FFCP PHASE1:Mm9::chr9:35419500..35419503,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56872 | |EntrezGene=56872 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=Q09098 | |UniProt=Q09098 | ||
|association_with_transcript=16bp_to_ENSMUST00000034610_5end | |association_with_transcript=16bp_to_ENSMUST00000034610_5end | ||
|cluster_id=chr9:35419500..35419503,- | |||
|description=CAGE_peak_3_at_Pate4_5end | |description=CAGE_peak_3_at_Pate4_5end | ||
|id=chr9:35419500..35419503,- | |id=chr9:35419500..35419503,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010147!2.38e-26!2;UBERON:0003937!2.38e-26!2;UBERON:0005399!2.38e-26!2;UBERON:0000998!3.62e-14!1;UBERON:0007194!3.62e-14!1;UBERON:0006868!3.62e-14!1;UBERON:0002367!6.50e-14!1;UBERON:0009846!6.50e-14!1;UBERON:0003353!6.50e-14!1;UBERON:0004902!6.50e-14!1;UBERON:0003820!6.50e-14!1;UBERON:0009847!6.50e-14!1;UBERON:0000080!1.35e-13!4;UBERON:0005904!1.35e-13!4;UBERON:0006947!1.35e-13!4;UBERON:0002120!1.35e-13!4;UBERON:0004054!1.35e-13!4;UBERON:0004875!1.35e-13!4;UBERON:0004876!1.35e-13!4;UBERON:0005721!1.35e-13!4;UBERON:0005754!1.35e-13!4;UBERON:0007297!1.35e-13!4;UBERON:0004122!5.59e-11!5;UBERON:0000058!2.15e-09!6;UBERON:0003064!8.21e-09!14;UBERON:0006554!8.64e-08!16;UBERON:0003101!8.64e-08!16;UBERON:0000079!8.64e-08!16;UBERON:0001343!1.76e-07!2;UBERON:0004910!1.76e-07!2;UBERON:0004909!1.76e-07!2;UBERON:0005154!1.76e-07!2;UBERON:0005295!1.76e-07!2;UBERON:0005297!1.76e-07!2;UBERON:0005294!1.76e-07!2;UBERON:0010141!1.76e-07!2;UBERON:0005891!1.76e-07!2;UBERON:0001008!2.28e-07!17 | |ontology_enrichment_uberon=UBERON:0010147!2.38e-26!2;UBERON:0003937!2.38e-26!2;UBERON:0005399!2.38e-26!2;UBERON:0000998!3.62e-14!1;UBERON:0007194!3.62e-14!1;UBERON:0006868!3.62e-14!1;UBERON:0002367!6.50e-14!1;UBERON:0009846!6.50e-14!1;UBERON:0003353!6.50e-14!1;UBERON:0004902!6.50e-14!1;UBERON:0003820!6.50e-14!1;UBERON:0009847!6.50e-14!1;UBERON:0000080!1.35e-13!4;UBERON:0005904!1.35e-13!4;UBERON:0006947!1.35e-13!4;UBERON:0002120!1.35e-13!4;UBERON:0004054!1.35e-13!4;UBERON:0004875!1.35e-13!4;UBERON:0004876!1.35e-13!4;UBERON:0005721!1.35e-13!4;UBERON:0005754!1.35e-13!4;UBERON:0007297!1.35e-13!4;UBERON:0004122!5.59e-11!5;UBERON:0000058!2.15e-09!6;UBERON:0003064!8.21e-09!14;UBERON:0006554!8.64e-08!16;UBERON:0003101!8.64e-08!16;UBERON:0000079!8.64e-08!16;UBERON:0001343!1.76e-07!2;UBERON:0004910!1.76e-07!2;UBERON:0004909!1.76e-07!2;UBERON:0005154!1.76e-07!2;UBERON:0005295!1.76e-07!2;UBERON:0005297!1.76e-07!2;UBERON:0005294!1.76e-07!2;UBERON:0010141!1.76e-07!2;UBERON:0005891!1.76e-07!2;UBERON:0001008!2.28e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.07e-86,1;UBERON:0007194,3.07e-86,1;UBERON:0006868,3.07e-86,1;UBERON:0010147,4.52e-44,2;UBERON:0003937,4.52e-44,2;UBERON:0005399,4.52e-44,2;UBERON:0000080,6.52e-23,4;UBERON:0005904,6.52e-23,4;UBERON:0006947,6.52e-23,4;UBERON:0002120,6.52e-23,4;UBERON:0004054,6.52e-23,4;UBERON:0004875,6.52e-23,4;UBERON:0004876,6.52e-23,4;UBERON:0005721,6.52e-23,4;UBERON:0005754,6.52e-23,4;UBERON:0007297,6.52e-23,4;UBERON:0000058,8.67e-14,7;UBERON:0004175,4.56e-11,9;UBERON:0003887,4.12e-10,10;UBERON:0002113,1.22e-07,14;UBERON:0000473,1.22e-07,14;UBERON:0003918,1.22e-07,14;UBERON:0011143,1.22e-07,14;UBERON:0003064,1.22e-07,14;UBERON:0005095,1.22e-07,14;UBERON:0007687,1.22e-07,14;UBERON:0003135,3.18e-07,15;UBERON:0003101,7.35e-07,16;UBERON:0000079,7.35e-07,16 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0440189129902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0440189129902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Pate4 | |short_description=p3@Pate4 | ||
}} | }} |
Latest revision as of 14:18, 26 September 2015
Short description: | p3@Pate4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pate4_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | 16bp_to_ENSMUST00000034610_5end |
EntrezGene: | Pate4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.07e-86 | 1 |
vesicular gland | 3.07e-86 | 1 |
seminal fluid secreting gland | 3.07e-86 | 1 |
male accessory sex gland | 4.52e-44 | 2 |
sex gland | 4.52e-44 | 2 |
male reproductive gland | 4.52e-44 | 2 |
mesonephros | 6.52e-23 | 4 |
duct of male reproductive system | 6.52e-23 | 4 |
male genital duct | 6.52e-23 | 4 |
pronephros | 6.52e-23 | 4 |
internal male genitalia | 6.52e-23 | 4 |
nephrogenic cord | 6.52e-23 | 4 |
urogenital ridge | 6.52e-23 | 4 |
pronephric mesoderm | 6.52e-23 | 4 |
rostral part of nephrogenic cord | 6.52e-23 | 4 |
presumptive pronephric mesoderm | 6.52e-23 | 4 |
duct | 8.67e-14 | 7 |
internal genitalia | 4.56e-11 | 9 |
intraembryonic coelom | 4.12e-10 | 10 |
kidney | 1.22e-07 | 14 |
testis | 1.22e-07 | 14 |
kidney mesenchyme | 1.22e-07 | 14 |
upper urinary tract | 1.22e-07 | 14 |
intermediate mesoderm | 1.22e-07 | 14 |
kidney rudiment | 1.22e-07 | 14 |
kidney field | 1.22e-07 | 14 |
male reproductive organ | 3.18e-07 | 15 |
male organism | 7.35e-07 | 16 |
male reproductive system | 7.35e-07 | 16 |