-20,23;CL:0000540,1.73e-13,33;CL:0000047,1.73e-13,33;CL:0000031,1.73e-13,33;CL:0000404,1.73e-13,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002319,4.24e-09,43;CL:0000221,8.95e-09,44;CL:0000133,8.95e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.30e-27!73;UBERON:0005743!3.30e-27!73;UBERON:0000073!1.84e-26!75;UBERON:0001016!1.84e-26!75;UBERON:0004121!8.85e-26!102;UBERON:0000924!8.85e-26!102;UBERON:0006601!8.85e-26!102;UBERON:0000033!2.38e-22!63;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0002346!8.54e-21!71;UBERON:0003075!8.54e-21!71;UBERON:0007284!8.54e-21!71;UBERON:0003056!1.25e-19!49;UBERON:0000955!2.32e-19!50;UBERON:0006238!2.32e-19!50;UBERON:0002616!1.17e-18!49;UBERON:0002020!1.06e-16!34;UBERON:0003080!1.20e-15!40;UBERON:0002780!7.29e-15!39;UBERON:0001890!7.29e-15!39;UBERON:0006240!7.29e-15!39;UBERON:0002791!9.71e-13!29;UBERON:0003528!9.71e-13!29;UBERON:0001893!9.71e-13!29;UBERON:0007811!1.32e-10!86;UBERON:0002619!3.95e-09!17;UBERON:0000153!4.61e-09!94;UBERON:0000956!5.86e-09!21;UBERON:0001869!5.86e-09!21;UBERON:0000203!5.86e-09!21;UBERON:0002021!6.64e-08!10;UBERON:0000411!6.64e-08!10;UBERON:0001950!6.64e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-29,54;UBERON:0001017,4.70e-29,73;UBERON:0001016,5.83e-28,75;UBERON:0001049,1.86e-27,52;UBERON:0005068,1.86e-27,52;UBERON:0006241,1.86e-27,52;UBERON:0007135,1.86e-27,52;UBERON:0002020,1.96e-27,34;UBERON:0002346,1.16e-26,64;UBERON:0003075,1.16e-26,64;UBERON:0007284,1.16e-26,64;UBERON:0004121,8.57e-25,95;UBERON:0000924,8.57e-25,95;UBERON:0006601,8.57e-25,95;UBERON:0010371,4.99e-22,73;UBERON:0000955,1.61e-20,47;UBERON:0006238,1.61e-20,47;UBERON:0003528,4.52e-20,29;UBERON:0002791,4.52e-20,29;UBERON:0001893,4.52e-20,29;UBERON:0002616,2.18e-19,46;UBERON:0003056,7.94e-19,49;UBERON:0003080,9.36e-18,40;UBERON:0002780,1.75e-16,39;UBERON:0001890,1.75e-16,39;UBERON:0006240,1.75e-16,39;UBERON:0010314,2.87e-15,92;UBERON:0002619,4.84e-14,17;UBERON:0002021,9.94e-14,10;UBERON:0000411,9.94e-14,10;UBERON:0001950,9.94e-14,10;UBERON:0000956,1.55e-12,21;UBERON:0001869,1.55e-12,21;UBERON:0000203,1.55e-12,21;UBERON:0002240,7.31e-11,6;UBERON:0005174,7.31e-11,6;UBERON:0001137,7.31e-11,6;UBERON:0003076,1.43e-10,12;UBERON:0003057,1.43e-10,12;UBERON:0001948,2.84e-09,5;UBERON:0002315,2.84e-09,5;UBERON:0002420,4.84e-09,8;UBERON:0007245,4.84e-09,8;UBERON:0010009,4.84e-09,8;UBERON:0010011,4.84e-09,8;UBERON:0000454,4.84e-09,8;UBERON:0000369,4.67e-08,5;UBERON:0002435,4.67e-08,5;UBERON:0000204,4.67e-08,5;UBERON:0010082,4.67e-08,5;UBERON:0000025,2.18e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,5.66486090406874,13.2247744818008,6.33831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0,0.210324961351382,4.85606673486466,6.40518768759679,1.10241719293459,0.479227355091182,3.67687514644008,1.10115880999389,4.85211884723713,4.30098293117482,5.27545150920775,7.77644970620482,4.68822033501084,2.79182999001381,0,2.44477196442896,6.48182888042069,8.11518580554887,6.71038004971082,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.46612694769419,0,0,0,0,7.33974133083631,1.83000241127451,1.38219787324151,3.12883776346098,1.79000820131231,6.02585329222724,1.62241263067758,0.203678727700633,0,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,1.26043490863744,1.9591626318643,2.10913147369116,0.640568601424249,0.937017245597288,2.58703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,7.70642831941401,5.50894926983355,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,2.89189184779626,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0.179427713