Personal tools

FFCP PHASE1:Mm9::chr7:3169062..3169081,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245128
|EntrezGene=245128
|HGNC=
|HGNC=
|MCL_coexpression_id=97
|TSSclassifier=NA
|UniProt=Q0PDJ1
|UniProt=Q0PDJ1
|association_with_transcript=122bp_to_ENSMUST00000067969_5end
|association_with_transcript=122bp_to_ENSMUST00000067969_5end
|cluster_id=chr7:3169062..3169081,-
|description=CAGE_peak_2_at_AU018091_5end
|description=CAGE_peak_2_at_AU018091_5end
|id=chr7:3169062..3169081,-
|id=chr7:3169062..3169081,-
|ontology_enrichment_celltype=CL:0000349!3.14e-11!3;CL:0000351!3.14e-11!3
|ontology_enrichment_celltype_v019_2=CL:0000349,9.07e-28,3;CL:0000351,9.07e-28,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000014!1.42e-16!5;UBERON:0001003!1.42e-16!5;UBERON:0002097!1.42e-16!5;UBERON:0002199!1.42e-16!5;UBERON:0007029!1.42e-16!5;UBERON:0007376!1.42e-16!5;UBERON:0002416!1.42e-16!5;UBERON:0007383!1.42e-16!5;UBERON:0000358!3.14e-11!3;UBERON:0000307!3.14e-11!3;UBERON:0005631!6.66e-11!3;UBERON:0000478!6.66e-11!3;UBERON:0000158!6.66e-11!3;UBERON:0005178!4.08e-10!17;UBERON:0005181!4.08e-10!17;UBERON:0002224!4.08e-10!17;UBERON:0000915!4.08e-10!17;UBERON:0008947!4.08e-10!17;UBERON:0003258!4.08e-10!17;UBERON:0001987!6.39e-08!2;UBERON:0003124!6.39e-08!2;UBERON:0004340!6.39e-08!2;UBERON:0005795!6.44e-08!4;UBERON:0000995!6.44e-08!4;UBERON:0002048!5.67e-07!14;UBERON:0000117!5.67e-07!14;UBERON:0000171!5.67e-07!14;UBERON:0000170!5.67e-07!14;UBERON:0005597!5.67e-07!14;UBERON:0000118!5.67e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000358,9.07e-28,3;UBERON:0000307,9.07e-28,3;UBERON:0007010,9.07e-28,3;UBERON:0000014,9.24e-28,5;UBERON:0001003,9.24e-28,5;UBERON:0002097,9.24e-28,5;UBERON:0002199,9.24e-28,5;UBERON:0007029,9.24e-28,5;UBERON:0007376,9.24e-28,5;UBERON:0002416,9.24e-28,5;UBERON:0007383,9.24e-28,5;UBERON:0005631,6.99e-27,3;UBERON:0000478,6.99e-27,3;UBERON:0000158,6.99e-27,3;UBERON:0001987,8.62e-19,2;UBERON:0003124,8.62e-19,2;UBERON:0004340,8.62e-19,2;UBERON:0005795,6.92e-10,4;UBERON:0000995,6.92e-10,4;UBERON:0000305,8.42e-10,1;UBERON:0003975,4.35e-08,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0,0,0,0,0,0,0,0,0,3.70792451601561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9069439435041,26.4790088579775,0,4.61681508236144,0.484393280087717,1.44751019827574,6.32673423216623,8.86360858623331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2071010159401,32.8352715190681,27.1973078509807,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0,0.505524445014783,0,0,0,0,0,0,0,0,0,3.70792451601561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9069439435041,26.4790088579775,0,4.61681508236144,0.484393280087717,1.44751019827574,6.32673423216623,8.86360858623331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2071010159401,32.8352715190681,27.1973078509807,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0,0
|short_description=p2@AU018091
|short_description=p2@AU018091
}}
}}

Latest revision as of 15:22, 26 September 2015

Short description:p2@AU018091
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_AU018091_5end
Coexpression cluster:MCL_coexpression_mm9:97
Association with transcript: 122bp_to_ENSMUST00000067969_5end
EntrezGene:AU018091
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25
30
35




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data