FFCP PHASE1:Mm9::chr4:140221769..140221782,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72754 | |EntrezGene=72754 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1155 | |MCL_coexpression_id=1155 | ||
|TSSclassifier=NA | |||
|UniProt=A2AWP8 | |UniProt=A2AWP8 | ||
|association_with_transcript=37bp_to_ENSMUST00000105800,ENSMUST00000164152,NM_001112722,uc008vmy.2_5end | |association_with_transcript=37bp_to_ENSMUST00000105800,ENSMUST00000164152,NM_001112722,uc008vmy.2_5end | ||
|cluster_id=chr4:140221769..140221782,- | |||
|description=CAGE_peak_2_at_Arhgef10l_5end | |description=CAGE_peak_2_at_Arhgef10l_5end | ||
|id=chr4:140221769..140221782,- | |id=chr4:140221769..140221782,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!1.52e-10!17;UBERON:0006554!1.01e-09!16;UBERON:0002113!3.77e-08!14;UBERON:0003918!3.77e-08!14;UBERON:0005095!3.77e-08!14;UBERON:0007687!3.77e-08!14 | |ontology_enrichment_uberon=UBERON:0001008!1.52e-10!17;UBERON:0006554!1.01e-09!16;UBERON:0002113!3.77e-08!14;UBERON:0003918!3.77e-08!14;UBERON:0005095!3.77e-08!14;UBERON:0007687!3.77e-08!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,7.80e-11,19;UBERON:0006554,9.70e-10,18;UBERON:0002113,3.02e-09,14;UBERON:0003918,3.02e-09,14;UBERON:0011143,3.02e-09,14;UBERON:0005095,3.02e-09,14;UBERON:0007687,3.02e-09,14;UBERON:0003102,5.50e-08,22;UBERON:0000161,9.45e-08,5;UBERON:0000014,3.34e-07,5;UBERON:0001003,3.34e-07,5;UBERON:0002097,3.34e-07,5;UBERON:0002199,3.34e-07,5;UBERON:0007029,3.34e-07,5;UBERON:0007376,3.34e-07,5;UBERON:0002416,3.34e-07,5;UBERON:0007383,3.34e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,3.46385665617943,3.29367825117628,3.53867111510348,2.39786147410026,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0,0,0,0.433798070759735,0,0.161766849947409,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,3.6078021476927,7.07623723614289,1.47309299120532,0,0,0.360124259610698,0.90422890701429,0.204109497453984,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0.657587197282725,3.33656699070717,9.05455632957633,10.906453229621,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0.948339504765408,1.37098215131675,1.1270773567308,2.24016460629846,1.55161989734101,2.52488951605147,3.22506339333712,1.77132177575523,3.29697328466887,3.08492909804501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.234690248288502,2.01007508930179,1.19021820443007,0,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,20.6540994667995,15.7283945393698,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.488660878060728,1.64970122972535,0,0,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0.847328283455281,18.0833286405069,9.56340267060584,12.1098320021929,5.72972786817481,12.4147237763262,18.712062570937,0,0,0,0.82554747185289,0,0,0,0,0.509935289981566,0.139951452323658,0.138199973804424,2.86401185404534,0,1.82987520414164,3.34816556547584,10.0362382086945,8.51613998610093,6.47348862647139,4.46328660916814,8.63794608547298,0.259229946583586,60.8912526825187,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.26404448251271,1.41907650703115,0.102710957164827,1.03936658382236,0.895133478337407,0.596044064343795,1.32214994471966,0.590758108698309,1.71642964911851,1.06689529317,1.91569751759997,1.36441033035653,0.865906574762965,1.16876902181569,26.0739941157493,0,0,0.167884616364078,24.7282680361204,2.43987218086537,2.56412273974171,46.9466750183154,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0,0.367687016900028,1.55572709461131,1.64828045791115,1.60459604795908,1.26348605881899,1.2673964994512,1.32038438970253,2.24739617927718,1.08842759088278,1.7230640686684,0.476293691283074,1.0429589335037,0.578727661391115,2.06042950401653,0.735994600671987,2.40008476669791,1.77475806159337,0.715308569841963,1.45346416632329,1.12931256498397,1.09998990259179,1.09756783723664,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,1.18205378850676,0.818462086339379,1.08455788830176,2.70069255373598,3.2475375131933,2.10538447600868,4.29742108096597,2.