218951,0,0,0,0.36630324853453,0,0,1.6942555278512,2.30162618253588,3.43737308063638,2.57779773515531,3.42541259885321,3.7769694869485,2.02506750069542,1.35096360967266,4.53142408984205,2.5888015587591,0.62272408550506,1.19707462020309,1.36586884603307,0.729320151204882,1.46729213839588,0.735374033800057,0.222246727801615,1.64828045791115,2.24643446714271,1.01078884705519,1.2673964994512,0.565879024158229,0.936415074698824,0.448176066834085,0.746661096422973,1.90517476513229,1.15884325944855,0.38581844092741,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0.715308569841963,1.0174249164263,0.941093804153306,0.846146078916765,1.09756783723664,0.526139422875686,1.08643291076689,2.24456908663095,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,0.964533054905707,0.749431733813838,0.701794825336225,1.28922632428979,0.382576664137687,0.220591419119515,0.231867835620421|short_description=p5@Nova1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=664883 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JKN6 | |||
|association_with_transcript=-151bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end | |||
|cluster_id=chr12:47919913..47919924,- | |||
|description=CAGE_peak_5_at_Nova1_5end | |||
|id=chr12:47919913..47919924,- | |||
|ontology_enrichment_celltype=CL:0000117!1.70e-12!23;CL:0000337!1.70e-12!23;CL:0000540!5.20e-12!33;CL:0000047!5.20e-12!33;CL:0000031!5.20e-12!33;CL:0000404!5.20e-12!33;CL:0002319!9.17e-10!43;CL:0000221!2.88e-09!44;CL:0000133!2.88e-09!44;CL:0000393!1.92e-08!39;CL:0000211!1.92e-08!39;CL:0000055!8.64e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.20e-20,23;CL:0000337,9.20e-20,23;CL:0000540,1.73e-13,33;CL:0000047,1.73e-13,33;CL:0000031,1.73e-13,33;CL:0000404,1.73e-13,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002319,4.24e-09,43;CL:0000221,8.95e-09,44;CL:0000133,8.95e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-27!73;UBERON:0005743!3.30e-27!73;UBERON:0000073!1.84e-26!75;UBERON:0001016!1.84e-26!75;UBERON:0004121!8.85e-26!102;UBERON:0000924!8.85e-26!102;UBERON:0006601!8.85e-26!102;UBERON:0000033!2.38e-22!63;UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0002346!8.54e-21!71;UBERON:0003075!8.54e-21!71;UBERON:0007284!8.54e-21!71;UBERON:0003056!1.25e-19!49;UBERON:0000955!2.32e-19!50;UBERON:0006238!2.32e-19!50;UBERON:0002616!1.17e-18!49;UBERON:0002020!1.06e-16!34;UBERON:0003080!1.20e-15!40;UBERON:0002780!7.29e-15!39;UBERON:0001890!7.29e-15!39;UBERON:0006240!7.29e-15!39;UBERON:0002791!9.71e-13!29;UBERON:0003528!9.71e-13!29;UBERON:0001893!9.71e-13!29;UBERON:0007811!1.32e-10!86;UBERON:0002619!3.95e-09!17;UBERON:0000153!4.61e-09!94;UBERON:0000956!5.86e-09!21;UBERON:0001869!5.86e-09!21;UBERON:0000203!5.86e-09!21;UBERON:0002021!6.64e-08!10;UBERON:0000411!6.64e-08!10;UBERON:0001950!6.64e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.34e-29,54;UBERON:0001017,4.70e-29,73;UBERON:0001016,5.83e-28,75;UBERON:0001049,1.86e-27,52;UBERON:0005068,1.86e-27,52;UBERON:0006241,1.86e-27,52;UBERON:0007135,1.86e-27,52;UBERON:0002020,1.96e-27,34;UBERON:0002346,1.16e-26,64;UBERON:0003075,1.16e-26,64;UBERON:0007284,1.16e-26,64;UBERON:0004121,8.57e-25,95;UBERON:0000924,8.57e-25,95;UBERON:0006601,8.57e-25,95;UBERON:0010371,4.99e-22,73;UBERON:0000955,1.61e-20,47;UBERON:0006238,1.61e-20,47;UBERON:0003528,4.52e-20,29;UBERON:0002791,4.52e-20,29;UBERON:0001893,4.52e-20,29;UBERON:0002616,2.18e-19,46;UBERON:0003056,7.94e-19,49;UBERON:0003080,9.36e-18,40;UBERON:0002780,1.75e-16,39;UBERON:0001890,1.75e-16,39;UBERON:0006240,1.75e-16,39;UBERON:0010314,2.87e-15,92;UBERON:0002619,4.84e-14,17;UBERON:0002021,9.94e-14,10;UBERON:0000411,9.94e-14,10;UBERON:0001950,9.94e-14,10;UBERON:0000956,1.55e-12,21;UBERON:0001869,1.55e-12,21;UBERON:0000203,1.55e-12,21;UBERON:0002240,7.31e-11,6;UBERON:0005174,7.31e-11,6;UBERON:0001137,7.31e-11,6;UBERON:0003076,1.43e-10,12;UBERON:0003057,1.43e-10,12;UBERON:0001948,2.84e-09,5;UBERON:0002315,2.84e-09,5;UBERON:0002420,4.84e-09,8;UBERON:0007245,4.84e-09,8;UBERON:0010009,4.84e-09,8;UBERON:0010011,4.84e-09,8;UBERON:0000454,4.84e-09,8;UBERON:0000369,4.67e-08,5;UBERON:0002435,4.67e-08,5;UBERON:0000204,4.67e-08,5;UBERON:0010082,4.67e-08,5;UBERON:0000025,2.18e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,5.66486090406874,13.2247744818008,6.33831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0,0.210324961351382,4.85606673486466,6.40518768759679,1.10241719293459,0.479227355091182,3.67687514644008,1.10115880999389,4.85211884723713,4.30098293117482,5.27545150920775,7.77644970620482,4.68822033501084,2.79182999001381,0,2.44477196442896,6.48182888042069,8.11518580554887,6.71038004971082,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.46612694769419,0,0,0,0,7.33974133083631,1.83000241127451,1.38219787324151,3.12883776346098,1.79000820131231,6.02585329222724,1.62241263067758,0.203678727700633,0,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,1.26043490863744,1.9591626318643,2.10913147369116,0.640568601424249,0.937017245597288,2.58703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,1.47202963994889,1.23485534855141,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.551873492609465,7.70642831941401,5.50894926983355,0,0.504941854408746,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,1.18586333383957,2.89189184779626,0.283880170416537,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0.645857706783622,0.301564624640779,0.238744688006273,0,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0.221985953374065,0.179427713218951,0,0,0,0.36630324853453,0,0,1.6942555278512,2.30162618253588,3.43737308063638,2.57779773515531,3.42541259885321,3.7769694869485,2.02506750069542,1.35096360967266,4.53142408984205,2.5888015587591,0.62272408550506,1.19707462020309,1.36586884603307,0.729320151204882,1.46729213839588,0.735374033800057,0.222246727801615,1.64828045791115,2.24643446714271,1.01078884705519,1.2673964994512,0.565879024158229,0.936415074698824,0.448176066834085,0.746661096422973,1.90517476513229,1.15884325944855,0.38581844092741,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0.715308569841963,1.0174249164263,0.941093804153306,0.846146078916765,1.09756783723664,0.526139422875686,1.08643291076689,2.24456908663095,0.830445126869219,0.394017929502254,0.818462086339379,0.309873682371932,0.964533054905707,0.749431733813838,0.701794825336225,1.28922632428979,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Nova1 | |||
}} |
Latest revision as of 15:24, 26 September 2015
Short description: | p5@Nova1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Nova1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -151bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end |
EntrezGene: | Nova1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.20e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.20e-20 | 23 |
neuron | 1.73e-13 | 33 |
neuronal stem cell | 1.73e-13 | 33 |
neuroblast | 1.73e-13 | 33 |
electrically signaling cell | 1.73e-13 | 33 |
electrically responsive cell | 1.42e-10 | 39 |
electrically active cell | 1.42e-10 | 39 |
neural cell | 4.24e-09 | 43 |
ectodermal cell | 8.95e-09 | 44 |
neurectodermal cell | 8.95e-09 | 44 |