67803664896381,2.8676884485537,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0,0,0,0,0,0,0,1.26399978118577,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,3.46385665617943,3.29367825117628,3.53867111510348,2.39786147410026,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0,0,0,0.433798070759735,0,0.161766849947409,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,3.6078021476927,7.07623723614289,1.47309299120532,0,0,0.360124259610698,0.90422890701429,0.204109497453984,0.640568601424249,0.187403449119458,0.517406741478031,0,0,0.175951124163949,0.657587197282725,3.33656699070717,9.05455632957633,10.906453229621,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38660238396628,0.403367049246685,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0.948339504765408,1.37098215131675,1.1270773567308,2.24016460629846,1.55161989734101,2.52488951605147,3.22506339333712,1.77132177575523,3.29697328466887,3.08492909804501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.162964976442026,0.339490171550376,0.234690248288502,2.01007508930179,1.19021820443007,0,0.472905432318573,0.44292937929755,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,20.6540994667995,15.7283945393698,0.321101179975584,0.117211686592203,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.488660878060728,1.64970122972535,0,0,0,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0,0,1.05418608574999,0,1.02131881726136,0,0,0,0.177340233642274,0.178368817602071,0,0,0.469343416127421,0.847328283455281,18.0833286405069,9.56340267060584,12.1098320021929,5.72972786817481,12.4147237763262,18.712062570937,0,0,0,0.82554747185289,0,0,0,0,0.509935289981566,0.139951452323658,0.138199973804424,2.86401185404534,0,1.82987520414164,3.34816556547584,10.0362382086945,8.51613998610093,6.47348862647139,4.46328660916814,8.63794608547298,0.259229946583586,60.8912526825187,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.26404448251271,1.41907650703115,0.102710957164827,1.03936658382236,0.895133478337407,0.596044064343795,1.32214994471966,0.590758108698309,1.71642964911851,1.06689529317,1.91569751759997,1.36441033035653,0.865906574762965,1.16876902181569,26.0739941157493,0,0,0.167884616364078,24.7282680361204,2.43987218086537,2.56412273974171,46.9466750183154,13.5424468089548,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70174701947806,0,0.367687016900028,1.55572709461131,1.64828045791115,1.60459604795908,1.26348605881899,1.2673964994512,1.32038438970253,2.24739617927718,1.08842759088278,1.7230640686684,0.476293691283074,1.0429589335037,0.578727661391115,2.06042950401653,0.735994600671987,2.40008476669791,1.77475806159337,0.715308569841963,1.45346416632329,1.12931256498397,1.09998990259179,1.09756783723664,0.526139422875686,0.950628796921032,1.12228454331548,0.949080144993393,1.18205378850676,0.818462086339379,1.08455788830176,2.70069255373598,3.2475375131933,2.10538447600868,4.29742108096597,2.67803664896381,2.8676884485537,0.463735671240843 | ||
|short_description=p2@Arhgef10l | |short_description=p2@Arhgef10l | ||
}} | }} |
Latest revision as of 14:59, 26 September 2015
Short description: | p2@Arhgef10l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgef10l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1155 |
Association with transcript: | 37bp_to_ENSMUST00000105800, ENSMUST00000164152, NM_001112722, uc008vmy.2_5end |
EntrezGene: | Arhgef10l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
renal system | 7.80e-11 | 19 |
urinary system structure | 9.70e-10 | 18 |
kidney | 3.02e-09 | 14 |
kidney mesenchyme | 3.02e-09 | 14 |
upper urinary tract | 3.02e-09 | 14 |
kidney rudiment | 3.02e-09 | 14 |
kidney field | 3.02e-09 | 14 |
surface structure | 5.50e-08 | 22 |
orifice | 9.45e-08 | 5 |
zone of skin | 3.34e-07 | 5 |
skin epidermis | 3.34e-07 | 5 |
skin of body | 3.34e-07 | 5 |
integument | 3.34e-07 | 5 |
surface | 3.34e-07 | 5 |
outer epithelium | 3.34e-07 | 5 |
integumental system | 3.34e-07 | 5 |
enveloping layer of ectoderm | 3.34e-07 | 5 |